RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 IAH1Q2TAA2 248 aaPredicted RBP9.36□□□□□ -0.91
SHMT2-216ENST00000554975 HIKESHIQ53FT3 197 aa9.36□□□□□ -0.91
SHMT2-216ENST00000554975 RTN4RL2Q86UN3 420 aa9.36□□□□□ -0.91
SHMT2-216ENST00000554975 BAP18Q8IXM2 172 aa9.36□□□□□ -0.91
SHMT2-216ENST00000554975 MUC15Q8N387 334 aa9.36□□□□□ -0.91
SHMT2-216ENST00000554975 CPEB3Q8NE35 698 aaKnown RBP9.36□□□□□ -0.91
SHMT2-216ENST00000554975 BVESQ8NE79 360 aa9.36□□□□□ -0.91
SHMT2-216ENST00000554975 C1orf162Q8NEQ5 155 aaPredicted RBP9.36□□□□□ -0.91
SHMT2-216ENST00000554975 FGFBP3Q8TAT2 258 aa9.36□□□□□ -0.91
SHMT2-216ENST00000554975 ARL11Q969Q4 196 aa9.36□□□□□ -0.91
SHMT2-216ENST00000554975 MICU1Q9BPX6 476 aa9.36□□□□□ -0.91
SHMT2-216ENST00000554975 FAAP24Q9BTP7 215 aa9.36□□□□□ -0.91
SHMT2-216ENST00000554975 RTL8AQ9BWD3 113 aa9.36□□□□□ -0.91
SHMT2-216ENST00000554975 CDH20Q9HBT6 801 aa9.36□□□□□ -0.91
SHMT2-216ENST00000554975 TUBG2Q9NRH3 451 aa9.36□□□□□ -0.91
SHMT2-216ENST00000554975 GPR160Q9UJ42 338 aa9.36□□□□□ -0.91
SHMT2-216ENST00000554975 POLDIP2Q9Y2S7 368 aa9.36□□□□□ -0.91
SHMT2-216ENST00000554975 SLC25A15Q9Y619 301 aa9.36□□□□□ -0.91
SHMT2-216ENST00000554975 VWFP04275 2813 aa9.35□□□□□ -0.91
SHMT2-216ENST00000554975 A0A096LPE4 126 aa9.35□□□□□ -0.91
SHMT2-216ENST00000554975 TRBV6-6A0A0A6YYG2 114 aa9.35□□□□□ -0.91
SHMT2-216ENST00000554975 IGKV1-12A0A0C4DH73 117 aa9.35□□□□□ -0.91
SHMT2-216ENST00000554975 A0A1W2PPZ6 126 aa9.35□□□□□ -0.91
SHMT2-216ENST00000554975 CD300LBA8K4G0 201 aa9.35□□□□□ -0.91
SHMT2-216ENST00000554975 J3QT63 122 aa9.35□□□□□ -0.91
SHMT2-216ENST00000554975 IGKV1D-12P01611 117 aa9.35□□□□□ -0.91
SHMT2-216ENST00000554975 HLA-HP01893 362 aa9.35□□□□□ -0.91
SHMT2-216ENST00000554975 TK1P04183 234 aa9.35□□□□□ -0.91
SHMT2-216ENST00000554975 PTAFRP25105 342 aa9.35□□□□□ -0.91
SHMT2-216ENST00000554975 COMPP49747 757 aaPredicted RBP9.35□□□□□ -0.91
SHMT2-216ENST00000554975 EFNA4P52798 201 aa9.35□□□□□ -0.91
SHMT2-216ENST00000554975 PIGPP57054 158 aa9.35□□□□□ -0.91
SHMT2-216ENST00000554975 S100A10P60903 97 aa9.35□□□□□ -0.91
SHMT2-216ENST00000554975 DEFA6Q01524 100 aa9.35□□□□□ -0.91
SHMT2-216ENST00000554975 IL24Q13007 206 aa9.35□□□□□ -0.91
SHMT2-216ENST00000554975 ANKRD55Q3KP44 614 aa9.35□□□□□ -0.91
SHMT2-216ENST00000554975 PIGYQ3MUY2 71 aa9.35□□□□□ -0.91
SHMT2-216ENST00000554975 FIP1L1Q6UN15 594 aaKnown RBP9.35□□□□□ -0.91
SHMT2-216ENST00000554975 C1orf174Q8IYL3 243 aa9.35□□□□□ -0.91
SHMT2-216ENST00000554975 C17orf78Q8N4C9 275 aa9.35□□□□□ -0.91
SHMT2-216ENST00000554975 RNF141Q8WVD5 230 aa9.35□□□□□ -0.91
SHMT2-216ENST00000554975 RTN4IP1Q8WWV3 396 aaPredicted RBP9.35□□□□□ -0.91
SHMT2-216ENST00000554975 MAFIPQ8WZ33 124 aa9.35□□□□□ -0.91
SHMT2-216ENST00000554975 TOMM40LQ969M1 308 aa9.35□□□□□ -0.91
SHMT2-216ENST00000554975 CXorf58Q96LI9 332 aa9.35□□□□□ -0.91
SHMT2-216ENST00000554975 ZC4H2Q9NQZ6 224 aa9.35□□□□□ -0.91
SHMT2-216ENST00000554975 SLC2A9Q9NRM0 540 aa9.35□□□□□ -0.91
SHMT2-216ENST00000554975 TMED3Q9Y3Q3 217 aa9.35□□□□□ -0.91
SHMT2-216ENST00000554975 NOTCH1P46531 2555 aa9.35□□□□□ -0.91
SHMT2-216ENST00000554975 E5RGE8 158 aa9.34□□□□□ -0.91
SHMT2-216ENST00000554975 DEGS1O15121 323 aa9.34□□□□□ -0.91
SHMT2-216ENST00000554975 ADAP1O75689 374 aa9.34□□□□□ -0.91
SHMT2-216ENST00000554975 CDS2O95674 445 aa9.34□□□□□ -0.91
SHMT2-216ENST00000554975 SFTPBP07988 381 aa9.34□□□□□ -0.91
SHMT2-216ENST00000554975 CCNOP22674 350 aa9.34□□□□□ -0.91
SHMT2-216ENST00000554975 GLRA1P23415 457 aa9.34□□□□□ -0.91
SHMT2-216ENST00000554975 CD40P25942 277 aa9.34□□□□□ -0.91
SHMT2-216ENST00000554975 DUSP1P28562 367 aa9.34□□□□□ -0.91
SHMT2-216ENST00000554975 IL2RGP31785 369 aa9.34□□□□□ -0.91
SHMT2-216ENST00000554975 HAAOP46952 286 aa9.34□□□□□ -0.91
SHMT2-216ENST00000554975 FBXW12Q6X9E4 464 aa9.34□□□□□ -0.91
SHMT2-216ENST00000554975 IL34Q6ZMJ4 242 aa9.34□□□□□ -0.91
SHMT2-216ENST00000554975 LIAT1Q6ZQX7 453 aa9.34□□□□□ -0.91
SHMT2-216ENST00000554975 FAM71E2Q8N5Q1 922 aa9.34□□□□□ -0.91
SHMT2-216ENST00000554975 C3orf56Q8N813 242 aa9.34□□□□□ -0.91
SHMT2-216ENST00000554975 ZNF565Q8N9K5 539 aa9.34□□□□□ -0.91
SHMT2-216ENST00000554975 WDR31Q8NA23 367 aa9.34□□□□□ -0.91
SHMT2-216ENST00000554975 NEK7Q8TDX7 302 aa9.34□□□□□ -0.91
SHMT2-216ENST00000554975 HPSE2Q8WWQ2 592 aa9.34□□□□□ -0.91
SHMT2-216ENST00000554975 BCL2L2Q92843 193 aaPredicted RBP9.34□□□□□ -0.91
SHMT2-216ENST00000554975 HDHD3Q9BSH5 251 aaPredicted RBP9.34□□□□□ -0.91
SHMT2-216ENST00000554975 RSRP1Q9BUV0 290 aa9.34□□□□□ -0.91
SHMT2-216ENST00000554975 IFT22Q9H7X7 185 aa9.34□□□□□ -0.91
SHMT2-216ENST00000554975 OBP2BQ9NPH6 170 aa9.34□□□□□ -0.91
SHMT2-216ENST00000554975 NSG2Q9Y328 171 aa9.34□□□□□ -0.91
SHMT2-216ENST00000554975 ATP23Q9Y6H3 246 aa9.34□□□□□ -0.91
SHMT2-216ENST00000554975 BORCS7-ASMTA0A0B4J1R7 106 aa9.33□□□□□ -0.92
SHMT2-216ENST00000554975 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.33□□□□□ -0.92
SHMT2-216ENST00000554975 TMEM210A6NLX4 147 aa9.33□□□□□ -0.92
SHMT2-216ENST00000554975 ZNF732B4DXR9 585 aa9.33□□□□□ -0.92
SHMT2-216ENST00000554975 K7EPK0 472 aa9.33□□□□□ -0.92
SHMT2-216ENST00000554975 FGF16O43320 207 aa9.33□□□□□ -0.92
SHMT2-216ENST00000554975 DEDDO75618 318 aa9.33□□□□□ -0.92
SHMT2-216ENST00000554975 JTBO76095 146 aa9.33□□□□□ -0.92
SHMT2-216ENST00000554975 NAPSAO96009 420 aa9.33□□□□□ -0.92
SHMT2-216ENST00000554975 PPYP01298 95 aa9.33□□□□□ -0.92
SHMT2-216ENST00000554975 HOXB5P09067 269 aa9.33□□□□□ -0.92
SHMT2-216ENST00000554975 PI3P19957 117 aa9.33□□□□□ -0.92
SHMT2-216ENST00000554975 PVALBP20472 110 aaPredicted RBP9.33□□□□□ -0.92
SHMT2-216ENST00000554975 FCGR2CP31995 323 aa9.33□□□□□ -0.92
SHMT2-216ENST00000554975 SRP14P37108 136 aaKnown RBP9.33□□□□□ -0.92
SHMT2-216ENST00000554975 FABP6P51161 128 aa9.33□□□□□ -0.92
SHMT2-216ENST00000554975 GPM6AP51674 278 aa9.33□□□□□ -0.92
SHMT2-216ENST00000554975 IL15RAQ13261 267 aa9.33□□□□□ -0.92
SHMT2-216ENST00000554975 RAB32Q13637 225 aa9.33□□□□□ -0.92
SHMT2-216ENST00000554975 GGNBP1Q5YKI7 109 aa9.33□□□□□ -0.92
SHMT2-216ENST00000554975 CALHM1Q8IU99 346 aa9.33□□□□□ -0.92
SHMT2-216ENST00000554975 OR5T2Q8NGG2 359 aa9.33□□□□□ -0.92
SHMT2-216ENST00000554975 OR5P3Q8WZ94 311 aa9.33□□□□□ -0.92
SHMT2-216ENST00000554975 IL22RA2Q969J5 263 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms