RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 S100A2P29034 98 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 GNRHRP30968 328 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 SRD5A2P31213 254 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 SNCAP37840 140 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 PMELP40967 661 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 PTGDSP41222 190 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 KIR2DS4P43632 304 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 NKX2-1P43699 371 aaPredicted RBP3.76□□□□□ -1.81
ATXN3-241ENST00000556374 UCP3P55916 312 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 TMEM50BP56557 158 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 TMEM33P57088 247 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 CCL7P80098 99 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 EWSR1Q01844 656 aaKnown RBP eCLIP3.76□□□□□ -1.81
ATXN3-241ENST00000556374 TLE4Q04727 773 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 IL11RAQ14626 422 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 KIR2DS1Q14954 304 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 UBE2V2Q15819 145 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 TAF9Q16594 264 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 RNF212Q495C1 297 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 HES3Q5TGS1 186 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 OR2A2Q6IF42 318 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 GUSBP11Q6P575 273 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 DPPA3Q6W0C5 159 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 LINC00596Q86U02 117 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 RTN4RL2Q86UN3 420 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 STX12Q86Y82 276 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 C20orf196Q8IYI0 205 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 ZNF100Q8IYN0 542 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 CMTM1Q8IZ96 169 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 TMEM123Q8N131 208 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 LRTM2Q8N967 370 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 HSD17B11Q8NBQ5 300 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 NAXEQ8NCW5 288 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 OR8U1Q8NH10 309 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 C2CD4CQ8TF44 421 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 SSC4DQ8WTU2 575 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 DNASE2BQ8WZ79 361 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 SLAMF9Q96A28 289 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 NABP1Q96AH0 204 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 MOB3AQ96BX8 217 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 RBMXL1Q96E39 390 aaKnown RBP3.76□□□□□ -1.81
ATXN3-241ENST00000556374 GALNT14Q96FL9 552 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 LYZL4Q96KX0 146 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 ALKBH3Q96Q83 286 aaPredicted RBP3.76□□□□□ -1.81
ATXN3-241ENST00000556374 HIST1H2AAQ96QV6 131 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 ZNF251Q9BRH9 671 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 FAAP24Q9BTP7 215 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 C1orf43Q9BWL3 253 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 PAPOLGQ9BWT3 736 aaKnown RBP3.76□□□□□ -1.81
ATXN3-241ENST00000556374 ANGPTL4Q9BY76 406 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 SLC35B3Q9H1N7 401 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 OPA3Q9H6K4 179 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 SPACA1Q9HBV2 294 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 TMEM38BQ9NVV0 291 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 ABI3Q9P2A4 366 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 B4GALT7Q9UBV7 327 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 MCTS1Q9ULC4 181 aaKnown RBP3.76□□□□□ -1.81
ATXN3-241ENST00000556374 ST3GAL6Q9Y274 331 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 PTRH2Q9Y3E5 179 aaKnown RBP3.76□□□□□ -1.81
ATXN3-241ENST00000556374 CHCHD2Q9Y6H1 151 aaPredicted RBP3.76□□□□□ -1.81
ATXN3-241ENST00000556374 NF1P21359 2839 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 SPG11Q96JI7 2443 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 OTOGQ6ZRI0 2925 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 SPENQ96T58 3664 aaKnown RBP3.76□□□□□ -1.81
ATXN3-241ENST00000556374 CENPEQ02224 2701 aa3.76□□□□□ -1.81
ATXN3-241ENST00000556374 MPDZO75970 2070 aa3.75□□□□□ -1.81
ATXN3-241ENST00000556374 LOC102723996A0A087X1L8 192 aa3.75□□□□□ -1.81
ATXN3-241ENST00000556374 IGHV1-45A0A0A0MS14 117 aa3.75□□□□□ -1.81
ATXN3-241ENST00000556374 IGHV5-10-1A0A0J9YXX1 117 aa3.75□□□□□ -1.81
ATXN3-241ENST00000556374 C3orf85A0A1B0GTC6 90 aa3.75□□□□□ -1.81
ATXN3-241ENST00000556374 A6NLC8 198 aa3.75□□□□□ -1.81
ATXN3-241ENST00000556374 ZNF814B7Z6K7 855 aa3.75□□□□□ -1.81
ATXN3-241ENST00000556374 TRDCB7Z8K6 153 aa3.75□□□□□ -1.81
ATXN3-241ENST00000556374 TRAPPC2LH3BP13 241 aa3.75□□□□□ -1.81
ATXN3-241ENST00000556374 RPL36A-HNRNPH2H7BZ11 118 aa3.75□□□□□ -1.81
ATXN3-241ENST00000556374 TGOLN2O43493 480 aa3.75□□□□□ -1.81
ATXN3-241ENST00000556374 SPRY1O43609 319 aaPredicted RBP3.75□□□□□ -1.81
ATXN3-241ENST00000556374 SSSCA1O60232 199 aa3.75□□□□□ -1.81
ATXN3-241ENST00000556374 OR2C1O95371 312 aa3.75□□□□□ -1.81
ATXN3-241ENST00000556374 SYNGR4O95473 234 aa3.75□□□□□ -1.81
ATXN3-241ENST00000556374 PPYP01298 95 aa3.75□□□□□ -1.81
ATXN3-241ENST00000556374 MBPP02686 304 aaPredicted RBP3.75□□□□□ -1.81
ATXN3-241ENST00000556374 CD5P06127 495 aa3.75□□□□□ -1.81
ATXN3-241ENST00000556374 DANCRP0C864 163 aa3.75□□□□□ -1.81
ATXN3-241ENST00000556374 FAM157CP0CG43 387 aa3.75□□□□□ -1.81
ATXN3-241ENST00000556374 FGF5P12034 268 aa3.75□□□□□ -1.81
ATXN3-241ENST00000556374 B4GALT1P15291 398 aa3.75□□□□□ -1.81
ATXN3-241ENST00000556374 RAB5AP20339 215 aa3.75□□□□□ -1.81
ATXN3-241ENST00000556374 FUT3P21217 361 aa3.75□□□□□ -1.81
ATXN3-241ENST00000556374 AADACP22760 399 aa3.75□□□□□ -1.81
ATXN3-241ENST00000556374 NFYBP25208 207 aa3.75□□□□□ -1.81
ATXN3-241ENST00000556374 GDF1P27539 372 aa3.75□□□□□ -1.81
ATXN3-241ENST00000556374 OTX1P32242 354 aaPredicted RBP3.75□□□□□ -1.81
ATXN3-241ENST00000556374 OPRM1P35372 400 aa3.75□□□□□ -1.81
ATXN3-241ENST00000556374 CEBPGP53567 150 aa3.75□□□□□ -1.81
ATXN3-241ENST00000556374 CLDN15P56746 228 aa3.75□□□□□ -1.81
ATXN3-241ENST00000556374 RBM11P57052 281 aaKnown RBP3.75□□□□□ -1.81
ATXN3-241ENST00000556374 CARD18P57730 90 aa3.75□□□□□ -1.81
ATXN3-241ENST00000556374 RND3P61587 244 aa3.75□□□□□ -1.81
ATXN3-241ENST00000556374 B2MP61769 119 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms