RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 OR10V1Q8NGI7 309 aa11.11□□□□□ -0.63
CHMP4BP1-201ENST00000556017 OR1N2Q8NGR9 330 aa11.11□□□□□ -0.63
CHMP4BP1-201ENST00000556017 OR4K15Q8NH41 348 aa11.11□□□□□ -0.63
CHMP4BP1-201ENST00000556017 DCUN1D4Q92564 292 aa11.11□□□□□ -0.63
CHMP4BP1-201ENST00000556017 MRPL48Q96GC5 212 aaKnown RBP11.11□□□□□ -0.63
CHMP4BP1-201ENST00000556017 RCHY1Q96PM5 261 aa11.11□□□□□ -0.63
CHMP4BP1-201ENST00000556017 OR5B12Q96R08 314 aa11.11□□□□□ -0.63
CHMP4BP1-201ENST00000556017 ALX4Q9H161 411 aaPredicted RBP11.11□□□□□ -0.63
CHMP4BP1-201ENST00000556017 SMAD5-AS1Q9Y6J3 95 aa11.11□□□□□ -0.63
CHMP4BP1-201ENST00000556017 SNTNA6NMZ2 147 aa11.1□□□□□ -0.63
CHMP4BP1-201ENST00000556017 SC5DO75845 299 aa11.1□□□□□ -0.63
CHMP4BP1-201ENST00000556017 HLA-DRB1P01911 266 aa11.1□□□□□ -0.63
CHMP4BP1-201ENST00000556017 SNRPBP14678 240 aaKnown RBP11.1□□□□□ -0.63
CHMP4BP1-201ENST00000556017 MYF6P23409 242 aa11.1□□□□□ -0.63
CHMP4BP1-201ENST00000556017 IL3RAP26951 378 aa11.1□□□□□ -0.63
CHMP4BP1-201ENST00000556017 BDKRB2P30411 391 aa11.1□□□□□ -0.63
CHMP4BP1-201ENST00000556017 INSL3P51460 131 aa11.1□□□□□ -0.63
CHMP4BP1-201ENST00000556017 ZNF616Q08AN1 781 aa11.1□□□□□ -0.63
CHMP4BP1-201ENST00000556017 DOC2BQ14184 412 aa11.1□□□□□ -0.63
CHMP4BP1-201ENST00000556017 CCDC58Q4VC31 144 aa11.1□□□□□ -0.63
CHMP4BP1-201ENST00000556017 MORN2Q502X0 79 aa11.1□□□□□ -0.63
CHMP4BP1-201ENST00000556017 STEAP3Q658P3 488 aa11.1□□□□□ -0.63
CHMP4BP1-201ENST00000556017 RPL22L1Q6P5R6 122 aaKnown RBP11.1□□□□□ -0.63
CHMP4BP1-201ENST00000556017 ZNF485Q8NCK3 441 aa11.1□□□□□ -0.63
CHMP4BP1-201ENST00000556017 ZNF184Q99676 751 aaPredicted RBP11.1□□□□□ -0.63
CHMP4BP1-201ENST00000556017 CHCHD6Q9BRQ6 235 aa11.1□□□□□ -0.63
CHMP4BP1-201ENST00000556017 OR51J1Q9H342 316 aa11.1□□□□□ -0.63
CHMP4BP1-201ENST00000556017 MBNL3Q9NUK0 354 aaKnown RBP11.1□□□□□ -0.63
CHMP4BP1-201ENST00000556017 CSTBP04080 98 aaKnown RBP11.09□□□□□ -0.63
CHMP4BP1-201ENST00000556017 CD2P06729 351 aa11.09□□□□□ -0.63
CHMP4BP1-201ENST00000556017 OR8U8P0C7N1 319 aa11.09□□□□□ -0.63
CHMP4BP1-201ENST00000556017 FRMD6-AS1P0C7T7 363 aa11.09□□□□□ -0.63
CHMP4BP1-201ENST00000556017 GTF2F2P13984 249 aa11.09□□□□□ -0.63
CHMP4BP1-201ENST00000556017 SPNP16150 400 aa11.09□□□□□ -0.63
CHMP4BP1-201ENST00000556017 BLVRBP30043 206 aaPredicted RBP11.09□□□□□ -0.63
CHMP4BP1-201ENST00000556017 RAB9AP51151 201 aa11.09□□□□□ -0.63
CHMP4BP1-201ENST00000556017 ACTBP60709 375 aa11.09□□□□□ -0.63
CHMP4BP1-201ENST00000556017 MMDQ15546 238 aa11.09□□□□□ -0.63
CHMP4BP1-201ENST00000556017 OVCH2Q7RTZ1 564 aa11.09□□□□□ -0.63
CHMP4BP1-201ENST00000556017 DLX4Q92988 240 aaPredicted RBP11.09□□□□□ -0.63
CHMP4BP1-201ENST00000556017 SMIM19Q96E16 107 aa11.09□□□□□ -0.63
CHMP4BP1-201ENST00000556017 NABP2Q9BQ15 211 aa11.09□□□□□ -0.63
CHMP4BP1-201ENST00000556017 MRPL20Q9BYC9 149 aaKnown RBP11.09□□□□□ -0.63
CHMP4BP1-201ENST00000556017 ANKRD60Q9BZ19 345 aa11.09□□□□□ -0.63
CHMP4BP1-201ENST00000556017 ISYNA1Q9NPH2 558 aa11.09□□□□□ -0.63
CHMP4BP1-201ENST00000556017 CLEC2DQ9UHP7 191 aa11.09□□□□□ -0.63
CHMP4BP1-201ENST00000556017 VSIG4Q9Y279 399 aa11.09□□□□□ -0.63
CHMP4BP1-201ENST00000556017 ORC6Q9Y5N6 252 aa11.09□□□□□ -0.63
CHMP4BP1-201ENST00000556017 TRBV5-7A0A0A0MS05 114 aa11.08□□□□□ -0.64
CHMP4BP1-201ENST00000556017 LOC100130705A0A1B0GUX0 176 aa11.08□□□□□ -0.64
CHMP4BP1-201ENST00000556017 TRIM64CA6NLI5 447 aa11.08□□□□□ -0.64
CHMP4BP1-201ENST00000556017 OR5H8P0DN80 308 aa11.08□□□□□ -0.64
CHMP4BP1-201ENST00000556017 EGR2P11161 476 aaPredicted RBP11.08□□□□□ -0.64
CHMP4BP1-201ENST00000556017 RASSF2P50749 326 aa11.08□□□□□ -0.64
CHMP4BP1-201ENST00000556017 CRIP2P52943 208 aaPredicted RBP11.08□□□□□ -0.64
CHMP4BP1-201ENST00000556017 RIPK1Q13546 671 aa11.08□□□□□ -0.64
CHMP4BP1-201ENST00000556017 C5orf64Q2M2E5 130 aa11.08□□□□□ -0.64
CHMP4BP1-201ENST00000556017 TMEM30BQ3MIR4 351 aa11.08□□□□□ -0.64
CHMP4BP1-201ENST00000556017 C6orf141Q5SZD1 244 aa11.08□□□□□ -0.64
CHMP4BP1-201ENST00000556017 DMKNQ6E0U4 476 aaPredicted RBP11.08□□□□□ -0.64
CHMP4BP1-201ENST00000556017 RAB12Q6IQ22 244 aa11.08□□□□□ -0.64
CHMP4BP1-201ENST00000556017 NPBQ8NG41 125 aa11.08□□□□□ -0.64
CHMP4BP1-201ENST00000556017 OR52L2PQ8NGH6 319 aa11.08□□□□□ -0.64
CHMP4BP1-201ENST00000556017 NEK7Q8TDX7 302 aa11.08□□□□□ -0.64
CHMP4BP1-201ENST00000556017 PGLYRP3Q96LB9 341 aa11.08□□□□□ -0.64
CHMP4BP1-201ENST00000556017 Q96MT0 163 aa11.08□□□□□ -0.64
CHMP4BP1-201ENST00000556017 RDH12Q96NR8 316 aa11.08□□□□□ -0.64
CHMP4BP1-201ENST00000556017 TAF9BQ9HBM6 251 aa11.08□□□□□ -0.64
CHMP4BP1-201ENST00000556017 PAK1IP1Q9NWT1 392 aaPredicted RBP11.08□□□□□ -0.64
CHMP4BP1-201ENST00000556017 ETAA1Q9NY74 926 aa11.08□□□□□ -0.64
CHMP4BP1-201ENST00000556017 GNG12Q9UBI6 72 aa11.08□□□□□ -0.64
CHMP4BP1-201ENST00000556017 BIRC6Q9NR09 4857 aa11.07□□□□□ -0.64
CHMP4BP1-201ENST00000556017 OVOL1O14753 267 aa11.07□□□□□ -0.64
CHMP4BP1-201ENST00000556017 SPINT2O43291 252 aa11.07□□□□□ -0.64
CHMP4BP1-201ENST00000556017 ZNF780AO75290 641 aaPredicted RBP11.07□□□□□ -0.64
CHMP4BP1-201ENST00000556017 NDUFA3O95167 84 aa11.07□□□□□ -0.64
CHMP4BP1-201ENST00000556017 LY86O95711 162 aa11.07□□□□□ -0.64
CHMP4BP1-201ENST00000556017 FSTP19883 344 aa11.07□□□□□ -0.64
CHMP4BP1-201ENST00000556017 PPP1CCP36873 323 aaKnown RBP11.07□□□□□ -0.64
CHMP4BP1-201ENST00000556017 OR3A3P47888 321 aa11.07□□□□□ -0.64
CHMP4BP1-201ENST00000556017 SLURP1P55000 103 aa11.07□□□□□ -0.64
CHMP4BP1-201ENST00000556017 ZNF833PQ6ZTB9 187 aa11.07□□□□□ -0.64
CHMP4BP1-201ENST00000556017 ZNF429Q86V71 674 aa11.07□□□□□ -0.64
CHMP4BP1-201ENST00000556017 PRR18Q8N4B5 295 aa11.07□□□□□ -0.64
CHMP4BP1-201ENST00000556017 MRPL30Q8TCC3 161 aaKnown RBP11.07□□□□□ -0.64
CHMP4BP1-201ENST00000556017 CASTOR1Q8WTX7 329 aa11.07□□□□□ -0.64
CHMP4BP1-201ENST00000556017 GHSRQ92847 366 aa11.07□□□□□ -0.64
CHMP4BP1-201ENST00000556017 MUL1Q969V5 352 aa11.07□□□□□ -0.64
CHMP4BP1-201ENST00000556017 Q96M66 194 aa11.07□□□□□ -0.64
CHMP4BP1-201ENST00000556017 MYCBPQ99417 103 aaPredicted RBP11.07□□□□□ -0.64
CHMP4BP1-201ENST00000556017 ZNF251Q9BRH9 671 aa11.07□□□□□ -0.64
CHMP4BP1-201ENST00000556017 TOLLIPQ9H0E2 274 aa11.07□□□□□ -0.64
CHMP4BP1-201ENST00000556017 BANF2Q9H503 90 aa11.07□□□□□ -0.64
CHMP4BP1-201ENST00000556017 PARP11Q9NR21 331 aa11.07□□□□□ -0.64
CHMP4BP1-201ENST00000556017 TRAPPC2LQ9UL33 140 aa11.07□□□□□ -0.64
CHMP4BP1-201ENST00000556017 RPL36Q9Y3U8 105 aaKnown RBP11.07□□□□□ -0.64
CHMP4BP1-201ENST00000556017 PEX16Q9Y5Y5 336 aa11.07□□□□□ -0.64
CHMP4BP1-201ENST00000556017 HYDINQ4G0P3 5121 aa11.06□□□□□ -0.64
CHMP4BP1-201ENST00000556017 IGHV4OR15-8A0A075B7B6 117 aa11.06□□□□□ -0.64
CHMP4BP1-201ENST00000556017 A0A087WW49 117 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms