RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 XKR8Q9H6D3 395 aa0.41□□□□□ -2.34
SRP54-207ENST00000555535 TDRD3Q9H7E2 651 aaKnown RBP0.41□□□□□ -2.34
SRP54-207ENST00000555535 VAPAQ9P0L0 249 aa0.41□□□□□ -2.34
SRP54-207ENST00000555535 MYO15BQ96JP2 1530 aa0.41□□□□□ -2.34
SRP54-207ENST00000555535 ROS1P08922 2347 aa0.41□□□□□ -2.34
SRP54-207ENST00000555535 NCOA6Q14686 2063 aaPredicted RBP0.41□□□□□ -2.34
SRP54-207ENST00000555535 PTPRJQ12913 1337 aa0.4□□□□□ -2.34
SRP54-207ENST00000555535 RTEL1-TNFRSF6BF6WH68 1400 aa0.4□□□□□ -2.34
SRP54-207ENST00000555535 EML5Q05BV3 1969 aa0.4□□□□□ -2.35
SRP54-207ENST00000555535 IGLV3-9A0A075B6K5 115 aa0.4□□□□□ -2.35
SRP54-207ENST00000555535 MUC21A0A0G2JKD1 596 aa0.4□□□□□ -2.35
SRP54-207ENST00000555535 MUC21A0A140T8X8 626 aa0.4□□□□□ -2.35
SRP54-207ENST00000555535 MDFIC2A0A1B0GVS7 189 aa0.4□□□□□ -2.35
SRP54-207ENST00000555535 C11orf86A6NJI1 115 aa0.4□□□□□ -2.35
SRP54-207ENST00000555535 C8orf87E5RJ46 101 aa0.4□□□□□ -2.35
SRP54-207ENST00000555535 H0YIV9 168 aa0.4□□□□□ -2.35
SRP54-207ENST00000555535 PSMD11O00231 422 aa0.4□□□□□ -2.35
SRP54-207ENST00000555535 CASC3O15234 703 aaKnown RBP0.4□□□□□ -2.35
SRP54-207ENST00000555535 KDELR3O43731 214 aa0.4□□□□□ -2.35
SRP54-207ENST00000555535 SHOX2O60902 331 aaPredicted RBP0.4□□□□□ -2.35
SRP54-207ENST00000555535 LY6HO94772 140 aa0.4□□□□□ -2.35
SRP54-207ENST00000555535 VAPBO95292 243 aa0.4□□□□□ -2.35
SRP54-207ENST00000555535 ANGP03950 147 aaKnown RBP0.4□□□□□ -2.35
SRP54-207ENST00000555535 ESDP10768 282 aa0.4□□□□□ -2.35
SRP54-207ENST00000555535 AKR1C4P17516 323 aa0.4□□□□□ -2.35
SRP54-207ENST00000555535 TSPOP30536 169 aa0.4□□□□□ -2.35
SRP54-207ENST00000555535 GTF2H1P32780 548 aa0.4□□□□□ -2.35
SRP54-207ENST00000555535 RCVRNP35243 200 aa0.4□□□□□ -2.35
SRP54-207ENST00000555535 AQP5P55064 265 aa0.4□□□□□ -2.35
SRP54-207ENST00000555535 SLC35A2P78381 396 aa0.4□□□□□ -2.35
SRP54-207ENST00000555535 ERHP84090 104 aaKnown RBP0.4□□□□□ -2.35
SRP54-207ENST00000555535 XIAPP98170 497 aa0.4□□□□□ -2.35
SRP54-207ENST00000555535 SPAG1Q07617 926 aa0.4□□□□□ -2.35
SRP54-207ENST00000555535 STK38Q15208 465 aa0.4□□□□□ -2.35
SRP54-207ENST00000555535 TPRXLQ17RH7 258 aa0.4□□□□□ -2.35
SRP54-207ENST00000555535 CAVIN4Q5BKX8 364 aa0.4□□□□□ -2.35
SRP54-207ENST00000555535 C2orf91Q6ZV80 131 aa0.4□□□□□ -2.35
SRP54-207ENST00000555535 PID1Q7Z2X4 250 aa0.4□□□□□ -2.35
SRP54-207ENST00000555535 GLT6D1Q7Z4J2 308 aa0.4□□□□□ -2.35
SRP54-207ENST00000555535 COA5Q86WW8 74 aa0.4□□□□□ -2.35
SRP54-207ENST00000555535 ZBTB8OSQ8IWT0 167 aa0.4□□□□□ -2.35
SRP54-207ENST00000555535 DEFB119Q8N690 84 aa0.4□□□□□ -2.35
SRP54-207ENST00000555535 OR11L1Q8NGX0 322 aa0.4□□□□□ -2.35
SRP54-207ENST00000555535 OR5P2Q8WZ92 322 aa0.4□□□□□ -2.35
SRP54-207ENST00000555535 LRRC39Q96DD0 335 aa0.4□□□□□ -2.35
SRP54-207ENST00000555535 MBOAT7Q96N66 472 aa0.4□□□□□ -2.35
SRP54-207ENST00000555535 NAP1L5Q96NT1 182 aaPredicted RBP0.4□□□□□ -2.35
SRP54-207ENST00000555535 BIRC8Q96P09 236 aa0.4□□□□□ -2.35
SRP54-207ENST00000555535 EBPLQ9BY08 206 aa0.4□□□□□ -2.35
SRP54-207ENST00000555535 SYT4Q9H2B2 425 aa0.4□□□□□ -2.35
SRP54-207ENST00000555535 C16orf95Q9H693 158 aa0.4□□□□□ -2.35
SRP54-207ENST00000555535 DMAC2Q9NW81 257 aa0.4□□□□□ -2.35
SRP54-207ENST00000555535 TXNL4BQ9NX01 149 aaKnown RBP0.4□□□□□ -2.35
SRP54-207ENST00000555535 STMN3Q9NZ72 180 aa0.4□□□□□ -2.35
SRP54-207ENST00000555535 CLEC2DQ9UHP7 191 aa0.4□□□□□ -2.35
SRP54-207ENST00000555535 DNAJC12Q9UKB3 198 aa0.4□□□□□ -2.35
SRP54-207ENST00000555535 SNX12Q9UMY4 172 aa0.4□□□□□ -2.35
SRP54-207ENST00000555535 BZW2Q9Y6E2 419 aaKnown RBP0.4□□□□□ -2.35
SRP54-207ENST00000555535 POLEQ07864 2286 aa0.4□□□□□ -2.35
SRP54-207ENST00000555535 ADAMTSL1Q8N6G6 1762 aa0.4□□□□□ -2.35
SRP54-207ENST00000555535 ZFC3H1O60293 1989 aaKnown RBP0.39□□□□□ -2.35
SRP54-207ENST00000555535 IGHV3-73A0A0B4J1V6 119 aa0.39□□□□□ -2.35
SRP54-207ENST00000555535 GOLGA6L7A0A1B0GV03 622 aa0.39□□□□□ -2.35
SRP54-207ENST00000555535 GOLGA8IPA6NC78 632 aa0.39□□□□□ -2.35
SRP54-207ENST00000555535 A8MUN3 132 aa0.39□□□□□ -2.35
SRP54-207ENST00000555535 UBDO15205 165 aa0.39□□□□□ -2.35
SRP54-207ENST00000555535 POLR3GO15318 223 aaPredicted RBP0.39□□□□□ -2.35
SRP54-207ENST00000555535 SOX14O95416 240 aa0.39□□□□□ -2.35
SRP54-207ENST00000555535 SNAP29O95721 258 aa0.39□□□□□ -2.35
SRP54-207ENST00000555535 NAPSAO96009 420 aa0.39□□□□□ -2.35
SRP54-207ENST00000555535 LTAP01374 205 aa0.39□□□□□ -2.35
SRP54-207ENST00000555535 FBP1P09467 338 aa0.39□□□□□ -2.35
SRP54-207ENST00000555535 ADORA1P30542 326 aa0.39□□□□□ -2.35
SRP54-207ENST00000555535 RPA3P35244 121 aaPredicted RBP0.39□□□□□ -2.35
SRP54-207ENST00000555535 SERPINB10P48595 397 aa0.39□□□□□ -2.35
SRP54-207ENST00000555535 DNASE1L1P49184 302 aa0.39□□□□□ -2.35
SRP54-207ENST00000555535 INPP1P49441 399 aa0.39□□□□□ -2.35
SRP54-207ENST00000555535 TNNC1P63316 161 aa0.39□□□□□ -2.35
SRP54-207ENST00000555535 ZBTB6Q15916 424 aa0.39□□□□□ -2.35
SRP54-207ENST00000555535 N4BP2L1Q5TBK1 243 aaPredicted RBP0.39□□□□□ -2.35
SRP54-207ENST00000555535 LAMTOR1Q6IAA8 161 aa0.39□□□□□ -2.35
SRP54-207ENST00000555535 FAM183BPQ6ZVS7 135 aa0.39□□□□□ -2.35
SRP54-207ENST00000555535 SSX6Q7RTT6 188 aa0.39□□□□□ -2.35
SRP54-207ENST00000555535 SYS1Q8N2H4 156 aa0.39□□□□□ -2.35
SRP54-207ENST00000555535 C10orf126Q8N4M7 172 aa0.39□□□□□ -2.35
SRP54-207ENST00000555535 YIPF7Q8N8F6 280 aa0.39□□□□□ -2.35
SRP54-207ENST00000555535 OR13C9Q8NGT0 318 aa0.39□□□□□ -2.35
SRP54-207ENST00000555535 GALMQ96C23 342 aa0.39□□□□□ -2.35
SRP54-207ENST00000555535 BCL7BQ9BQE9 202 aa0.39□□□□□ -2.35
SRP54-207ENST00000555535 PRSS27Q9BQR3 290 aa0.39□□□□□ -2.35
SRP54-207ENST00000555535 NAA38Q9BRA0 125 aaKnown RBP0.39□□□□□ -2.35
SRP54-207ENST00000555535 C11orf49Q9H6J7 331 aa0.39□□□□□ -2.35
SRP54-207ENST00000555535 METTL17Q9H7H0 456 aaPredicted RBP0.39□□□□□ -2.35
SRP54-207ENST00000555535 NDUFB11Q9NX14 153 aa0.39□□□□□ -2.35
SRP54-207ENST00000555535 FBXL3Q9UKT7 428 aa0.39□□□□□ -2.35
SRP54-207ENST00000555535 PSMD13Q9UNM6 376 aa0.39□□□□□ -2.35
SRP54-207ENST00000555535 EML6Q6ZMW3 1958 aa0.39□□□□□ -2.35
SRP54-207ENST00000555535 ABCB11O95342 1321 aa0.38□□□□□ -2.35
SRP54-207ENST00000555535 MUC5ACP98088 5654 aa0.38□□□□□ -2.35
SRP54-207ENST00000555535 EXPH5Q8NEV8 1989 aa0.38□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms