RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 CPNE4Q96A23 557 aaPredicted RBP0.93□□□□□ -2.26
PRPF39-208ENST00000554785 CREB3L1Q96BA8 519 aa0.93□□□□□ -2.26
PRPF39-208ENST00000554785 ARL5BQ96KC2 179 aa0.93□□□□□ -2.26
PRPF39-208ENST00000554785 B9D2Q9BPU9 175 aa0.93□□□□□ -2.26
PRPF39-208ENST00000554785 FRMD8P1Q9BZ68 369 aaPredicted RBP0.93□□□□□ -2.26
PRPF39-208ENST00000554785 PATZ1Q9HBE1 687 aaKnown RBP0.93□□□□□ -2.26
PRPF39-208ENST00000554785 PARVBQ9HBI1 364 aa0.93□□□□□ -2.26
PRPF39-208ENST00000554785 C20orf96Q9NUD7 363 aaPredicted RBP0.93□□□□□ -2.26
PRPF39-208ENST00000554785 MAT2BQ9NZL9 334 aa0.93□□□□□ -2.26
PRPF39-208ENST00000554785 PSG11Q9UQ72 335 aa0.93□□□□□ -2.26
PRPF39-208ENST00000554785 ATP6V1DQ9Y5K8 247 aa0.93□□□□□ -2.26
PRPF39-208ENST00000554785 FSIP2Q5CZC0 6907 aa0.93□□□□□ -2.26
PRPF39-208ENST00000554785 DNAH9Q9NYC9 4486 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 IGHV3-74A0A0B4J1X5 117 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 GNG14A0A1W2PPG7 69 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 C5orf63A6NC05 138 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 OR6C70A6NIJ9 312 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 SUPT3HB4E1H0 165 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 CLDN25C9JDP6 229 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 H3BUX3 64 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 PFDN6O15212 129 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 AIREO43918 545 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 SCN2BO60939 215 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 GABARAPO95166 117 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 GPR75O95800 540 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 HLA-HP01893 362 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 KRT14P02533 472 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 OPN1SWP03999 348 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 TLX1NBP0CAT3 122 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 UBTFL6P0CB48 400 aaPredicted RBP0.92□□□□□ -2.26
PRPF39-208ENST00000554785 C1GALT1C1LP0DN25 315 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 ZNF823P16415 610 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 OTX1P32242 354 aaPredicted RBP0.92□□□□□ -2.26
PRPF39-208ENST00000554785 MAS1LP35410 378 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 CEACAM6P40199 344 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 SLC1A1P43005 524 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 CSNK1A1P48729 337 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 CX3CR1P49238 355 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 RGS8P57771 180 aaPredicted RBP0.92□□□□□ -2.26
PRPF39-208ENST00000554785 FGF12P61328 243 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 MYL5Q02045 173 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 ZNF117Q03924 483 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 MXD1Q05195 221 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 TGM3Q08188 693 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 GABRA6Q16445 453 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 DEFB136Q30KP8 78 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 TRMT5Q32P41 509 aaKnown RBP0.92□□□□□ -2.26
PRPF39-208ENST00000554785 PLPPR5Q32ZL2 321 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 SOHLH1Q5JUK2 328 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 THEM4Q5T1C6 240 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 KPRPQ5T749 579 aaPredicted RBP0.92□□□□□ -2.26
PRPF39-208ENST00000554785 TTC19Q6DKK2 380 aaPredicted RBP0.92□□□□□ -2.26
PRPF39-208ENST00000554785 C22orf42Q6IC83 251 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 REEP3Q6NUK4 255 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 NIPAL1Q6NVV3 410 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 NOXRED1Q6NXP6 359 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 SLC16A14Q7RTX9 510 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 LINC00523Q86TU6 105 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 SBSPONQ8IVN8 264 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 CYB561D1Q8N8Q1 229 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 WDR31Q8NA23 367 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 OR10AD1Q8NGE0 317 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 OR4A4PQ8NGN8 299 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 OR10J6PQ8NGY7 276 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 OR5B3Q8NH48 314 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 NEURL3Q96EH8 262 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 WDR34Q96EX3 536 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 DUS3LQ96G46 650 aaKnown RBP0.92□□□□□ -2.26
PRPF39-208ENST00000554785 NAP1L5Q96NT1 182 aaPredicted RBP0.92□□□□□ -2.26
PRPF39-208ENST00000554785 CHP1Q99653 195 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 C20orf24Q9BUV8 137 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 CHAC1Q9BUX1 264 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 SLC25A2Q9BXI2 301 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 MS4A8Q9BY19 250 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 PARP12Q9H0J9 701 aaKnown RBP0.92□□□□□ -2.26
PRPF39-208ENST00000554785 PCBD2Q9H0N5 130 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 NEK6Q9HC98 313 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 RETNQ9HD89 108 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 MYOZ1Q9NP98 299 aaPredicted RBP0.92□□□□□ -2.26
PRPF39-208ENST00000554785 ISYNA1Q9NPH2 558 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 TREX1Q9NSU2 369 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 DDX18Q9NVP1 670 aaKnown RBP0.92□□□□□ -2.26
PRPF39-208ENST00000554785 TAS2R13Q9NYV9 303 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 CHMP5Q9NZZ3 219 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 TAAR3PQ9P1P4 343 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 OR5V1Q9UGF6 321 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 LGALS13Q9UHV8 139 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 PSG8Q9UQ74 426 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 ST3GAL6Q9Y274 331 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 TMED5Q9Y3A6 229 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 MYCBP2O75592 4640 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 A0A0A6YYD5 115 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 IGHV2OR16-5A0A0B4J2B6 119 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 A0A1B0GVX0 72 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 CLDN24A6NM45 220 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 CEACAM18A8MTB9 384 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 HACD1B0YJ81 288 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 M0R3G1 203 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 SIRPB1O00241 398 aa0.92□□□□□ -2.26
PRPF39-208ENST00000554785 ENTPD5O75356 428 aa0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms