RNA–Protein interactions for RNA: ENST00000555046.1

TMEM260-206, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-206ENST00000555046 DYRK2Q92630 601 aa8.6□□□□□ -1.03
TMEM260-206ENST00000555046 GCDHQ92947 438 aaPredicted RBP8.6□□□□□ -1.03
TMEM260-206ENST00000555046 SSX3Q99909 188 aa8.6□□□□□ -1.03
TMEM260-206ENST00000555046 OCSTAMPQ9BR26 566 aa8.6□□□□□ -1.03
TMEM260-206ENST00000555046 MMP28Q9H239 520 aa8.6□□□□□ -1.03
TMEM260-206ENST00000555046 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.6□□□□□ -1.03
TMEM260-206ENST00000555046 RHBDL2Q9NX52 303 aa8.6□□□□□ -1.03
TMEM260-206ENST00000555046 GFOD1Q9NXC2 390 aa8.6□□□□□ -1.03
TMEM260-206ENST00000555046 ZNRD1Q9P1U0 126 aa8.6□□□□□ -1.03
TMEM260-206ENST00000555046 AK3Q9UIJ7 227 aa8.6□□□□□ -1.03
TMEM260-206ENST00000555046 PITPNC1Q9UKF7 332 aa8.6□□□□□ -1.03
TMEM260-206ENST00000555046 A0A0A6YYD4 124 aa8.59□□□□□ -1.03
TMEM260-206ENST00000555046 A0A0B4J203 849 aa8.59□□□□□ -1.03
TMEM260-206ENST00000555046 TRAV39A0A0B4J263 110 aa8.59□□□□□ -1.03
TMEM260-206ENST00000555046 SMIM30A4D0T7 59 aa8.59□□□□□ -1.03
TMEM260-206ENST00000555046 DNAJC9-AS1A6NH13 148 aa8.59□□□□□ -1.03
TMEM260-206ENST00000555046 TRDCB7Z8K6 153 aa8.59□□□□□ -1.03
TMEM260-206ENST00000555046 YPEL1O60688 119 aa8.59□□□□□ -1.03
TMEM260-206ENST00000555046 IGLV1-47P01700 117 aa8.59□□□□□ -1.03
TMEM260-206ENST00000555046 GSTP1P09211 210 aaKnown RBP8.59□□□□□ -1.03
TMEM260-206ENST00000555046 GNB3P16520 340 aa8.59□□□□□ -1.03
TMEM260-206ENST00000555046 ZBTB25P24278 435 aa8.59□□□□□ -1.03
TMEM260-206ENST00000555046 DYNLT3P51808 116 aa8.59□□□□□ -1.03
TMEM260-206ENST00000555046 EFNB2P52799 333 aa8.59□□□□□ -1.03
TMEM260-206ENST00000555046 DLX1P56177 255 aa8.59□□□□□ -1.03
TMEM260-206ENST00000555046 SRSF2Q01130 221 aaKnown RBP8.59□□□□□ -1.03
TMEM260-206ENST00000555046 PRB3Q04118 309 aaPredicted RBP8.59□□□□□ -1.03
TMEM260-206ENST00000555046 CTF1Q16619 201 aa8.59□□□□□ -1.03
TMEM260-206ENST00000555046 LTC4SQ16873 150 aa8.59□□□□□ -1.03
TMEM260-206ENST00000555046 PNLIPRP3Q17RR3 467 aa8.59□□□□□ -1.03
TMEM260-206ENST00000555046 HLA-DRB5Q30154 266 aa8.59□□□□□ -1.03
TMEM260-206ENST00000555046 PLAC9Q5JTB6 97 aa8.59□□□□□ -1.03
TMEM260-206ENST00000555046 HACD4Q5VWC8 232 aa8.59□□□□□ -1.03
TMEM260-206ENST00000555046 ZNF880Q6PDB4 577 aa8.59□□□□□ -1.03
TMEM260-206ENST00000555046 PRR18Q8N4B5 295 aa8.59□□□□□ -1.03
TMEM260-206ENST00000555046 LINC00311Q8N616 119 aa8.59□□□□□ -1.03
TMEM260-206ENST00000555046 RPEQ96AT9 228 aa8.59□□□□□ -1.03
TMEM260-206ENST00000555046 YPEL2Q96QA6 119 aa8.59□□□□□ -1.03
TMEM260-206ENST00000555046 ABCG5Q9H222 651 aa8.59□□□□□ -1.03
TMEM260-206ENST00000555046 DCSTAMPQ9H295 470 aa8.59□□□□□ -1.03
TMEM260-206ENST00000555046 KCNK15Q9H427 330 aa8.59□□□□□ -1.03
TMEM260-206ENST00000555046 Q9N2K0 584 aa8.59□□□□□ -1.03
TMEM260-206ENST00000555046 JPT1Q9UK76 154 aa8.59□□□□□ -1.03
TMEM260-206ENST00000555046 PSG11Q9UQ72 335 aa8.59□□□□□ -1.03
TMEM260-206ENST00000555046 A0A1B0GUS0 222 aa8.58□□□□□ -1.04
TMEM260-206ENST00000555046 HSPA12AO43301 675 aa8.58□□□□□ -1.04
TMEM260-206ENST00000555046 DIRAS3O95661 229 aa8.58□□□□□ -1.04
TMEM260-206ENST00000555046 GAPDHP04406 335 aaKnown RBP8.58□□□□□ -1.04
TMEM260-206ENST00000555046 CTXN2P0C2S0 81 aa8.58□□□□□ -1.04
TMEM260-206ENST00000555046 FAM106CPP0CH98 169 aa8.58□□□□□ -1.04
TMEM260-206ENST00000555046 ZNF182P17025 639 aaPredicted RBP8.58□□□□□ -1.04
TMEM260-206ENST00000555046 DTYMKP23919 212 aa8.58□□□□□ -1.04
TMEM260-206ENST00000555046 RAB7AP51149 207 aa8.58□□□□□ -1.04
TMEM260-206ENST00000555046 LOXL3P58215 753 aa8.58□□□□□ -1.04
TMEM260-206ENST00000555046 NCS1P62166 190 aa8.58□□□□□ -1.04
TMEM260-206ENST00000555046 ACTG1P63261 375 aa8.58□□□□□ -1.04
TMEM260-206ENST00000555046 FOXL1Q12952 345 aa8.58□□□□□ -1.04
TMEM260-206ENST00000555046 HMGN3Q15651 99 aa8.58□□□□□ -1.04
TMEM260-206ENST00000555046 MORN2Q502X0 79 aa8.58□□□□□ -1.04
TMEM260-206ENST00000555046 UBE2NLQ5JXB2 153 aa8.58□□□□□ -1.04
TMEM260-206ENST00000555046 LHFPL4Q7Z7J7 247 aa8.58□□□□□ -1.04
TMEM260-206ENST00000555046 CLVS1Q8IUQ0 354 aaPredicted RBP8.58□□□□□ -1.04
TMEM260-206ENST00000555046 OR4P4Q8NGL7 312 aa8.58□□□□□ -1.04
TMEM260-206ENST00000555046 LGALS14Q8TCE9 139 aa8.58□□□□□ -1.04
TMEM260-206ENST00000555046 CAPSLQ8WWF8 208 aa8.58□□□□□ -1.04
TMEM260-206ENST00000555046 AKR1E2Q96JD6 320 aa8.58□□□□□ -1.04
TMEM260-206ENST00000555046 ZNF286AQ9HBT8 521 aa8.58□□□□□ -1.04
TMEM260-206ENST00000555046 ESM1Q9NQ30 184 aa8.58□□□□□ -1.04
TMEM260-206ENST00000555046 VPREB3Q9UKI3 123 aa8.58□□□□□ -1.04
TMEM260-206ENST00000555046 HILPDAQ9Y5L2 63 aa8.58□□□□□ -1.04
TMEM260-206ENST00000555046 SOX21Q9Y651 276 aaPredicted RBP8.58□□□□□ -1.04
TMEM260-206ENST00000555046 VWFP04275 2813 aa8.58□□□□□ -1.04
TMEM260-206ENST00000555046 EPPK1P58107 5090 aaKnown RBP8.57□□□□□ -1.04
TMEM260-206ENST00000555046 A0A075B6Q4 140 aa8.57□□□□□ -1.04
TMEM260-206ENST00000555046 MDFIC2A0A1B0GVS7 189 aa8.57□□□□□ -1.04
TMEM260-206ENST00000555046 MFNGO00587 321 aa8.57□□□□□ -1.04
TMEM260-206ENST00000555046 TXNL1O43396 289 aa8.57□□□□□ -1.04
TMEM260-206ENST00000555046 XRCC3O43542 346 aa8.57□□□□□ -1.04
TMEM260-206ENST00000555046 IGHV4-59P01825 116 aa8.57□□□□□ -1.04
TMEM260-206ENST00000555046 GDNFP39905 211 aa8.57□□□□□ -1.04
TMEM260-206ENST00000555046 CBX5P45973 191 aa8.57□□□□□ -1.04
TMEM260-206ENST00000555046 GNG2P59768 71 aa8.57□□□□□ -1.04
TMEM260-206ENST00000555046 THNSL2Q86YJ6 484 aa8.57□□□□□ -1.04
TMEM260-206ENST00000555046 OR8H3Q8N146 312 aa8.57□□□□□ -1.04
TMEM260-206ENST00000555046 OR4A4PQ8NGN8 299 aa8.57□□□□□ -1.04
TMEM260-206ENST00000555046 OR1L1Q8NH94 360 aa8.57□□□□□ -1.04
TMEM260-206ENST00000555046 C15orf40Q8WUR7 153 aa8.57□□□□□ -1.04
TMEM260-206ENST00000555046 IL1F10Q8WWZ1 152 aa8.57□□□□□ -1.04
TMEM260-206ENST00000555046 EDARADDQ8WWZ3 215 aa8.57□□□□□ -1.04
TMEM260-206ENST00000555046 AJUBAQ96IF1 538 aa8.57□□□□□ -1.04
TMEM260-206ENST00000555046 DUX5Q96PT3 197 aa8.57□□□□□ -1.04
TMEM260-206ENST00000555046 KCNK7Q9Y2U2 307 aa8.57□□□□□ -1.04
TMEM260-206ENST00000555046 TRAV18A0A075B6X5 111 aa8.56□□□□□ -1.04
TMEM260-206ENST00000555046 TMEM89A2RUT3 159 aa8.56□□□□□ -1.04
TMEM260-206ENST00000555046 LY6LH3BQJ8 138 aa8.56□□□□□ -1.04
TMEM260-206ENST00000555046 H3BUX3 64 aa8.56□□□□□ -1.04
TMEM260-206ENST00000555046 ITGB1BP1O14713 200 aa8.56□□□□□ -1.04
TMEM260-206ENST00000555046 TPPPO94811 219 aa8.56□□□□□ -1.04
TMEM260-206ENST00000555046 APOA1P02647 267 aa8.56□□□□□ -1.04
TMEM260-206ENST00000555046 TGFBR1P36897 503 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms