RNA–Protein interactions for RNA: ENST00000556501.1

GPHN-213, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-213ENST00000556501 ASCL3Q9NQ33 180 aa4.56□□□□□ -1.68
GPHN-213ENST00000556501 TUBG2Q9NRH3 451 aa4.56□□□□□ -1.68
GPHN-213ENST00000556501 SMCO4Q9NRQ5 59 aa4.56□□□□□ -1.68
GPHN-213ENST00000556501 MBNL3Q9NUK0 354 aaKnown RBP4.56□□□□□ -1.68
GPHN-213ENST00000556501 ERRFI1Q9UJM3 462 aaPredicted RBP4.56□□□□□ -1.68
GPHN-213ENST00000556501 PRELID1Q9Y255 219 aa4.56□□□□□ -1.68
GPHN-213ENST00000556501 POLR3KQ9Y2Y1 108 aaPredicted RBP4.56□□□□□ -1.68
GPHN-213ENST00000556501 FAM186AA6NE01 2351 aa4.56□□□□□ -1.68
GPHN-213ENST00000556501 CHD3Q12873 2000 aaKnown RBP4.55□□□□□ -1.68
GPHN-213ENST00000556501 TRAV17A0A0B4J275 112 aa4.55□□□□□ -1.68
GPHN-213ENST00000556501 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.55□□□□□ -1.68
GPHN-213ENST00000556501 A0A1B0GWJ7 208 aa4.55□□□□□ -1.68
GPHN-213ENST00000556501 TMEM30CPA0ZSE6 113 aa4.55□□□□□ -1.68
GPHN-213ENST00000556501 COLCA2A8K830 154 aa4.55□□□□□ -1.68
GPHN-213ENST00000556501 RNF212BA8MTL3 300 aa4.55□□□□□ -1.68
GPHN-213ENST00000556501 PRR33A8MZF0 331 aa4.55□□□□□ -1.68
GPHN-213ENST00000556501 C1QTNF9BB2RNN3 333 aa4.55□□□□□ -1.68
GPHN-213ENST00000556501 TXNL1O43396 289 aa4.55□□□□□ -1.68
GPHN-213ENST00000556501 TNFSF12O43508 249 aa4.55□□□□□ -1.68
GPHN-213ENST00000556501 CHST1O43916 411 aa4.55□□□□□ -1.68
GPHN-213ENST00000556501 LYZL6O75951 148 aa4.55□□□□□ -1.68
GPHN-213ENST00000556501 DFFBO76075 338 aa4.55□□□□□ -1.68
GPHN-213ENST00000556501 HAND1O96004 215 aa4.55□□□□□ -1.68
GPHN-213ENST00000556501 IGKV1-5P01602 117 aa4.55□□□□□ -1.68
GPHN-213ENST00000556501 IGKV3-15P01624 115 aa4.55□□□□□ -1.68
GPHN-213ENST00000556501 IGLV2-14P01704 120 aa4.55□□□□□ -1.68
GPHN-213ENST00000556501 FTH1P19P0C7X4 201 aa4.55□□□□□ -1.68
GPHN-213ENST00000556501 KITLGP21583 273 aa4.55□□□□□ -1.68
GPHN-213ENST00000556501 EPHA1P21709 976 aa4.55□□□□□ -1.68
GPHN-213ENST00000556501 OMGP23515 440 aa4.55□□□□□ -1.68
GPHN-213ENST00000556501 NFYBP25208 207 aa4.55□□□□□ -1.68
GPHN-213ENST00000556501 HOXC12P31275 282 aa4.55□□□□□ -1.68
GPHN-213ENST00000556501 SULT1A1P50225 295 aa4.55□□□□□ -1.68
GPHN-213ENST00000556501 ASCL1P50553 236 aa4.55□□□□□ -1.68
GPHN-213ENST00000556501 RPL23AP62750 156 aaKnown RBP4.55□□□□□ -1.68
GPHN-213ENST00000556501 PSG7Q13046 419 aa4.55□□□□□ -1.68
GPHN-213ENST00000556501 RHEBQ15382 184 aa4.55□□□□□ -1.68
GPHN-213ENST00000556501 AWAT1Q58HT5 328 aa4.55□□□□□ -1.68
GPHN-213ENST00000556501 SP5Q6BEB4 398 aaPredicted RBP4.55□□□□□ -1.68
GPHN-213ENST00000556501 SPSB3Q6PJ21 355 aa4.55□□□□□ -1.68
GPHN-213ENST00000556501 IGF2-ASQ6U949 168 aa4.55□□□□□ -1.68
GPHN-213ENST00000556501 STX12Q86Y82 276 aa4.55□□□□□ -1.68
GPHN-213ENST00000556501 THNSL2Q86YJ6 484 aa4.55□□□□□ -1.68
GPHN-213ENST00000556501 GCNT2Q8N0V5 402 aa4.55□□□□□ -1.68
GPHN-213ENST00000556501 C15orf54Q8N8G6 183 aa4.55□□□□□ -1.68
GPHN-213ENST00000556501 WDR31Q8NA23 367 aa4.55□□□□□ -1.68
GPHN-213ENST00000556501 OR1J1Q8NGS3 322 aa4.55□□□□□ -1.68
GPHN-213ENST00000556501 OR10Z1Q8NGY1 313 aa4.55□□□□□ -1.68
GPHN-213ENST00000556501 OR2G3Q8NGZ4 309 aa4.55□□□□□ -1.68
GPHN-213ENST00000556501 RNASE11Q8TAA1 199 aaKnown RBP4.55□□□□□ -1.68
GPHN-213ENST00000556501 KLF14Q8TD94 323 aaPredicted RBP4.55□□□□□ -1.68
GPHN-213ENST00000556501 RXFP4Q8TDU9 374 aa4.55□□□□□ -1.68
GPHN-213ENST00000556501 IL1F10Q8WWZ1 152 aa4.55□□□□□ -1.68
GPHN-213ENST00000556501 TRIB1Q96RU8 372 aa4.55□□□□□ -1.68
GPHN-213ENST00000556501 EGLN1Q9GZT9 426 aa4.55□□□□□ -1.68
GPHN-213ENST00000556501 SLC35B3Q9H1N7 401 aa4.55□□□□□ -1.68
GPHN-213ENST00000556501 CXXC4Q9H2H0 198 aa4.55□□□□□ -1.68
GPHN-213ENST00000556501 KIAA1456Q9P272 454 aa4.55□□□□□ -1.68
GPHN-213ENST00000556501 MLXQ9UH92 298 aa4.55□□□□□ -1.68
GPHN-213ENST00000556501 TRAPPC2LQ9UL33 140 aa4.55□□□□□ -1.68
GPHN-213ENST00000556501 KCNS2Q9ULS6 477 aa4.55□□□□□ -1.68
GPHN-213ENST00000556501 PCNX2A6NKB5 2137 aa4.55□□□□□ -1.68
GPHN-213ENST00000556501 PTPRBP23467 1997 aa4.54□□□□□ -1.68
GPHN-213ENST00000556501 KNTC1P50748 2209 aa4.54□□□□□ -1.68
GPHN-213ENST00000556501 OTOGLQ3ZCN5 2332 aa4.54□□□□□ -1.68
GPHN-213ENST00000556501 TRAV1-1A0A0B4J248 108 aa4.54□□□□□ -1.68
GPHN-213ENST00000556501 TRAV39A0A0B4J263 110 aa4.54□□□□□ -1.68
GPHN-213ENST00000556501 MEX3AA1L020 520 aaKnown RBP4.54□□□□□ -1.68
GPHN-213ENST00000556501 C7orf77A4D0Y5 90 aa4.54□□□□□ -1.68
GPHN-213ENST00000556501 ZNF891A8MT65 544 aaPredicted RBP4.54□□□□□ -1.68
GPHN-213ENST00000556501 FAM90A26D6RGX4 464 aa4.54□□□□□ -1.68
GPHN-213ENST00000556501 H0YL77 283 aa4.54□□□□□ -1.68
GPHN-213ENST00000556501 CDIPTO14735 213 aa4.54□□□□□ -1.68
GPHN-213ENST00000556501 NKX2-8O15522 239 aa4.54□□□□□ -1.68
GPHN-213ENST00000556501 MLNRO43193 412 aa4.54□□□□□ -1.68
GPHN-213ENST00000556501 PPIHO43447 177 aaKnown RBP4.54□□□□□ -1.68
GPHN-213ENST00000556501 SYNGR2O43760 224 aa4.54□□□□□ -1.68
GPHN-213ENST00000556501 CST7O76096 145 aa4.54□□□□□ -1.68
GPHN-213ENST00000556501 IFNA5P01569 189 aa4.54□□□□□ -1.68
GPHN-213ENST00000556501 IGLV1-44P01699 117 aa4.54□□□□□ -1.68
GPHN-213ENST00000556501 HBE1P02100 147 aa4.54□□□□□ -1.68
GPHN-213ENST00000556501 OR8U8P0C7N1 319 aa4.54□□□□□ -1.68
GPHN-213ENST00000556501 P0C879 139 aa4.54□□□□□ -1.68
GPHN-213ENST00000556501 KIR2DL2P43627 348 aaPredicted RBP4.54□□□□□ -1.68
GPHN-213ENST00000556501 TAS2R30P59541 319 aa4.54□□□□□ -1.68
GPHN-213ENST00000556501 PAX5Q02548 391 aa4.54□□□□□ -1.68
GPHN-213ENST00000556501 EIF4EBP1Q13541 118 aaPredicted RBP4.54□□□□□ -1.68
GPHN-213ENST00000556501 ACSF3Q4G176 576 aaPredicted RBP4.54□□□□□ -1.68
GPHN-213ENST00000556501 ZNF585BQ52M93 769 aa4.54□□□□□ -1.68
GPHN-213ENST00000556501 ZNF506Q5JVG8 444 aa4.54□□□□□ -1.68
GPHN-213ENST00000556501 AKR1C8PQ5T2L2 129 aa4.54□□□□□ -1.68
GPHN-213ENST00000556501 SLC35E4Q6ICL7 350 aa4.54□□□□□ -1.68
GPHN-213ENST00000556501 VWA1Q6PCB0 445 aa4.54□□□□□ -1.68
GPHN-213ENST00000556501 C11orf53Q8IXP5 236 aa4.54□□□□□ -1.68
GPHN-213ENST00000556501 DRAM1Q8N682 238 aa4.54□□□□□ -1.68
GPHN-213ENST00000556501 ZNF525Q8N782 197 aa4.54□□□□□ -1.68
GPHN-213ENST00000556501 ZNF645Q8N7E2 425 aa4.54□□□□□ -1.68
GPHN-213ENST00000556501 C9orf106Q8NAJ2 232 aa4.54□□□□□ -1.68
GPHN-213ENST00000556501 ZBTB34Q8NCN2 500 aa4.54□□□□□ -1.68
GPHN-213ENST00000556501 DEFB124Q8NES8 71 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms