RNA–Protein interactions for RNA: ENST00000556689.5

SHMT2-223, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-223ENST00000556689 MED22Q15528 200 aa9.83□□□□□ -0.84
SHMT2-223ENST00000556689 RNLSQ5VYX0 342 aa9.83□□□□□ -0.84
SHMT2-223ENST00000556689 FAM53AQ6NSI3 398 aaPredicted RBP9.83□□□□□ -0.84
SHMT2-223ENST00000556689 ZNF367Q7RTV3 350 aa9.83□□□□□ -0.84
SHMT2-223ENST00000556689 OR52N1Q8NH53 320 aa9.83□□□□□ -0.84
SHMT2-223ENST00000556689 ARL11Q969Q4 196 aa9.83□□□□□ -0.84
SHMT2-223ENST00000556689 OR5B12Q96R08 314 aa9.83□□□□□ -0.84
SHMT2-223ENST00000556689 DPCDQ9BVM2 203 aaPredicted RBP9.83□□□□□ -0.84
SHMT2-223ENST00000556689 GHITMQ9H3K2 345 aa9.83□□□□□ -0.84
SHMT2-223ENST00000556689 ISYNA1Q9NPH2 558 aa9.83□□□□□ -0.84
SHMT2-223ENST00000556689 ERVK13-1Q9NX77 482 aa9.83□□□□□ -0.84
SHMT2-223ENST00000556689 ZNF107Q9UII5 783 aaPredicted RBP9.83□□□□□ -0.84
SHMT2-223ENST00000556689 C15orf65H3BRN8 121 aa9.82□□□□□ -0.84
SHMT2-223ENST00000556689 J3QLW9 94 aa9.82□□□□□ -0.84
SHMT2-223ENST00000556689 MAGEB3O15480 346 aa9.82□□□□□ -0.84
SHMT2-223ENST00000556689 SAP30O75446 220 aa9.82□□□□□ -0.84
SHMT2-223ENST00000556689 ZNF19P17023 458 aa9.82□□□□□ -0.84
SHMT2-223ENST00000556689 PPIFP30405 207 aaKnown RBP9.82□□□□□ -0.84
SHMT2-223ENST00000556689 GBX2P52951 348 aaPredicted RBP9.82□□□□□ -0.84
SHMT2-223ENST00000556689 GNB1P62873 340 aa9.82□□□□□ -0.84
SHMT2-223ENST00000556689 RSU1Q15404 277 aa9.82□□□□□ -0.84
SHMT2-223ENST00000556689 PIGYQ3MUY2 71 aa9.82□□□□□ -0.84
SHMT2-223ENST00000556689 LAIR2Q6ISS4 152 aa9.82□□□□□ -0.84
SHMT2-223ENST00000556689 SATL1Q86VE3 508 aa9.82□□□□□ -0.84
SHMT2-223ENST00000556689 SYS1Q8N2H4 156 aa9.82□□□□□ -0.84
SHMT2-223ENST00000556689 PARP16Q8N5Y8 322 aa9.82□□□□□ -0.84
SHMT2-223ENST00000556689 SUMF2Q8NBJ7 301 aa9.82□□□□□ -0.84
SHMT2-223ENST00000556689 CPNE2Q96FN4 548 aaPredicted RBP9.82□□□□□ -0.84
SHMT2-223ENST00000556689 GPER1Q99527 375 aa9.82□□□□□ -0.84
SHMT2-223ENST00000556689 GFOD1Q9NXC2 390 aa9.82□□□□□ -0.84
SHMT2-223ENST00000556689 WSB1Q9Y6I7 421 aa9.82□□□□□ -0.84
SHMT2-223ENST00000556689 TMEM30CPA0ZSE6 113 aa9.81□□□□□ -0.84
SHMT2-223ENST00000556689 J3QRE1 110 aa9.81□□□□□ -0.84
SHMT2-223ENST00000556689 LDLRAD4O15165 306 aa9.81□□□□□ -0.84
SHMT2-223ENST00000556689 TXNL1O43396 289 aa9.81□□□□□ -0.84
SHMT2-223ENST00000556689 NOL3O60936 208 aaKnown RBP9.81□□□□□ -0.84
SHMT2-223ENST00000556689 HTR3BO95264 441 aa9.81□□□□□ -0.84
SHMT2-223ENST00000556689 IGLV1-40P01703 118 aa9.81□□□□□ -0.84
SHMT2-223ENST00000556689 RAB9AP51151 201 aa9.81□□□□□ -0.84
SHMT2-223ENST00000556689 NEDD8Q15843 81 aa9.81□□□□□ -0.84
SHMT2-223ENST00000556689 LHFPL3Q86UP9 236 aa9.81□□□□□ -0.84
SHMT2-223ENST00000556689 OR6Q1Q8NGQ2 317 aa9.81□□□□□ -0.84
SHMT2-223ENST00000556689 OR10K1Q8NGX5 313 aa9.81□□□□□ -0.84
SHMT2-223ENST00000556689 TNFAIP8L1Q8WVP5 186 aa9.81□□□□□ -0.84
SHMT2-223ENST00000556689 DLX4Q92988 240 aaPredicted RBP9.81□□□□□ -0.84
SHMT2-223ENST00000556689 ISOC1Q96CN7 298 aa9.81□□□□□ -0.84
SHMT2-223ENST00000556689 RBMXL1Q96E39 390 aaKnown RBP9.81□□□□□ -0.84
SHMT2-223ENST00000556689 PELI1Q96FA3 418 aa9.81□□□□□ -0.84
SHMT2-223ENST00000556689 C4orf36Q96KX1 117 aa9.81□□□□□ -0.84
SHMT2-223ENST00000556689 TM2D3Q9BRN9 247 aa9.81□□□□□ -0.84
SHMT2-223ENST00000556689 OR51J1Q9H342 316 aa9.81□□□□□ -0.84
SHMT2-223ENST00000556689 PAK1IP1Q9NWT1 392 aaPredicted RBP9.81□□□□□ -0.84
SHMT2-223ENST00000556689 ST3GAL6Q9Y274 331 aa9.81□□□□□ -0.84
SHMT2-223ENST00000556689 STARD9Q9P2P6 4700 aa9.8□□□□□ -0.84
SHMT2-223ENST00000556689 IGHV3-43A0A0B4J1X8 118 aa9.8□□□□□ -0.84
SHMT2-223ENST00000556689 FAM90A10PA6NDY2 464 aa9.8□□□□□ -0.84
SHMT2-223ENST00000556689 TRIM64CA6NLI5 447 aa9.8□□□□□ -0.84
SHMT2-223ENST00000556689 G3V318 75 aa9.8□□□□□ -0.84
SHMT2-223ENST00000556689 GABRPO00591 440 aa9.8□□□□□ -0.84
SHMT2-223ENST00000556689 ORC5O43913 435 aa9.8□□□□□ -0.84
SHMT2-223ENST00000556689 OR7C1O76099 320 aaPredicted RBP9.8□□□□□ -0.84
SHMT2-223ENST00000556689 HSMCR30P0CW71 290 aa9.8□□□□□ -0.84
SHMT2-223ENST00000556689 IGHV3-43DP0DP04 118 aa9.8□□□□□ -0.84
SHMT2-223ENST00000556689 SLC2A2P11168 524 aaPredicted RBP9.8□□□□□ -0.84
SHMT2-223ENST00000556689 RAB3AP20336 220 aa9.8□□□□□ -0.84
SHMT2-223ENST00000556689 PSMB9P28065 219 aa9.8□□□□□ -0.84
SHMT2-223ENST00000556689 ETV1P50549 477 aa9.8□□□□□ -0.84
SHMT2-223ENST00000556689 ZNF137PP52743 207 aa9.8□□□□□ -0.84
SHMT2-223ENST00000556689 SPHARQ15513 63 aa9.8□□□□□ -0.84
SHMT2-223ENST00000556689 Q3ZCU0 254 aa9.8□□□□□ -0.84
SHMT2-223ENST00000556689 ASCL4Q6XD76 172 aa9.8□□□□□ -0.84
SHMT2-223ENST00000556689 ADAMTSL5Q6ZMM2 481 aa9.8□□□□□ -0.84
SHMT2-223ENST00000556689 SLC25A48Q6ZT89 311 aaKnown RBP9.8□□□□□ -0.84
SHMT2-223ENST00000556689 SPARTQ8N0X7 666 aa9.8□□□□□ -0.84
SHMT2-223ENST00000556689 UBALD1Q8TB05 177 aa9.8□□□□□ -0.84
SHMT2-223ENST00000556689 CCDC107Q8WV48 283 aa9.8□□□□□ -0.84
SHMT2-223ENST00000556689 UFD1Q92890 307 aa9.8□□□□□ -0.84
SHMT2-223ENST00000556689 FAM192AQ9GZU8 254 aa9.8□□□□□ -0.84
SHMT2-223ENST00000556689 IFT22Q9H7X7 185 aa9.8□□□□□ -0.84
SHMT2-223ENST00000556689 EDA2RQ9HAV5 297 aa9.8□□□□□ -0.84
SHMT2-223ENST00000556689 ACOT13Q9NPJ3 140 aa9.8□□□□□ -0.84
SHMT2-223ENST00000556689 ZNF581Q9P0T4 197 aa9.8□□□□□ -0.84
SHMT2-223ENST00000556689 DHDHQ9UQ10 334 aa9.8□□□□□ -0.84
SHMT2-223ENST00000556689 SORL1Q92673 2214 aa9.79□□□□□ -0.84
SHMT2-223ENST00000556689 HYDINQ4G0P3 5121 aa9.79□□□□□ -0.84
SHMT2-223ENST00000556689 LINC01619G3V211 115 aa9.79□□□□□ -0.84
SHMT2-223ENST00000556689 SLC31A2O15432 143 aa9.79□□□□□ -0.84
SHMT2-223ENST00000556689 MT-ND4P03905 459 aa9.79□□□□□ -0.84
SHMT2-223ENST00000556689 LIMS3P0CW19 117 aa9.79□□□□□ -0.84
SHMT2-223ENST00000556689 LIMS4P0CW20 117 aa9.79□□□□□ -0.84
SHMT2-223ENST00000556689 VEGFCP49767 419 aa9.79□□□□□ -0.84
SHMT2-223ENST00000556689 MMDQ15546 238 aa9.79□□□□□ -0.84
SHMT2-223ENST00000556689 CCDC58Q4VC31 144 aa9.79□□□□□ -0.84
SHMT2-223ENST00000556689 ACSM6Q6P461 480 aa9.79□□□□□ -0.84
SHMT2-223ENST00000556689 NANOGP1Q8N7R0 232 aa9.79□□□□□ -0.84
SHMT2-223ENST00000556689 THRSPQ92748 146 aa9.79□□□□□ -0.84
SHMT2-223ENST00000556689 ING4Q9UNL4 249 aa9.79□□□□□ -0.84
SHMT2-223ENST00000556689 TRAV41A0A0B4J266 112 aa9.78□□□□□ -0.84
SHMT2-223ENST00000556689 TMEM212A6NML5 194 aa9.78□□□□□ -0.84
SHMT2-223ENST00000556689 ATP6V0E1O15342 81 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms