RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 AK3Q9UIJ7 227 aa9.74□□□□□ -0.85
SRP54-206ENST00000555317 HSF4Q9ULV5 492 aa9.74□□□□□ -0.85
SRP54-206ENST00000555317 MGAT4AQ9UM21 535 aa9.74□□□□□ -0.85
SRP54-206ENST00000555317 A0A0A6YYD4 124 aa9.73□□□□□ -0.85
SRP54-206ENST00000555317 SHISA3A0PJX4 238 aa9.73□□□□□ -0.85
SRP54-206ENST00000555317 LY6LH3BQJ8 138 aa9.73□□□□□ -0.85
SRP54-206ENST00000555317 RAB6AP20340 208 aa9.73□□□□□ -0.85
SRP54-206ENST00000555317 LOXL3P58215 753 aa9.73□□□□□ -0.85
SRP54-206ENST00000555317 UTF1Q5T230 341 aa9.73□□□□□ -0.85
SRP54-206ENST00000555317 OR8H3Q8N146 312 aa9.73□□□□□ -0.85
SRP54-206ENST00000555317 FAM89BQ8N5H3 189 aa9.73□□□□□ -0.85
SRP54-206ENST00000555317 LINC00311Q8N616 119 aa9.73□□□□□ -0.85
SRP54-206ENST00000555317 C8orf31Q8N9H6 132 aa9.73□□□□□ -0.85
SRP54-206ENST00000555317 IL1F10Q8WWZ1 152 aa9.73□□□□□ -0.85
SRP54-206ENST00000555317 RAB3CQ96E17 227 aa9.73□□□□□ -0.85
SRP54-206ENST00000555317 ARHGAP5-AS1Q96IT6 56 aa9.73□□□□□ -0.85
SRP54-206ENST00000555317 CMSS1Q9BQ75 279 aaKnown RBP9.73□□□□□ -0.85
SRP54-206ENST00000555317 OCSTAMPQ9BR26 566 aa9.73□□□□□ -0.85
SRP54-206ENST00000555317 PRSS22Q9GZN4 317 aa9.73□□□□□ -0.85
SRP54-206ENST00000555317 DAPK2Q9UIK4 370 aa9.73□□□□□ -0.85
SRP54-206ENST00000555317 JPT1Q9UK76 154 aa9.73□□□□□ -0.85
SRP54-206ENST00000555317 PKD1L1Q8TDX9 2849 aa9.73□□□□□ -0.85
SRP54-206ENST00000555317 A0A075B6Q4 140 aa9.72□□□□□ -0.85
SRP54-206ENST00000555317 A0A0B4J203 849 aa9.72□□□□□ -0.85
SRP54-206ENST00000555317 TIMM23O14925 209 aa9.72□□□□□ -0.85
SRP54-206ENST00000555317 LDLRAD4O15165 306 aa9.72□□□□□ -0.85
SRP54-206ENST00000555317 NAPSAO96009 420 aa9.72□□□□□ -0.85
SRP54-206ENST00000555317 GAPDHP04406 335 aaKnown RBP9.72□□□□□ -0.85
SRP54-206ENST00000555317 CD3GP09693 182 aa9.72□□□□□ -0.85
SRP54-206ENST00000555317 CD24P25063 80 aa9.72□□□□□ -0.85
SRP54-206ENST00000555317 SDC2P34741 201 aa9.72□□□□□ -0.85
SRP54-206ENST00000555317 KIR2DS4P43632 304 aa9.72□□□□□ -0.85
SRP54-206ENST00000555317 HTD2P86397 168 aa9.72□□□□□ -0.85
SRP54-206ENST00000555317 MXD1Q05195 221 aa9.72□□□□□ -0.85
SRP54-206ENST00000555317 STEAP3Q658P3 488 aa9.72□□□□□ -0.85
SRP54-206ENST00000555317 SFXN4Q6P4A7 337 aa9.72□□□□□ -0.85
SRP54-206ENST00000555317 CCBE1Q6UXH8 406 aaPredicted RBP9.72□□□□□ -0.85
SRP54-206ENST00000555317 MOB3BQ86TA1 216 aa9.72□□□□□ -0.85
SRP54-206ENST00000555317 DRAM1Q8N682 238 aa9.72□□□□□ -0.85
SRP54-206ENST00000555317 OR2AK2Q8NG84 335 aa9.72□□□□□ -0.85
SRP54-206ENST00000555317 OR10R2Q8NGX6 335 aa9.72□□□□□ -0.85
SRP54-206ENST00000555317 OR56B4Q8NH76 319 aa9.72□□□□□ -0.85
SRP54-206ENST00000555317 PTX4Q96A99 478 aa9.72□□□□□ -0.85
SRP54-206ENST00000555317 SLC25A33Q9BSK2 321 aa9.72□□□□□ -0.85
SRP54-206ENST00000555317 ABHD14AQ9BUJ0 271 aa9.72□□□□□ -0.85
SRP54-206ENST00000555317 PECRQ9BY49 303 aa9.72□□□□□ -0.85
SRP54-206ENST00000555317 ATG5Q9H1Y0 275 aa9.72□□□□□ -0.85
SRP54-206ENST00000555317 ZNF696Q9H7X3 374 aa9.72□□□□□ -0.85
SRP54-206ENST00000555317 M0QZK8 103 aa9.71□□□□□ -0.86
SRP54-206ENST00000555317 HSPA12AO43301 675 aa9.71□□□□□ -0.86
SRP54-206ENST00000555317 TXNL1O43396 289 aa9.71□□□□□ -0.86
SRP54-206ENST00000555317 AIREO43918 545 aa9.71□□□□□ -0.86
SRP54-206ENST00000555317 SCGNO76038 276 aa9.71□□□□□ -0.86
SRP54-206ENST00000555317 OR2F2O95006 317 aa9.71□□□□□ -0.86
SRP54-206ENST00000555317 SNRNP70P08621 437 aaKnown RBP9.71□□□□□ -0.86
SRP54-206ENST00000555317 SLC2A2P11168 524 aaPredicted RBP9.71□□□□□ -0.86
SRP54-206ENST00000555317 TMEM11P17152 192 aa9.71□□□□□ -0.86
SRP54-206ENST00000555317 PPP1CCP36873 323 aaKnown RBP9.71□□□□□ -0.86
SRP54-206ENST00000555317 TALDO1P37837 337 aa9.71□□□□□ -0.86
SRP54-206ENST00000555317 REG1BP48304 166 aa9.71□□□□□ -0.86
SRP54-206ENST00000555317 ZNF816Q0VGE8 651 aaPredicted RBP9.71□□□□□ -0.86
SRP54-206ENST00000555317 ARL6IP1Q15041 203 aa9.71□□□□□ -0.86
SRP54-206ENST00000555317 HMGN3Q15651 99 aa9.71□□□□□ -0.86
SRP54-206ENST00000555317 SLC25A48Q6ZT89 311 aaKnown RBP9.71□□□□□ -0.86
SRP54-206ENST00000555317 TGIF2LXQ8IUE1 241 aa9.71□□□□□ -0.86
SRP54-206ENST00000555317 LYG1Q8N1E2 194 aa9.71□□□□□ -0.86
SRP54-206ENST00000555317 OR52L2PQ8NGH6 319 aa9.71□□□□□ -0.86
SRP54-206ENST00000555317 PHF21AQ96BD5 680 aa9.71□□□□□ -0.86
SRP54-206ENST00000555317 HDHD3Q9BSH5 251 aaPredicted RBP9.71□□□□□ -0.86
SRP54-206ENST00000555317 TRBV6-6A0A0A6YYG2 114 aa9.7□□□□□ -0.86
SRP54-206ENST00000555317 IGHV1-3A0A0C4DH29 117 aa9.7□□□□□ -0.86
SRP54-206ENST00000555317 A0A1W2PPI3 338 aa9.7□□□□□ -0.86
SRP54-206ENST00000555317 FOXI3A8MTJ6 420 aaPredicted RBP9.7□□□□□ -0.86
SRP54-206ENST00000555317 VSIG10L2P0DP72 767 aa9.7□□□□□ -0.86
SRP54-206ENST00000555317 VDAC2P45880 294 aaPredicted RBP9.7□□□□□ -0.86
SRP54-206ENST00000555317 EFNB2P52799 333 aa9.7□□□□□ -0.86
SRP54-206ENST00000555317 PROK1P58294 105 aa9.7□□□□□ -0.86
SRP54-206ENST00000555317 HLA-DRB3P79483 266 aa9.7□□□□□ -0.86
SRP54-206ENST00000555317 PLA2G7Q13093 441 aa9.7□□□□□ -0.86
SRP54-206ENST00000555317 ARFRP1Q13795 201 aa9.7□□□□□ -0.86
SRP54-206ENST00000555317 GNMTQ14749 295 aa9.7□□□□□ -0.86
SRP54-206ENST00000555317 MORN2Q502X0 79 aa9.7□□□□□ -0.86
SRP54-206ENST00000555317 PLAC9Q5JTB6 97 aa9.7□□□□□ -0.86
SRP54-206ENST00000555317 IDNKQ5T6J7 187 aa9.7□□□□□ -0.86
SRP54-206ENST00000555317 FAM53AQ6NSI3 398 aaPredicted RBP9.7□□□□□ -0.86
SRP54-206ENST00000555317 NR2C2APQ86WQ0 139 aa9.7□□□□□ -0.86
SRP54-206ENST00000555317 THNSL2Q86YJ6 484 aa9.7□□□□□ -0.86
SRP54-206ENST00000555317 KLHDC1Q8N7A1 406 aa9.7□□□□□ -0.86
SRP54-206ENST00000555317 LGALS14Q8TCE9 139 aa9.7□□□□□ -0.86
SRP54-206ENST00000555317 CYYR1Q96J86 154 aa9.7□□□□□ -0.86
SRP54-206ENST00000555317 RBM14Q96PK6 669 aaKnown RBP9.7□□□□□ -0.86
SRP54-206ENST00000555317 CENPOQ9BU64 300 aa9.7□□□□□ -0.86
SRP54-206ENST00000555317 SLC23A1Q9UHI7 598 aa9.7□□□□□ -0.86
SRP54-206ENST00000555317 SIGLEC9Q9Y336 463 aa9.7□□□□□ -0.86
SRP54-206ENST00000555317 MOB4Q9Y3A3 225 aa9.7□□□□□ -0.86
SRP54-206ENST00000555317 WNK1Q9H4A3 2382 aa9.7□□□□□ -0.86
SRP54-206ENST00000555317 SERPINE3A8MV23 424 aa9.69□□□□□ -0.86
SRP54-206ENST00000555317 M0QZ24 198 aa9.69□□□□□ -0.86
SRP54-206ENST00000555317 SLC31A2O15432 143 aa9.69□□□□□ -0.86
SRP54-206ENST00000555317 YPEL1O60688 119 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms