RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 FABP1P07148 127 aa2.89□□□□□ -1.95
VRK1-205ENST00000555402 TSPOP30536 169 aa2.89□□□□□ -1.95
VRK1-205ENST00000555402 CBX5P45973 191 aa2.89□□□□□ -1.95
VRK1-205ENST00000555402 ZNF83P51522 516 aa2.89□□□□□ -1.95
VRK1-205ENST00000555402 IDH3GP51553 393 aaPredicted RBP2.89□□□□□ -1.95
VRK1-205ENST00000555402 IL15RAQ13261 267 aa2.89□□□□□ -1.95
VRK1-205ENST00000555402 GUK1Q16774 197 aa2.89□□□□□ -1.95
VRK1-205ENST00000555402 C4orf26Q17RF5 130 aa2.89□□□□□ -1.95
VRK1-205ENST00000555402 LAMTOR1Q6IAA8 161 aa2.89□□□□□ -1.95
VRK1-205ENST00000555402 GLYATQ6IB77 296 aa2.89□□□□□ -1.95
VRK1-205ENST00000555402 FAM183BPQ6ZVS7 135 aa2.89□□□□□ -1.95
VRK1-205ENST00000555402 AMN1Q8IY45 258 aa2.89□□□□□ -1.95
VRK1-205ENST00000555402 C1orf64Q8NEQ6 169 aa2.89□□□□□ -1.95
VRK1-205ENST00000555402 OR1M1Q8NGA1 313 aa2.89□□□□□ -1.95
VRK1-205ENST00000555402 HAVCR2Q8TDQ0 301 aa2.89□□□□□ -1.95
VRK1-205ENST00000555402 ZNF721Q8TF20 911 aa2.89□□□□□ -1.95
VRK1-205ENST00000555402 RAB8BQ92930 207 aa2.89□□□□□ -1.95
VRK1-205ENST00000555402 PRAP1Q96NZ9 151 aa2.89□□□□□ -1.95
VRK1-205ENST00000555402 SLC2A9Q9NRM0 540 aa2.89□□□□□ -1.95
VRK1-205ENST00000555402 ZNF337Q9Y3M9 751 aa2.89□□□□□ -1.95
VRK1-205ENST00000555402 ALG5Q9Y673 324 aa2.89□□□□□ -1.95
VRK1-205ENST00000555402 GPR179Q6PRD1 2367 aa2.89□□□□□ -1.95
VRK1-205ENST00000555402 VWA8A3KMH1 1905 aa2.89□□□□□ -1.95
VRK1-205ENST00000555402 CAMSAP1Q5T5Y3 1602 aa2.89□□□□□ -1.95
VRK1-205ENST00000555402 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.88□□□□□ -1.95
VRK1-205ENST00000555402 MYBPHLA2RUH7 354 aa2.88□□□□□ -1.95
VRK1-205ENST00000555402 SOX14O95416 240 aa2.88□□□□□ -1.95
VRK1-205ENST00000555402 SERPINA1P01009 418 aa2.88□□□□□ -1.95
VRK1-205ENST00000555402 SPNP16150 400 aa2.88□□□□□ -1.95
VRK1-205ENST00000555402 ELK4P28324 431 aa2.88□□□□□ -1.95
VRK1-205ENST00000555402 S100A2P29034 98 aa2.88□□□□□ -1.95
VRK1-205ENST00000555402 OMPP47874 163 aa2.88□□□□□ -1.95
VRK1-205ENST00000555402 OR4D2P58180 307 aa2.88□□□□□ -1.95
VRK1-205ENST00000555402 RANP62826 216 aaKnown RBP2.88□□□□□ -1.95
VRK1-205ENST00000555402 TMEM176BQ3YBM2 270 aaPredicted RBP2.88□□□□□ -1.95
VRK1-205ENST00000555402 DGAT2L6Q6ZPD8 337 aa2.88□□□□□ -1.95
VRK1-205ENST00000555402 DPPA2Q7Z7J5 298 aa2.88□□□□□ -1.95
VRK1-205ENST00000555402 S100A7AQ86SG5 101 aa2.88□□□□□ -1.95
VRK1-205ENST00000555402 CPNE9Q8IYJ1 553 aa2.88□□□□□ -1.95
VRK1-205ENST00000555402 GATD1Q8NB37 220 aa2.88□□□□□ -1.95
VRK1-205ENST00000555402 STOML3Q8TAV4 291 aa2.88□□□□□ -1.95
VRK1-205ENST00000555402 OLFM3Q96PB7 478 aa2.88□□□□□ -1.95
VRK1-205ENST00000555402 SHANK2-AS3Q9BTD1 123 aa2.88□□□□□ -1.95
VRK1-205ENST00000555402 PLA2G12AQ9BZM1 189 aa2.88□□□□□ -1.95
VRK1-205ENST00000555402 MAP1LC3AQ9H492 121 aa2.88□□□□□ -1.95
VRK1-205ENST00000555402 MMACHCQ9Y4U1 282 aa2.88□□□□□ -1.95
VRK1-205ENST00000555402 V9GYQ6 96 aa2.88□□□□□ -1.95
VRK1-205ENST00000555402 MYO15BQ96JP2 1530 aa2.88□□□□□ -1.95
VRK1-205ENST00000555402 THADAQ6YHU6 1953 aa2.87□□□□□ -1.95
VRK1-205ENST00000555402 TRAV8-2A0A0B4J237 113 aa2.87□□□□□ -1.95
VRK1-205ENST00000555402 OR5K4A6NMS3 321 aa2.87□□□□□ -1.95
VRK1-205ENST00000555402 LEUTXA8MZ59 168 aa2.87□□□□□ -1.95
VRK1-205ENST00000555402 TMEM238C9JI98 176 aa2.87□□□□□ -1.95
VRK1-205ENST00000555402 H0YJX3 145 aa2.87□□□□□ -1.95
VRK1-205ENST00000555402 KCNK1O00180 336 aa2.87□□□□□ -1.95
VRK1-205ENST00000555402 ISLRO14498 428 aa2.87□□□□□ -1.95
VRK1-205ENST00000555402 STX10O60499 249 aa2.87□□□□□ -1.95
VRK1-205ENST00000555402 PDCD6O75340 191 aa2.87□□□□□ -1.95
VRK1-205ENST00000555402 DCTN3O75935 186 aa2.87□□□□□ -1.95
VRK1-205ENST00000555402 CIAO1O76071 339 aa2.87□□□□□ -1.95
VRK1-205ENST00000555402 KRT75O95678 551 aa2.87□□□□□ -1.95
VRK1-205ENST00000555402 TNNC2P02585 160 aa2.87□□□□□ -1.95
VRK1-205ENST00000555402 HIST1H1EP10412 219 aaKnown RBP2.87□□□□□ -1.95
VRK1-205ENST00000555402 PTHLHP12272 177 aa2.87□□□□□ -1.95
VRK1-205ENST00000555402 ATF1P18846 271 aa2.87□□□□□ -1.95
VRK1-205ENST00000555402 PSMA1P25786 263 aaKnown RBP2.87□□□□□ -1.95
VRK1-205ENST00000555402 PYCR1P32322 319 aa2.87□□□□□ -1.95
VRK1-205ENST00000555402 RCVRNP35243 200 aa2.87□□□□□ -1.95
VRK1-205ENST00000555402 SLCO1A2P46721 670 aa2.87□□□□□ -1.95
VRK1-205ENST00000555402 ARPC4P59998 168 aa2.87□□□□□ -1.95
VRK1-205ENST00000555402 DYNLL1P63167 89 aaKnown RBP2.87□□□□□ -1.95
VRK1-205ENST00000555402 SMAGPQ0VAQ4 97 aa2.87□□□□□ -1.95
VRK1-205ENST00000555402 ENDOGQ14249 297 aaKnown RBP2.87□□□□□ -1.95
VRK1-205ENST00000555402 OR52E4Q8NGH9 312 aa2.87□□□□□ -1.95
VRK1-205ENST00000555402 OR4C13Q8NGP0 309 aa2.87□□□□□ -1.95
VRK1-205ENST00000555402 SMIM12Q96EX1 92 aa2.87□□□□□ -1.95
VRK1-205ENST00000555402 EBNA1BP2Q99848 306 aaKnown RBP2.87□□□□□ -1.95
VRK1-205ENST00000555402 FAAP24Q9BTP7 215 aa2.87□□□□□ -1.95
VRK1-205ENST00000555402 SLC22A4Q9H015 551 aa2.87□□□□□ -1.95
VRK1-205ENST00000555402 MS4A6AQ9H2W1 248 aa2.87□□□□□ -1.95
VRK1-205ENST00000555402 ARL2BPQ9Y2Y0 163 aa2.87□□□□□ -1.95
VRK1-205ENST00000555402 TRAPPC1Q9Y5R8 145 aa2.87□□□□□ -1.95
VRK1-205ENST00000555402 ADGRL1O94910 1474 aa2.87□□□□□ -1.95
VRK1-205ENST00000555402 PBRM1Q86U86 1689 aa2.87□□□□□ -1.95
VRK1-205ENST00000555402 PCF11O94913 1555 aaKnown RBP2.87□□□□□ -1.95
VRK1-205ENST00000555402 NOS1P29475 1434 aa2.86□□□□□ -1.95
VRK1-205ENST00000555402 METTL15A6NJ78 407 aa2.86□□□□□ -1.95
VRK1-205ENST00000555402 FADS1O60427 444 aa2.86□□□□□ -1.95
VRK1-205ENST00000555402 IL6P05231 212 aa2.86□□□□□ -1.95
VRK1-205ENST00000555402 RNASE2P10153 161 aaKnown RBP2.86□□□□□ -1.95
VRK1-205ENST00000555402 GTF2F2P13984 249 aa2.86□□□□□ -1.95
VRK1-205ENST00000555402 RPL12P30050 165 aaKnown RBP2.86□□□□□ -1.95
VRK1-205ENST00000555402 TCL1AP56279 114 aa2.86□□□□□ -1.95
VRK1-205ENST00000555402 PPP1R1AQ13522 171 aa2.86□□□□□ -1.95
VRK1-205ENST00000555402 SPA17Q15506 151 aa2.86□□□□□ -1.95
VRK1-205ENST00000555402 TAF1AQ15573 450 aaPredicted RBP2.86□□□□□ -1.95
VRK1-205ENST00000555402 CLEC12BQ2HXU8 276 aa2.86□□□□□ -1.95
VRK1-205ENST00000555402 LRRC26Q2I0M4 334 aa2.86□□□□□ -1.95
VRK1-205ENST00000555402 LDLRAD2Q5SZI1 272 aa2.86□□□□□ -1.95
VRK1-205ENST00000555402 ZFAND6Q6FIF0 208 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms