RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 KLHL22Q53GT1 634 aa6.95□□□□□ -1.3
GTF2A1-204ENST00000556268 ASCL4Q6XD76 172 aa6.95□□□□□ -1.3
GTF2A1-204ENST00000556268 SPATA24Q86W54 205 aa6.95□□□□□ -1.3
GTF2A1-204ENST00000556268 LINC00311Q8N616 119 aa6.95□□□□□ -1.3
GTF2A1-204ENST00000556268 C8orf31Q8N9H6 132 aa6.95□□□□□ -1.3
GTF2A1-204ENST00000556268 Q8N9W7 124 aa6.95□□□□□ -1.3
GTF2A1-204ENST00000556268 TMEM104Q8NE00 496 aa6.95□□□□□ -1.3
GTF2A1-204ENST00000556268 OR8J1Q8NGP2 316 aa6.95□□□□□ -1.3
GTF2A1-204ENST00000556268 OR13A1Q8NGR1 328 aa6.95□□□□□ -1.3
GTF2A1-204ENST00000556268 OR8U1Q8NH10 309 aa6.95□□□□□ -1.3
GTF2A1-204ENST00000556268 RFESDQ8TAC1 157 aa6.95□□□□□ -1.3
GTF2A1-204ENST00000556268 MYOZ3Q8TDC0 251 aa6.95□□□□□ -1.3
GTF2A1-204ENST00000556268 LEAP2Q969E1 77 aa6.95□□□□□ -1.3
GTF2A1-204ENST00000556268 ST6GALNAC6Q969X2 333 aa6.95□□□□□ -1.3
GTF2A1-204ENST00000556268 RFT1Q96AA3 541 aa6.95□□□□□ -1.3
GTF2A1-204ENST00000556268 EME1Q96AY2 570 aa6.95□□□□□ -1.3
GTF2A1-204ENST00000556268 SPACA5Q96QH8 159 aa6.95□□□□□ -1.3
GTF2A1-204ENST00000556268 KRT84Q9NSB2 600 aa6.95□□□□□ -1.3
GTF2A1-204ENST00000556268 LIN7CQ9NUP9 197 aaKnown RBP6.95□□□□□ -1.3
GTF2A1-204ENST00000556268 CALYQ9NYX4 217 aa6.95□□□□□ -1.3
GTF2A1-204ENST00000556268 KIF25Q9UIL4 384 aa6.95□□□□□ -1.3
GTF2A1-204ENST00000556268 ZNF580Q9UK33 172 aa6.95□□□□□ -1.3
GTF2A1-204ENST00000556268 POMPQ9Y244 141 aa6.95□□□□□ -1.3
GTF2A1-204ENST00000556268 SIRT4Q9Y6E7 314 aaPredicted RBP6.95□□□□□ -1.3
GTF2A1-204ENST00000556268 EPPK1P58107 5090 aaKnown RBP6.95□□□□□ -1.3
GTF2A1-204ENST00000556268 MEIKINA0A087WXM9 373 aa6.94□□□□□ -1.3
GTF2A1-204ENST00000556268 IGHV1-3A0A0C4DH29 117 aa6.94□□□□□ -1.3
GTF2A1-204ENST00000556268 SEC14L6B5MCN3 397 aa6.94□□□□□ -1.3
GTF2A1-204ENST00000556268 G3V2T6 193 aa6.94□□□□□ -1.3
GTF2A1-204ENST00000556268 MPZL2O60487 215 aa6.94□□□□□ -1.3
GTF2A1-204ENST00000556268 IGHV3-7P01780 117 aa6.94□□□□□ -1.3
GTF2A1-204ENST00000556268 IGF1P05019 195 aa6.94□□□□□ -1.3
GTF2A1-204ENST00000556268 GZMHP20718 246 aa6.94□□□□□ -1.3
GTF2A1-204ENST00000556268 PSMB8P28062 276 aa6.94□□□□□ -1.3
GTF2A1-204ENST00000556268 CD1BP29016 333 aa6.94□□□□□ -1.3
GTF2A1-204ENST00000556268 VHLP40337 213 aa6.94□□□□□ -1.3
GTF2A1-204ENST00000556268 KCNJ3P48549 501 aa6.94□□□□□ -1.3
GTF2A1-204ENST00000556268 INSL3P51460 131 aa6.94□□□□□ -1.3
GTF2A1-204ENST00000556268 RUNX1Q01196 453 aa6.94□□□□□ -1.3
GTF2A1-204ENST00000556268 FLOT2Q14254 428 aa6.94□□□□□ -1.3
GTF2A1-204ENST00000556268 ATXN7L3Q14CW9 347 aaPredicted RBP6.94□□□□□ -1.3
GTF2A1-204ENST00000556268 KISS1Q15726 138 aa6.94□□□□□ -1.3
GTF2A1-204ENST00000556268 DEFB136Q30KP8 78 aa6.94□□□□□ -1.3
GTF2A1-204ENST00000556268 TP53I3Q53FA7 332 aa6.94□□□□□ -1.3
GTF2A1-204ENST00000556268 CXorf66Q5JRM2 361 aaPredicted RBP6.94□□□□□ -1.3
GTF2A1-204ENST00000556268 SLC25A30Q5SVS4 291 aa6.94□□□□□ -1.3
GTF2A1-204ENST00000556268 RSBN1Q5VWQ0 802 aaPredicted RBP6.94□□□□□ -1.3
GTF2A1-204ENST00000556268 SBSPONQ8IVN8 264 aa6.94□□□□□ -1.3
GTF2A1-204ENST00000556268 FAM71E2Q8N5Q1 922 aa6.94□□□□□ -1.3
GTF2A1-204ENST00000556268 PXT1Q8NFP0 134 aa6.94□□□□□ -1.3
GTF2A1-204ENST00000556268 OR51A4Q8NGJ6 313 aa6.94□□□□□ -1.3
GTF2A1-204ENST00000556268 OR52M1Q8NGK5 317 aa6.94□□□□□ -1.3
GTF2A1-204ENST00000556268 OR10AC1Q8NH08 325 aa6.94□□□□□ -1.3
GTF2A1-204ENST00000556268 CNIH3Q8TBE1 160 aa6.94□□□□□ -1.3
GTF2A1-204ENST00000556268 TRUB1Q8WWH5 349 aaKnown RBP6.94□□□□□ -1.3
GTF2A1-204ENST00000556268 CHCHD6Q9BRQ6 235 aa6.94□□□□□ -1.3
GTF2A1-204ENST00000556268 MGAT4CQ9UBM8 478 aa6.94□□□□□ -1.3
GTF2A1-204ENST00000556268 GNG8Q9UK08 70 aa6.94□□□□□ -1.3
GTF2A1-204ENST00000556268 ZNF256Q9Y2P7 627 aaPredicted RBP6.94□□□□□ -1.3
GTF2A1-204ENST00000556268 LYSTQ99698 3801 aa6.94□□□□□ -1.3
GTF2A1-204ENST00000556268 H0YJX3 145 aa6.93□□□□□ -1.3
GTF2A1-204ENST00000556268 C15orf65H3BRN8 121 aa6.93□□□□□ -1.3
GTF2A1-204ENST00000556268 TMEM225BP0DP42 221 aa6.93□□□□□ -1.3
GTF2A1-204ENST00000556268 ATP6V1E1P36543 226 aa6.93□□□□□ -1.3
GTF2A1-204ENST00000556268 BNIP1Q12981 228 aa6.93□□□□□ -1.3
GTF2A1-204ENST00000556268 IL13RA2Q14627 380 aa6.93□□□□□ -1.3
GTF2A1-204ENST00000556268 ATP6AP1Q15904 470 aa6.93□□□□□ -1.3
GTF2A1-204ENST00000556268 TMEM65Q6PI78 240 aa6.93□□□□□ -1.3
GTF2A1-204ENST00000556268 SERPINA12Q8IW75 414 aa6.93□□□□□ -1.3
GTF2A1-204ENST00000556268 PARP16Q8N5Y8 322 aa6.93□□□□□ -1.3
GTF2A1-204ENST00000556268 OR8H1Q8NGG4 311 aa6.93□□□□□ -1.3
GTF2A1-204ENST00000556268 OR5D18Q8NGL1 313 aa6.93□□□□□ -1.3
GTF2A1-204ENST00000556268 OR5D14Q8NGL3 314 aa6.93□□□□□ -1.3
GTF2A1-204ENST00000556268 OR10X1Q8NGY0 326 aa6.93□□□□□ -1.3
GTF2A1-204ENST00000556268 OR2T10Q8NGZ9 312 aa6.93□□□□□ -1.3
GTF2A1-204ENST00000556268 PLPPR1Q8TBJ4 325 aa6.93□□□□□ -1.3
GTF2A1-204ENST00000556268 C4orf3Q8WVX3 66 aa6.93□□□□□ -1.3
GTF2A1-204ENST00000556268 S1PR3Q99500 378 aa6.93□□□□□ -1.3
GTF2A1-204ENST00000556268 GABARAPL1Q9H0R8 117 aa6.93□□□□□ -1.3
GTF2A1-204ENST00000556268 ENOPH1Q9UHY7 261 aa6.93□□□□□ -1.3
GTF2A1-204ENST00000556268 SMAD5-AS1Q9Y6J3 95 aa6.93□□□□□ -1.3
GTF2A1-204ENST00000556268 CSMD3Q7Z407 3707 aa6.92□□□□□ -1.3
GTF2A1-204ENST00000556268 A0A1W2PPE3 182 aa6.92□□□□□ -1.3
GTF2A1-204ENST00000556268 FAM90A10PA6NDY2 464 aa6.92□□□□□ -1.3
GTF2A1-204ENST00000556268 NCBP2LA6PVI3 153 aaKnown RBP6.92□□□□□ -1.3
GTF2A1-204ENST00000556268 ZNF736B4DX44 427 aaPredicted RBP6.92□□□□□ -1.3
GTF2A1-204ENST00000556268 I3L521 148 aa6.92□□□□□ -1.3
GTF2A1-204ENST00000556268 HSD17B6O14756 317 aa6.92□□□□□ -1.3
GTF2A1-204ENST00000556268 MOSP00540 346 aa6.92□□□□□ -1.3
GTF2A1-204ENST00000556268 RPSAP08865 295 aaKnown RBP6.92□□□□□ -1.3
GTF2A1-204ENST00000556268 ZNF137PP52743 207 aa6.92□□□□□ -1.3
GTF2A1-204ENST00000556268 F2RL1P55085 397 aa6.92□□□□□ -1.3
GTF2A1-204ENST00000556268 RAB25P57735 213 aa6.92□□□□□ -1.3
GTF2A1-204ENST00000556268 ALKBH1Q13686 389 aaKnown RBP6.92□□□□□ -1.3
GTF2A1-204ENST00000556268 ZNF260Q3ZCT1 412 aa6.92□□□□□ -1.3
GTF2A1-204ENST00000556268 Q3ZCU0 254 aa6.92□□□□□ -1.3
GTF2A1-204ENST00000556268 PAN3Q58A45 887 aaKnown RBP6.92□□□□□ -1.3
GTF2A1-204ENST00000556268 ASPHD1Q5U4P2 390 aa6.92□□□□□ -1.3
GTF2A1-204ENST00000556268 ZNF691Q5VV52 312 aa6.92□□□□□ -1.3
GTF2A1-204ENST00000556268 FAM220AQ7Z4H9 259 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms