RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 RAB7AP51149 207 aa18.33■□□□□ 0.52
TDP1-216ENST00000556867 EFNB2P52799 333 aa18.33■□□□□ 0.52
TDP1-216ENST00000556867 HTD2P86397 168 aa18.33■□□□□ 0.52
TDP1-216ENST00000556867 SLC25A48Q6ZT89 311 aaKnown RBP18.33■□□□□ 0.52
TDP1-216ENST00000556867 Q6ZTK2 550 aa18.33■□□□□ 0.52
TDP1-216ENST00000556867 C16orf82Q7Z2V1 217 aa18.33■□□□□ 0.52
TDP1-216ENST00000556867 OR8H3Q8N146 312 aa18.33■□□□□ 0.52
TDP1-216ENST00000556867 PTX4Q96A99 478 aa18.33■□□□□ 0.52
TDP1-216ENST00000556867 PECRQ9BY49 303 aa18.33■□□□□ 0.52
TDP1-216ENST00000556867 CHMP1AQ9HD42 196 aaPredicted RBP18.33■□□□□ 0.52
TDP1-216ENST00000556867 JPT1Q9UK76 154 aa18.33■□□□□ 0.52
TDP1-216ENST00000556867 FBN3Q75N90 2809 aa18.33■□□□□ 0.52
TDP1-216ENST00000556867 A0A0B4J203 849 aa18.32■□□□□ 0.52
TDP1-216ENST00000556867 LOC100506127A0A0U1RQW1 187 aa18.32■□□□□ 0.52
TDP1-216ENST00000556867 TRIM64CA6NLI5 447 aa18.32■□□□□ 0.52
TDP1-216ENST00000556867 SLC2A2P11168 524 aaPredicted RBP18.32■□□□□ 0.52
TDP1-216ENST00000556867 CD24P25063 80 aa18.32■□□□□ 0.52
TDP1-216ENST00000556867 ZNF816Q0VGE8 651 aaPredicted RBP18.32■□□□□ 0.52
TDP1-216ENST00000556867 DIAPH2-AS1Q14236 149 aa18.32■□□□□ 0.52
TDP1-216ENST00000556867 PLAC9Q5JTB6 97 aa18.32■□□□□ 0.52
TDP1-216ENST00000556867 C11orf88Q6PI97 169 aa18.32■□□□□ 0.52
TDP1-216ENST00000556867 Q8N2B8 174 aa18.32■□□□□ 0.52
TDP1-216ENST00000556867 OR10V1Q8NGI7 309 aa18.32■□□□□ 0.52
TDP1-216ENST00000556867 OR2T6Q8NHC8 308 aa18.32■□□□□ 0.52
TDP1-216ENST00000556867 SGMS2Q8NHU3 365 aa18.32■□□□□ 0.52
TDP1-216ENST00000556867 GALMQ96C23 342 aa18.32■□□□□ 0.52
TDP1-216ENST00000556867 CITED1Q99966 193 aa18.32■□□□□ 0.52
TDP1-216ENST00000556867 ZNF702PQ9H963 129 aa18.32■□□□□ 0.52
TDP1-216ENST00000556867 C12orf4Q9NQ89 552 aa18.32■□□□□ 0.52
TDP1-216ENST00000556867 OR2S2Q9NQN1 319 aa18.32■□□□□ 0.52
TDP1-216ENST00000556867 FAM90A9PA6NNJ1 464 aa18.31■□□□□ 0.52
TDP1-216ENST00000556867 HSD17B6O14756 317 aa18.31■□□□□ 0.52
TDP1-216ENST00000556867 TIMM23O14925 209 aa18.31■□□□□ 0.52
TDP1-216ENST00000556867 SLC31A2O15432 143 aa18.31■□□□□ 0.52
TDP1-216ENST00000556867 IL3RAP26951 378 aa18.31■□□□□ 0.52
TDP1-216ENST00000556867 SDC2P34741 201 aa18.31■□□□□ 0.52
TDP1-216ENST00000556867 FBLN7Q53RD9 439 aa18.31■□□□□ 0.52
TDP1-216ENST00000556867 STEAP3Q658P3 488 aa18.31■□□□□ 0.52
TDP1-216ENST00000556867 C5orf24Q7Z6I8 188 aa18.31■□□□□ 0.52
TDP1-216ENST00000556867 THNSL2Q86YJ6 484 aa18.31■□□□□ 0.52
TDP1-216ENST00000556867 CFHR4Q92496 578 aa18.31■□□□□ 0.52
TDP1-216ENST00000556867 HDHD3Q9BSH5 251 aaPredicted RBP18.31■□□□□ 0.52
TDP1-216ENST00000556867 ABRACLQ9P1F3 81 aa18.31■□□□□ 0.52
TDP1-216ENST00000556867 SIGLEC9Q9Y336 463 aa18.31■□□□□ 0.52
TDP1-216ENST00000556867 ZNF137PP52743 207 aa18.3■□□□□ 0.52
TDP1-216ENST00000556867 KRTAP10-3P60369 221 aa18.3■□□□□ 0.52
TDP1-216ENST00000556867 SRSF4Q08170 494 aaKnown RBP18.3■□□□□ 0.52
TDP1-216ENST00000556867 GNMTQ14749 295 aa18.3■□□□□ 0.52
TDP1-216ENST00000556867 TIMM50Q3ZCQ8 353 aa18.3■□□□□ 0.52
TDP1-216ENST00000556867 MORN2Q502X0 79 aa18.3■□□□□ 0.52
TDP1-216ENST00000556867 CT45A1Q5HYN5 189 aa18.3■□□□□ 0.52
TDP1-216ENST00000556867 SFXN4Q6P4A7 337 aa18.3■□□□□ 0.52
TDP1-216ENST00000556867 DRAM1Q8N682 238 aa18.3■□□□□ 0.52
TDP1-216ENST00000556867 OR52L2PQ8NGH6 319 aa18.3■□□□□ 0.52
TDP1-216ENST00000556867 OR56B4Q8NH76 319 aa18.3■□□□□ 0.52
TDP1-216ENST00000556867 CT45A3Q8NHU0 189 aa18.3■□□□□ 0.52
TDP1-216ENST00000556867 ST6GALNAC6Q969X2 333 aa18.3■□□□□ 0.52
TDP1-216ENST00000556867 RAB3CQ96E17 227 aa18.3■□□□□ 0.52
TDP1-216ENST00000556867 AKR1E2Q96JD6 320 aa18.3■□□□□ 0.52
TDP1-216ENST00000556867 CENPOQ9BU64 300 aa18.3■□□□□ 0.52
TDP1-216ENST00000556867 RNF167Q9H6Y7 350 aa18.3■□□□□ 0.52
TDP1-216ENST00000556867 MGAT4AQ9UM21 535 aa18.3■□□□□ 0.52
TDP1-216ENST00000556867 RAB27BO00194 218 aa18.29■□□□□ 0.52
TDP1-216ENST00000556867 YPEL1O60688 119 aa18.29■□□□□ 0.52
TDP1-216ENST00000556867 OR2F2O95006 317 aa18.29■□□□□ 0.52
TDP1-216ENST00000556867 GAPDHP04406 335 aaKnown RBP18.29■□□□□ 0.52
TDP1-216ENST00000556867 FAM106CPP0CH98 169 aa18.29■□□□□ 0.52
TDP1-216ENST00000556867 ZNF134P52741 427 aa18.29■□□□□ 0.52
TDP1-216ENST00000556867 HABP2Q14520 560 aaPredicted RBP18.29■□□□□ 0.52
TDP1-216ENST00000556867 MOGAT2Q3SYC2 334 aa18.29■□□□□ 0.52
TDP1-216ENST00000556867 LY6G6FQ5SQ64 297 aa18.29■□□□□ 0.52
TDP1-216ENST00000556867 OR10R2Q8NGX6 335 aa18.29■□□□□ 0.52
TDP1-216ENST00000556867 SETD6Q8TBK2 473 aa18.29■□□□□ 0.52
TDP1-216ENST00000556867 CAPSLQ8WWF8 208 aa18.29■□□□□ 0.52
TDP1-216ENST00000556867 YIPF6Q96EC8 236 aa18.29■□□□□ 0.52
TDP1-216ENST00000556867 RBM14Q96PK6 669 aaKnown RBP18.29■□□□□ 0.52
TDP1-216ENST00000556867 YPEL2Q96QA6 119 aa18.29■□□□□ 0.52
TDP1-216ENST00000556867 CMSS1Q9BQ75 279 aaKnown RBP18.29■□□□□ 0.52
TDP1-216ENST00000556867 SLC25A33Q9BSK2 321 aa18.29■□□□□ 0.52
TDP1-216ENST00000556867 PRSS22Q9GZN4 317 aa18.29■□□□□ 0.52
TDP1-216ENST00000556867 DAPK2Q9UIK4 370 aa18.29■□□□□ 0.52
TDP1-216ENST00000556867 KCNK7Q9Y2U2 307 aa18.29■□□□□ 0.52
TDP1-216ENST00000556867 METTL21EPA6NDL7 271 aa18.28■□□□□ 0.52
TDP1-216ENST00000556867 PPP1CCP36873 323 aaKnown RBP18.28■□□□□ 0.52
TDP1-216ENST00000556867 Q9N2K0 584 aa18.28■□□□□ 0.52
TDP1-216ENST00000556867 IGHV1-3A0A0C4DH29 117 aa18.27■□□□□ 0.52
TDP1-216ENST00000556867 MFNGO00587 321 aa18.27■□□□□ 0.52
TDP1-216ENST00000556867 RGS11O94810 467 aa18.27■□□□□ 0.52
TDP1-216ENST00000556867 SNRNP70P08621 437 aaKnown RBP18.27■□□□□ 0.52
TDP1-216ENST00000556867 CLEC2LP0C7M8 214 aa18.27■□□□□ 0.52
TDP1-216ENST00000556867 HIST1H1DP16402 221 aaKnown RBP18.27■□□□□ 0.52
TDP1-216ENST00000556867 REG1BP48304 166 aa18.27■□□□□ 0.52
TDP1-216ENST00000556867 HLA-DRB3P79483 266 aa18.27■□□□□ 0.52
TDP1-216ENST00000556867 MXD1Q05195 221 aa18.27■□□□□ 0.52
TDP1-216ENST00000556867 RTN4IP1Q8WWV3 396 aaPredicted RBP18.27■□□□□ 0.52
TDP1-216ENST00000556867 ABHD14AQ9BUJ0 271 aa18.27■□□□□ 0.52
TDP1-216ENST00000556867 TRRAPQ9Y4A5 3859 aa18.26■□□□□ 0.51
TDP1-216ENST00000556867 TXNL1O43396 289 aa18.26■□□□□ 0.51
TDP1-216ENST00000556867 BLCAPP62952 87 aa18.26■□□□□ 0.51
TDP1-216ENST00000556867 IZUMO1Q8IYV9 350 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms