RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 LINC00311Q8N616 119 aa10.91□□□□□ -0.66
SNX6-203ENST00000555416 OR10X1Q8NGY0 326 aa10.91□□□□□ -0.66
SNX6-203ENST00000555416 WIPF2Q8TF74 440 aaPredicted RBP10.91□□□□□ -0.66
SNX6-203ENST00000555416 CAPSLQ8WWF8 208 aa10.91□□□□□ -0.66
SNX6-203ENST00000555416 RBM14Q96PK6 669 aaKnown RBP10.91□□□□□ -0.66
SNX6-203ENST00000555416 SLC25A33Q9BSK2 321 aa10.91□□□□□ -0.66
SNX6-203ENST00000555416 TXNL4BQ9NX01 149 aaKnown RBP10.91□□□□□ -0.66
SNX6-203ENST00000555416 STEAP1Q9UHE8 339 aa10.91□□□□□ -0.66
SNX6-203ENST00000555416 AK3Q9UIJ7 227 aa10.91□□□□□ -0.66
SNX6-203ENST00000555416 IFITM5A6NNB3 132 aa10.9□□□□□ -0.66
SNX6-203ENST00000555416 HSD17B6O14756 317 aa10.9□□□□□ -0.66
SNX6-203ENST00000555416 TSPAN15O95858 294 aa10.9□□□□□ -0.66
SNX6-203ENST00000555416 SLC2A2P11168 524 aaPredicted RBP10.9□□□□□ -0.66
SNX6-203ENST00000555416 PPP1CCP36873 323 aaKnown RBP10.9□□□□□ -0.66
SNX6-203ENST00000555416 HNF4GQ14541 408 aa10.9□□□□□ -0.66
SNX6-203ENST00000555416 HMGN3Q15651 99 aa10.9□□□□□ -0.66
SNX6-203ENST00000555416 MOGAT2Q3SYC2 334 aa10.9□□□□□ -0.66
SNX6-203ENST00000555416 KCTD21Q4G0X4 260 aa10.9□□□□□ -0.66
SNX6-203ENST00000555416 MORN2Q502X0 79 aa10.9□□□□□ -0.66
SNX6-203ENST00000555416 CCDC144NLQ6NUI1 221 aa10.9□□□□□ -0.66
SNX6-203ENST00000555416 ZNF880Q6PDB4 577 aa10.9□□□□□ -0.66
SNX6-203ENST00000555416 SLC25A48Q6ZT89 311 aaKnown RBP10.9□□□□□ -0.66
SNX6-203ENST00000555416 C8orf31Q8N9H6 132 aa10.9□□□□□ -0.66
SNX6-203ENST00000555416 FCGR1BQ92637 280 aa10.9□□□□□ -0.66
SNX6-203ENST00000555416 ARHGAP5-AS1Q96IT6 56 aa10.9□□□□□ -0.66
SNX6-203ENST00000555416 OCSTAMPQ9BR26 566 aa10.9□□□□□ -0.66
SNX6-203ENST00000555416 PECRQ9BY49 303 aa10.9□□□□□ -0.66
SNX6-203ENST00000555416 PRSS22Q9GZN4 317 aa10.9□□□□□ -0.66
SNX6-203ENST00000555416 PARP12Q9H0J9 701 aaKnown RBP10.9□□□□□ -0.66
SNX6-203ENST00000555416 OR51E2Q9H255 320 aa10.9□□□□□ -0.66
SNX6-203ENST00000555416 RNF167Q9H6Y7 350 aa10.9□□□□□ -0.66
SNX6-203ENST00000555416 LIN7BQ9HAP6 207 aa10.9□□□□□ -0.66
SNX6-203ENST00000555416 PLEKHJ1Q9NW61 149 aa10.9□□□□□ -0.66
SNX6-203ENST00000555416 GNG12Q9UBI6 72 aa10.9□□□□□ -0.66
SNX6-203ENST00000555416 KCNK7Q9Y2U2 307 aa10.9□□□□□ -0.66
SNX6-203ENST00000555416 IGHV1-3A0A0C4DH29 117 aa10.89□□□□□ -0.67
SNX6-203ENST00000555416 ZNF736B4DX44 427 aaPredicted RBP10.89□□□□□ -0.67
SNX6-203ENST00000555416 OR2F2O95006 317 aa10.89□□□□□ -0.67
SNX6-203ENST00000555416 RAB3BP20337 219 aa10.89□□□□□ -0.67
SNX6-203ENST00000555416 GALP22466 123 aa10.89□□□□□ -0.67
SNX6-203ENST00000555416 MYL9P24844 172 aa10.89□□□□□ -0.67
SNX6-203ENST00000555416 FGF9P31371 208 aaPredicted RBP10.89□□□□□ -0.67
SNX6-203ENST00000555416 MNDAP41218 407 aa10.89□□□□□ -0.67
SNX6-203ENST00000555416 RAB7AP51149 207 aa10.89□□□□□ -0.67
SNX6-203ENST00000555416 ZNF816Q0VGE8 651 aaPredicted RBP10.89□□□□□ -0.67
SNX6-203ENST00000555416 HERPUD1Q15011 391 aa10.89□□□□□ -0.67
SNX6-203ENST00000555416 NEDD8Q15843 81 aa10.89□□□□□ -0.67
SNX6-203ENST00000555416 ABCA11PQ4W5N1 156 aa10.89□□□□□ -0.67
SNX6-203ENST00000555416 TRAT1Q6PIZ9 186 aa10.89□□□□□ -0.67
SNX6-203ENST00000555416 THNSL2Q86YJ6 484 aa10.89□□□□□ -0.67
SNX6-203ENST00000555416 LYG1Q8N1E2 194 aa10.89□□□□□ -0.67
SNX6-203ENST00000555416 URM1Q9BTM9 101 aaKnown RBP10.89□□□□□ -0.67
SNX6-203ENST00000555416 WNT10AQ9GZT5 417 aa10.89□□□□□ -0.67
SNX6-203ENST00000555416 OR2S2Q9NQN1 319 aa10.89□□□□□ -0.67
SNX6-203ENST00000555416 STUB1Q9UNE7 303 aa10.89□□□□□ -0.67
SNX6-203ENST00000555416 H3BUI4 141 aa10.88□□□□□ -0.67
SNX6-203ENST00000555416 PDCD5O14737 125 aa10.88□□□□□ -0.67
SNX6-203ENST00000555416 IGKV1D-33P01593 117 aa10.88□□□□□ -0.67
SNX6-203ENST00000555416 IGKV1-33P01594 117 aa10.88□□□□□ -0.67
SNX6-203ENST00000555416 LPLP06858 475 aa10.88□□□□□ -0.67
SNX6-203ENST00000555416 CLEC2LP0C7M8 214 aa10.88□□□□□ -0.67
SNX6-203ENST00000555416 CD28P10747 220 aa10.88□□□□□ -0.67
SNX6-203ENST00000555416 ARHGDIBP52566 201 aa10.88□□□□□ -0.67
SNX6-203ENST00000555416 Q3ZCU0 254 aa10.88□□□□□ -0.67
SNX6-203ENST00000555416 TREML4Q6UXN2 200 aa10.88□□□□□ -0.67
SNX6-203ENST00000555416 C16orf82Q7Z2V1 217 aa10.88□□□□□ -0.67
SNX6-203ENST00000555416 MOB3BQ86TA1 216 aa10.88□□□□□ -0.67
SNX6-203ENST00000555416 ODF3L1Q8IXM7 274 aa10.88□□□□□ -0.67
SNX6-203ENST00000555416 OR8H3Q8N146 312 aa10.88□□□□□ -0.67
SNX6-203ENST00000555416 SETD6Q8TBK2 473 aa10.88□□□□□ -0.67
SNX6-203ENST00000555416 RTN4IP1Q8WWV3 396 aaPredicted RBP10.88□□□□□ -0.67
SNX6-203ENST00000555416 CHMP1AQ9HD42 196 aaPredicted RBP10.88□□□□□ -0.67
SNX6-203ENST00000555416 KCNIP1Q9NZI2 227 aa10.88□□□□□ -0.67
SNX6-203ENST00000555416 HSF4Q9ULV5 492 aa10.88□□□□□ -0.67
SNX6-203ENST00000555416 MEGF8Q7Z7M0 2845 aa10.88□□□□□ -0.67
SNX6-203ENST00000555416 CMYA5Q8N3K9 4069 aa10.88□□□□□ -0.67
SNX6-203ENST00000555416 TRBV6-6A0A0A6YYG2 114 aa10.87□□□□□ -0.67
SNX6-203ENST00000555416 GAPDHP04406 335 aaKnown RBP10.87□□□□□ -0.67
SNX6-203ENST00000555416 FAM106CPP0CH98 169 aa10.87□□□□□ -0.67
SNX6-203ENST00000555416 GADD45AP24522 165 aa10.87□□□□□ -0.67
SNX6-203ENST00000555416 PSMD7P51665 324 aa10.87□□□□□ -0.67
SNX6-203ENST00000555416 ZNF137PP52743 207 aa10.87□□□□□ -0.67
SNX6-203ENST00000555416 HTD2P86397 168 aa10.87□□□□□ -0.67
SNX6-203ENST00000555416 HES1Q14469 280 aa10.87□□□□□ -0.67
SNX6-203ENST00000555416 C10orf99Q6UWK7 81 aa10.87□□□□□ -0.67
SNX6-203ENST00000555416 Q6ZTK2 550 aa10.87□□□□□ -0.67
SNX6-203ENST00000555416 ZNF554Q86TJ5 538 aa10.87□□□□□ -0.67
SNX6-203ENST00000555416 IL1F10Q8WWZ1 152 aa10.87□□□□□ -0.67
SNX6-203ENST00000555416 CHCHD6Q9BRQ6 235 aa10.87□□□□□ -0.67
SNX6-203ENST00000555416 JPT1Q9UK76 154 aa10.87□□□□□ -0.67
SNX6-203ENST00000555416 RAB22AQ9UL26 194 aa10.87□□□□□ -0.67
SNX6-203ENST00000555416 TET2Q6N021 2002 aaPredicted RBP10.86□□□□□ -0.67
SNX6-203ENST00000555416 IGKV1-6A0A0C4DH72 117 aa10.86□□□□□ -0.67
SNX6-203ENST00000555416 ADARB2-AS1A8MUL3 147 aa10.86□□□□□ -0.67
SNX6-203ENST00000555416 RAB27BO00194 218 aa10.86□□□□□ -0.67
SNX6-203ENST00000555416 SCTP09683 121 aa10.86□□□□□ -0.67
SNX6-203ENST00000555416 TMEM11P17152 192 aa10.86□□□□□ -0.67
SNX6-203ENST00000555416 VDAC2P45880 294 aaPredicted RBP10.86□□□□□ -0.67
SNX6-203ENST00000555416 OR3A3P47888 321 aa10.86□□□□□ -0.67
SNX6-203ENST00000555416 EBI3Q14213 229 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms