RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 HMGN3Q15651 99 aa12.18□□□□□ -0.46
ACTN1-217ENST00000556203 Q3ZCU0 254 aa12.18□□□□□ -0.46
ACTN1-217ENST00000556203 FBLN7Q53RD9 439 aa12.18□□□□□ -0.46
ACTN1-217ENST00000556203 PLAC9Q5JTB6 97 aa12.18□□□□□ -0.46
ACTN1-217ENST00000556203 Q6ZPA2 131 aa12.18□□□□□ -0.46
ACTN1-217ENST00000556203 TPRA1Q86W33 373 aa12.18□□□□□ -0.46
ACTN1-217ENST00000556203 LINC00311Q8N616 119 aa12.18□□□□□ -0.46
ACTN1-217ENST00000556203 OR52L2PQ8NGH6 319 aa12.18□□□□□ -0.46
ACTN1-217ENST00000556203 OR56B4Q8NH76 319 aa12.18□□□□□ -0.46
ACTN1-217ENST00000556203 OR2T6Q8NHC8 308 aa12.18□□□□□ -0.46
ACTN1-217ENST00000556203 CAPSLQ8WWF8 208 aa12.18□□□□□ -0.46
ACTN1-217ENST00000556203 KCTD7Q96MP8 289 aa12.18□□□□□ -0.46
ACTN1-217ENST00000556203 OCSTAMPQ9BR26 566 aa12.18□□□□□ -0.46
ACTN1-217ENST00000556203 HDHD3Q9BSH5 251 aaPredicted RBP12.18□□□□□ -0.46
ACTN1-217ENST00000556203 PECRQ9BY49 303 aa12.18□□□□□ -0.46
ACTN1-217ENST00000556203 RNF167Q9H6Y7 350 aa12.18□□□□□ -0.46
ACTN1-217ENST00000556203 VCX3AQ9NNX9 186 aa12.18□□□□□ -0.46
ACTN1-217ENST00000556203 HSD17B6O14756 317 aa12.17□□□□□ -0.46
ACTN1-217ENST00000556203 FAM106CPP0CH98 169 aa12.17□□□□□ -0.46
ACTN1-217ENST00000556203 RAB6AP20340 208 aa12.17□□□□□ -0.46
ACTN1-217ENST00000556203 IL3RAP26951 378 aa12.17□□□□□ -0.46
ACTN1-217ENST00000556203 SDC2P34741 201 aa12.17□□□□□ -0.46
ACTN1-217ENST00000556203 REG1BP48304 166 aa12.17□□□□□ -0.46
ACTN1-217ENST00000556203 RAB7AP51149 207 aa12.17□□□□□ -0.46
ACTN1-217ENST00000556203 ZNF134P52741 427 aa12.17□□□□□ -0.46
ACTN1-217ENST00000556203 GNMTQ14749 295 aa12.17□□□□□ -0.46
ACTN1-217ENST00000556203 MOGAT2Q3SYC2 334 aa12.17□□□□□ -0.46
ACTN1-217ENST00000556203 ZNF880Q6PDB4 577 aa12.17□□□□□ -0.46
ACTN1-217ENST00000556203 MOB1BQ7L9L4 216 aa12.17□□□□□ -0.46
ACTN1-217ENST00000556203 DRAM1Q8N682 238 aa12.17□□□□□ -0.46
ACTN1-217ENST00000556203 ZNF439Q8NDP4 499 aa12.17□□□□□ -0.46
ACTN1-217ENST00000556203 SGMS2Q8NHU3 365 aa12.17□□□□□ -0.46
ACTN1-217ENST00000556203 GALMQ96C23 342 aa12.17□□□□□ -0.46
ACTN1-217ENST00000556203 CITED1Q99966 193 aa12.17□□□□□ -0.46
ACTN1-217ENST00000556203 CENPOQ9BU64 300 aa12.17□□□□□ -0.46
ACTN1-217ENST00000556203 RIMS4Q9H426 269 aaPredicted RBP12.17□□□□□ -0.46
ACTN1-217ENST00000556203 ZNF696Q9H7X3 374 aa12.17□□□□□ -0.46
ACTN1-217ENST00000556203 ZNF702PQ9H963 129 aa12.17□□□□□ -0.46
ACTN1-217ENST00000556203 ABRACLQ9P1F3 81 aa12.17□□□□□ -0.46
ACTN1-217ENST00000556203 JPT1Q9UK76 154 aa12.17□□□□□ -0.46
ACTN1-217ENST00000556203 TRBV6-6A0A0A6YYG2 114 aa12.16□□□□□ -0.46
ACTN1-217ENST00000556203 SNRNP70P08621 437 aaKnown RBP12.16□□□□□ -0.46
ACTN1-217ENST00000556203 CLEC2LP0C7M8 214 aa12.16□□□□□ -0.46
ACTN1-217ENST00000556203 PPP1CCP36873 323 aaKnown RBP12.16□□□□□ -0.46
ACTN1-217ENST00000556203 BLCAPP62952 87 aa12.16□□□□□ -0.46
ACTN1-217ENST00000556203 HTD2P86397 168 aa12.16□□□□□ -0.46
ACTN1-217ENST00000556203 ZNF816Q0VGE8 651 aaPredicted RBP12.16□□□□□ -0.46
ACTN1-217ENST00000556203 HABP2Q14520 560 aaPredicted RBP12.16□□□□□ -0.46
ACTN1-217ENST00000556203 MORN2Q502X0 79 aa12.16□□□□□ -0.46
ACTN1-217ENST00000556203 CT45A1Q5HYN5 189 aa12.16□□□□□ -0.46
ACTN1-217ENST00000556203 SFXN4Q6P4A7 337 aa12.16□□□□□ -0.46
ACTN1-217ENST00000556203 SLC25A48Q6ZT89 311 aaKnown RBP12.16□□□□□ -0.46
ACTN1-217ENST00000556203 C16orf82Q7Z2V1 217 aa12.16□□□□□ -0.46
ACTN1-217ENST00000556203 OR8H3Q8N146 312 aa12.16□□□□□ -0.46
ACTN1-217ENST00000556203 Q8N2B8 174 aa12.16□□□□□ -0.46
ACTN1-217ENST00000556203 DTX3Q8N9I9 347 aa12.16□□□□□ -0.46
ACTN1-217ENST00000556203 CT45A3Q8NHU0 189 aa12.16□□□□□ -0.46
ACTN1-217ENST00000556203 IL1F10Q8WWZ1 152 aa12.16□□□□□ -0.46
ACTN1-217ENST00000556203 RAB3CQ96E17 227 aa12.16□□□□□ -0.46
ACTN1-217ENST00000556203 CMSS1Q9BQ75 279 aaKnown RBP12.16□□□□□ -0.46
ACTN1-217ENST00000556203 SLC25A33Q9BSK2 321 aa12.16□□□□□ -0.46
ACTN1-217ENST00000556203 PRSS22Q9GZN4 317 aa12.16□□□□□ -0.46
ACTN1-217ENST00000556203 C12orf4Q9NQ89 552 aa12.16□□□□□ -0.46
ACTN1-217ENST00000556203 DAPK2Q9UIK4 370 aa12.16□□□□□ -0.46
ACTN1-217ENST00000556203 FAM90A9PA6NNJ1 464 aa12.15□□□□□ -0.46
ACTN1-217ENST00000556203 OR2F2O95006 317 aa12.15□□□□□ -0.46
ACTN1-217ENST00000556203 GAPDHP04406 335 aaKnown RBP12.15□□□□□ -0.46
ACTN1-217ENST00000556203 MXD1Q05195 221 aa12.15□□□□□ -0.46
ACTN1-217ENST00000556203 C11orf88Q6PI97 169 aa12.15□□□□□ -0.46
ACTN1-217ENST00000556203 MOB3BQ86TA1 216 aa12.15□□□□□ -0.46
ACTN1-217ENST00000556203 THNSL2Q86YJ6 484 aa12.15□□□□□ -0.46
ACTN1-217ENST00000556203 OR10R2Q8NGX6 335 aa12.15□□□□□ -0.46
ACTN1-217ENST00000556203 CFHR4Q92496 578 aa12.15□□□□□ -0.46
ACTN1-217ENST00000556203 ST6GALNAC6Q969X2 333 aa12.15□□□□□ -0.46
ACTN1-217ENST00000556203 PTX4Q96A99 478 aa12.15□□□□□ -0.46
ACTN1-217ENST00000556203 AKR1E2Q96JD6 320 aa12.15□□□□□ -0.46
ACTN1-217ENST00000556203 RBM14Q96PK6 669 aaKnown RBP12.15□□□□□ -0.46
ACTN1-217ENST00000556203 ABHD14AQ9BUJ0 271 aa12.15□□□□□ -0.46
ACTN1-217ENST00000556203 KCNK7Q9Y2U2 307 aa12.15□□□□□ -0.46
ACTN1-217ENST00000556203 IGHV3-72A0A0B4J1Y9 119 aa12.14□□□□□ -0.47
ACTN1-217ENST00000556203 IGHV1-3A0A0C4DH29 117 aa12.14□□□□□ -0.47
ACTN1-217ENST00000556203 METTL21EPA6NDL7 271 aa12.14□□□□□ -0.47
ACTN1-217ENST00000556203 RAB27BO00194 218 aa12.14□□□□□ -0.47
ACTN1-217ENST00000556203 YPEL1O60688 119 aa12.14□□□□□ -0.47
ACTN1-217ENST00000556203 RGS11O94810 467 aa12.14□□□□□ -0.47
ACTN1-217ENST00000556203 SNRPBP14678 240 aaKnown RBP12.14□□□□□ -0.47
ACTN1-217ENST00000556203 GNB3P16520 340 aa12.14□□□□□ -0.47
ACTN1-217ENST00000556203 HES1Q14469 280 aa12.14□□□□□ -0.47
ACTN1-217ENST00000556203 TIMM50Q3ZCQ8 353 aa12.14□□□□□ -0.47
ACTN1-217ENST00000556203 STEAP3Q658P3 488 aa12.14□□□□□ -0.47
ACTN1-217ENST00000556203 Q6ZS46 218 aa12.14□□□□□ -0.47
ACTN1-217ENST00000556203 LYG1Q8N1E2 194 aa12.14□□□□□ -0.47
ACTN1-217ENST00000556203 KLHDC1Q8N7A1 406 aa12.14□□□□□ -0.47
ACTN1-217ENST00000556203 YIPF6Q96EC8 236 aa12.14□□□□□ -0.47
ACTN1-217ENST00000556203 YPEL2Q96QA6 119 aa12.14□□□□□ -0.47
ACTN1-217ENST00000556203 ATG5Q9H1Y0 275 aa12.14□□□□□ -0.47
ACTN1-217ENST00000556203 Q9N2K0 584 aa12.14□□□□□ -0.47
ACTN1-217ENST00000556203 MGAT4AQ9UM21 535 aa12.14□□□□□ -0.47
ACTN1-217ENST00000556203 A0A075B6Q4 140 aa12.13□□□□□ -0.47
ACTN1-217ENST00000556203 MFNGO00587 321 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms