RNA–Protein interactions for RNA: ENST00000554805.6

SYNE2-213, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-213ENST00000554805 PMS2CLQ68D20 193 aa8.12□□□□□ -1.11
SYNE2-213ENST00000554805 FIP1L1Q6UN15 594 aaKnown RBP8.12□□□□□ -1.11
SYNE2-213ENST00000554805 SPNS3Q6ZMD2 512 aa8.12□□□□□ -1.11
SYNE2-213ENST00000554805 C20orf204Q6ZNR8 217 aa8.12□□□□□ -1.11
SYNE2-213ENST00000554805 OR10V1Q8NGI7 309 aa8.12□□□□□ -1.11
SYNE2-213ENST00000554805 ABHD14BQ96IU4 210 aa8.12□□□□□ -1.11
SYNE2-213ENST00000554805 FAM210BQ96KR6 192 aa8.12□□□□□ -1.11
SYNE2-213ENST00000554805 RAB40CQ96S21 281 aa8.12□□□□□ -1.11
SYNE2-213ENST00000554805 HES7Q9BYE0 225 aa8.12□□□□□ -1.11
SYNE2-213ENST00000554805 PLA2G3Q9NZ20 509 aa8.12□□□□□ -1.11
SYNE2-213ENST00000554805 TAAR3PQ9P1P4 343 aa8.12□□□□□ -1.11
SYNE2-213ENST00000554805 B4GALT7Q9UBV7 327 aa8.12□□□□□ -1.11
SYNE2-213ENST00000554805 MUC6Q6W4X9 2439 aa8.12□□□□□ -1.11
SYNE2-213ENST00000554805 PIEZO2Q9H5I5 2752 aa8.12□□□□□ -1.11
SYNE2-213ENST00000554805 ATMQ13315 3056 aa8.11□□□□□ -1.11
SYNE2-213ENST00000554805 ARGFXA6NJG6 315 aa8.11□□□□□ -1.11
SYNE2-213ENST00000554805 SYNGR2O43760 224 aa8.11□□□□□ -1.11
SYNE2-213ENST00000554805 CDX1P47902 265 aaPredicted RBP8.11□□□□□ -1.11
SYNE2-213ENST00000554805 RPS16P62249 146 aaKnown RBP8.11□□□□□ -1.11
SYNE2-213ENST00000554805 CLEC12BQ2HXU8 276 aa8.11□□□□□ -1.11
SYNE2-213ENST00000554805 C1orf87Q8N0U7 546 aa8.11□□□□□ -1.11
SYNE2-213ENST00000554805 ZNF383Q8NA42 475 aa8.11□□□□□ -1.11
SYNE2-213ENST00000554805 SPSB4Q96A44 273 aa8.11□□□□□ -1.11
SYNE2-213ENST00000554805 ADGRG7Q96K78 797 aa8.11□□□□□ -1.11
SYNE2-213ENST00000554805 IER2Q9BTL4 223 aa8.11□□□□□ -1.11
SYNE2-213ENST00000554805 GPR61Q9BZJ8 451 aa8.11□□□□□ -1.11
SYNE2-213ENST00000554805 ARRDC1-AS1Q9H2J1 176 aa8.11□□□□□ -1.11
SYNE2-213ENST00000554805 RIMS4Q9H426 269 aaPredicted RBP8.11□□□□□ -1.11
SYNE2-213ENST00000554805 C11orf1Q9H5F2 150 aa8.11□□□□□ -1.11
SYNE2-213ENST00000554805 RNF150Q9ULK6 438 aa8.11□□□□□ -1.11
SYNE2-213ENST00000554805 CEP192Q8TEP8 1941 aa8.11□□□□□ -1.11
SYNE2-213ENST00000554805 LY86O95711 162 aa8.11□□□□□ -1.11
SYNE2-213ENST00000554805 CLDN1O95832 211 aa8.11□□□□□ -1.11
SYNE2-213ENST00000554805 MMP9P14780 707 aa8.11□□□□□ -1.11
SYNE2-213ENST00000554805 GLIPR1P48060 266 aa8.11□□□□□ -1.11
SYNE2-213ENST00000554805 TRA2AQ13595 282 aaKnown RBP eCLIP8.11□□□□□ -1.11
SYNE2-213ENST00000554805 TESK1Q15569 626 aa8.11□□□□□ -1.11
SYNE2-213ENST00000554805 ADIRFQ15847 76 aa8.11□□□□□ -1.11
SYNE2-213ENST00000554805 C6orf15Q6UXA7 325 aaPredicted RBP8.11□□□□□ -1.11
SYNE2-213ENST00000554805 ZNF573Q86YE8 665 aa8.11□□□□□ -1.11
SYNE2-213ENST00000554805 NECAP1Q8NC96 275 aa8.11□□□□□ -1.11
SYNE2-213ENST00000554805 OR5T1Q8NG75 326 aa8.11□□□□□ -1.11
SYNE2-213ENST00000554805 OR5A2Q8NGI9 324 aa8.11□□□□□ -1.11
SYNE2-213ENST00000554805 PLPPR1Q8TBJ4 325 aa8.11□□□□□ -1.11
SYNE2-213ENST00000554805 MRPL30Q8TCC3 161 aaKnown RBP8.11□□□□□ -1.11
SYNE2-213ENST00000554805 CT55Q8WUE5 264 aa8.11□□□□□ -1.11
SYNE2-213ENST00000554805 VSIRQ9H7M9 311 aa8.11□□□□□ -1.11
SYNE2-213ENST00000554805 SLC39A9Q9NUM3 307 aa8.11□□□□□ -1.11
SYNE2-213ENST00000554805 A0A1B0GU03 582 aa8.1□□□□□ -1.11
SYNE2-213ENST00000554805 LOC102723971A0A1B0GUV8 181 aa8.1□□□□□ -1.11
SYNE2-213ENST00000554805 PAX9P55771 341 aa8.1□□□□□ -1.11
SYNE2-213ENST00000554805 GNG3P63215 75 aa8.1□□□□□ -1.11
SYNE2-213ENST00000554805 HBG1P69891 147 aa8.1□□□□□ -1.11
SYNE2-213ENST00000554805 HBG2P69892 147 aa8.1□□□□□ -1.11
SYNE2-213ENST00000554805 GFI1BQ5VTD9 330 aa8.1□□□□□ -1.11
SYNE2-213ENST00000554805 ZNF880Q6PDB4 577 aa8.1□□□□□ -1.11
SYNE2-213ENST00000554805 BEND4Q6ZU67 534 aa8.1□□□□□ -1.11
SYNE2-213ENST00000554805 OR8G5Q8NG78 346 aa8.1□□□□□ -1.11
SYNE2-213ENST00000554805 LHX4Q969G2 390 aa8.1□□□□□ -1.11
SYNE2-213ENST00000554805 DCAF16Q9NXF7 216 aa8.1□□□□□ -1.11
SYNE2-213ENST00000554805 DLL3Q9NYJ7 618 aa8.1□□□□□ -1.11
SYNE2-213ENST00000554805 KIAA2026Q5HYC2 2103 aa8.1□□□□□ -1.11
SYNE2-213ENST00000554805 UBE2L5PA0A1B0GUS4 154 aa8.1□□□□□ -1.11
SYNE2-213ENST00000554805 LILRA1O75019 489 aa8.1□□□□□ -1.11
SYNE2-213ENST00000554805 RHBDL1O75783 438 aa8.1□□□□□ -1.11
SYNE2-213ENST00000554805 IFNA1P01562 189 aa8.1□□□□□ -1.11
SYNE2-213ENST00000554805 SERPINA7P05543 415 aa8.1□□□□□ -1.11
SYNE2-213ENST00000554805 FABP4P15090 132 aa8.1□□□□□ -1.11
SYNE2-213ENST00000554805 DAZAP2Q15038 168 aaPredicted RBP8.1□□□□□ -1.11
SYNE2-213ENST00000554805 KRTAP27-1Q3LI81 207 aa8.1□□□□□ -1.11
SYNE2-213ENST00000554805 Q6ZRM9 215 aa8.1□□□□□ -1.11
SYNE2-213ENST00000554805 SLC35E3Q7Z769 313 aa8.1□□□□□ -1.11
SYNE2-213ENST00000554805 C1QL4Q86Z23 238 aa8.1□□□□□ -1.11
SYNE2-213ENST00000554805 C1orf210Q8IVY1 113 aa8.1□□□□□ -1.11
SYNE2-213ENST00000554805 ODF3L1Q8IXM7 274 aa8.1□□□□□ -1.11
SYNE2-213ENST00000554805 CABLES2Q9BTV7 478 aa8.1□□□□□ -1.11
SYNE2-213ENST00000554805 SIRT7Q9NRC8 400 aa8.1□□□□□ -1.11
SYNE2-213ENST00000554805 LOXL2Q9Y4K0 774 aa8.1□□□□□ -1.11
SYNE2-213ENST00000554805 TMEM265A0A087WTH1 108 aa8.1□□□□□ -1.11
SYNE2-213ENST00000554805 CLDN34H7C241 214 aa8.1□□□□□ -1.11
SYNE2-213ENST00000554805 BCL2P10415 239 aa8.1□□□□□ -1.11
SYNE2-213ENST00000554805 DEFA6Q01524 100 aa8.1□□□□□ -1.11
SYNE2-213ENST00000554805 PYY3Q5JQD4 70 aa8.1□□□□□ -1.11
SYNE2-213ENST00000554805 SAXO1Q8IYX7 474 aa8.1□□□□□ -1.11
SYNE2-213ENST00000554805 RPUSD4Q96CM3 377 aaKnown RBP8.1□□□□□ -1.11
SYNE2-213ENST00000554805 MGAQ8IWI9 3026 aa8.1□□□□□ -1.11
SYNE2-213ENST00000554805 TRAV24A0A0B4J272 114 aa8.09□□□□□ -1.11
SYNE2-213ENST00000554805 A0A1W2PR80 420 aa8.09□□□□□ -1.11
SYNE2-213ENST00000554805 MAP1LC3B2A6NCE7 125 aa8.09□□□□□ -1.11
SYNE2-213ENST00000554805 SEC14L6B5MCN3 397 aa8.09□□□□□ -1.11
SYNE2-213ENST00000554805 HIST1H2BKO60814 126 aa8.09□□□□□ -1.11
SYNE2-213ENST00000554805 HIST1H2BJP06899 126 aa8.09□□□□□ -1.11
SYNE2-213ENST00000554805 HIST1H2BOP23527 126 aa8.09□□□□□ -1.11
SYNE2-213ENST00000554805 LMO1P25800 156 aa8.09□□□□□ -1.11
SYNE2-213ENST00000554805 HIST1H2BBP33778 126 aa8.09□□□□□ -1.11
SYNE2-213ENST00000554805 MAGEA5P43359 124 aa8.09□□□□□ -1.11
SYNE2-213ENST00000554805 HIST1H2BDP58876 126 aa8.09□□□□□ -1.11
SYNE2-213ENST00000554805 HIST1H2BCP62807 126 aa8.09□□□□□ -1.11
SYNE2-213ENST00000554805 CLN3Q13286 438 aa8.09□□□□□ -1.11
SYNE2-213ENST00000554805 OR8G1Q15617 311 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms