RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 ISG15P05161 165 aa12.16□□□□□ -0.46
VTI1B-204ENST00000554659 PLPPR5Q32ZL2 321 aa12.16□□□□□ -0.46
VTI1B-204ENST00000554659 OR4A47Q6IF82 309 aa12.16□□□□□ -0.46
VTI1B-204ENST00000554659 TRBV5-7A0A0A0MS05 114 aa12.16□□□□□ -0.46
VTI1B-204ENST00000554659 J3KRW8 73 aa12.16□□□□□ -0.46
VTI1B-204ENST00000554659 FAM27BQ5VT28 67 aa12.16□□□□□ -0.46
VTI1B-204ENST00000554659 OR4C46A6NHA9 309 aa12.16□□□□□ -0.46
VTI1B-204ENST00000554659 M0R3E3 92 aa12.16□□□□□ -0.46
VTI1B-204ENST00000554659 OR4A8P0C604 315 aa12.16□□□□□ -0.46
VTI1B-204ENST00000554659 LAIR2Q6ISS4 152 aa12.16□□□□□ -0.46
VTI1B-204ENST00000554659 BHLHA15Q7RTS1 189 aaPredicted RBP12.16□□□□□ -0.46
VTI1B-204ENST00000554659 PRSS53Q2L4Q9 553 aa12.16□□□□□ -0.46
VTI1B-204ENST00000554659 PUSL1Q8N0Z8 303 aaKnown RBP12.16□□□□□ -0.46
VTI1B-204ENST00000554659 TINAGQ9UJW2 476 aa12.16□□□□□ -0.46
VTI1B-204ENST00000554659 PILRAQ9UKJ1 303 aa12.16□□□□□ -0.46
VTI1B-204ENST00000554659 ISLRO14498 428 aa12.15□□□□□ -0.46
VTI1B-204ENST00000554659 UPK3AO75631 287 aa12.15□□□□□ -0.46
VTI1B-204ENST00000554659 HES3Q5TGS1 186 aa12.15□□□□□ -0.46
VTI1B-204ENST00000554659 TEPPQ6URK8 271 aa12.15□□□□□ -0.46
VTI1B-204ENST00000554659 STXBP6Q8NFX7 210 aa12.15□□□□□ -0.46
VTI1B-204ENST00000554659 MARVELD3Q96A59 401 aa12.15□□□□□ -0.46
VTI1B-204ENST00000554659 ZNF256Q9Y2P7 627 aaPredicted RBP12.15□□□□□ -0.46
VTI1B-204ENST00000554659 GCSHP23434 173 aa12.15□□□□□ -0.46
VTI1B-204ENST00000554659 ACP1P24666 158 aa12.15□□□□□ -0.46
VTI1B-204ENST00000554659 MAGEA5P43359 124 aa12.15□□□□□ -0.46
VTI1B-204ENST00000554659 MUC15Q8N387 334 aa12.15□□□□□ -0.46
VTI1B-204ENST00000554659 NFAM1Q8NET5 270 aaPredicted RBP12.15□□□□□ -0.46
VTI1B-204ENST00000554659 CRISPLD2Q9H0B8 497 aa12.15□□□□□ -0.46
VTI1B-204ENST00000554659 NMUP48645 174 aa12.15□□□□□ -0.46
VTI1B-204ENST00000554659 ABHD14BQ96IU4 210 aa12.15□□□□□ -0.46
VTI1B-204ENST00000554659 PPIHO43447 177 aaKnown RBP12.15□□□□□ -0.46
VTI1B-204ENST00000554659 KLF7O75840 302 aaPredicted RBP12.15□□□□□ -0.46
VTI1B-204ENST00000554659 CEBPDP49716 269 aaPredicted RBP12.15□□□□□ -0.46
VTI1B-204ENST00000554659 MYOZ3Q8TDC0 251 aa12.15□□□□□ -0.46
VTI1B-204ENST00000554659 AQP3Q92482 292 aa12.15□□□□□ -0.46
VTI1B-204ENST00000554659 NPDC1Q9NQX5 325 aaPredicted RBP12.15□□□□□ -0.46
VTI1B-204ENST00000554659 CYB5R3P00387 301 aaPredicted RBP12.15□□□□□ -0.47
VTI1B-204ENST00000554659 UNQ9370/PRO34162Q6UXP9 181 aa12.15□□□□□ -0.47
VTI1B-204ENST00000554659 ZNF738Q8NE65 137 aa12.15□□□□□ -0.47
VTI1B-204ENST00000554659 ZNF385AQ96PM9 386 aaKnown RBP12.15□□□□□ -0.47
VTI1B-204ENST00000554659 COL4A1P02462 1669 aa12.14□□□□□ -0.47
VTI1B-204ENST00000554659 A0A1W2PQF6 199 aa12.14□□□□□ -0.47
VTI1B-204ENST00000554659 C16orf82Q7Z2V1 217 aa12.14□□□□□ -0.47
VTI1B-204ENST00000554659 WDFY1Q8IWB7 410 aa12.14□□□□□ -0.47
VTI1B-204ENST00000554659 CYB561D1Q8N8Q1 229 aa12.14□□□□□ -0.47
VTI1B-204ENST00000554659 PERPQ96FX8 193 aa12.14□□□□□ -0.47
VTI1B-204ENST00000554659 IGHV5-10-1A0A0J9YXX1 117 aa12.14□□□□□ -0.47
VTI1B-204ENST00000554659 C21orf140B9A014 251 aa12.14□□□□□ -0.47
VTI1B-204ENST00000554659 H0Y980 276 aa12.14□□□□□ -0.47
VTI1B-204ENST00000554659 GNG7O60262 68 aa12.14□□□□□ -0.47
VTI1B-204ENST00000554659 TEX30Q5JUR7 227 aa12.14□□□□□ -0.47
VTI1B-204ENST00000554659 SSX8Q7RTT4 187 aa12.14□□□□□ -0.47
VTI1B-204ENST00000554659 WFDC6Q9BQY6 131 aa12.14□□□□□ -0.47
VTI1B-204ENST00000554659 TMEM204Q9BSN7 226 aa12.14□□□□□ -0.47
VTI1B-204ENST00000554659 PIPOXQ9P0Z9 390 aa12.14□□□□□ -0.47
VTI1B-204ENST00000554659 TMSB15BA0A087X1C1 80 aa12.14□□□□□ -0.47
VTI1B-204ENST00000554659 SYNGR1O43759 233 aa12.14□□□□□ -0.47
VTI1B-204ENST00000554659 MGPP08493 103 aa12.14□□□□□ -0.47
VTI1B-204ENST00000554659 HTN1P15515 57 aa12.14□□□□□ -0.47
VTI1B-204ENST00000554659 C10orf113Q5VZT2 155 aa12.14□□□□□ -0.47
VTI1B-204ENST00000554659 LDLRAD3Q86YD5 345 aa12.14□□□□□ -0.47
VTI1B-204ENST00000554659 AQP10Q96PS8 301 aa12.14□□□□□ -0.47
VTI1B-204ENST00000554659 GPR61Q9BZJ8 451 aa12.14□□□□□ -0.47
VTI1B-204ENST00000554659 RNF7Q9UBF6 113 aa12.14□□□□□ -0.47
VTI1B-204ENST00000554659 A0A1W2PRD5 423 aa12.14□□□□□ -0.47
VTI1B-204ENST00000554659 A0A1W2PRF3 423 aa12.14□□□□□ -0.47
VTI1B-204ENST00000554659 A0A1W2PRM7 423 aa12.14□□□□□ -0.47
VTI1B-204ENST00000554659 KLK10O43240 276 aa12.14□□□□□ -0.47
VTI1B-204ENST00000554659 KCNAB3O43448 404 aa12.14□□□□□ -0.47
VTI1B-204ENST00000554659 HSPB1P04792 205 aaKnown RBP12.14□□□□□ -0.47
VTI1B-204ENST00000554659 HIST1H1EP10412 219 aaKnown RBP12.14□□□□□ -0.47
VTI1B-204ENST00000554659 INO80CQ6PI98 192 aaPredicted RBP12.14□□□□□ -0.47
VTI1B-204ENST00000554659 TMEM252Q8N6L7 170 aa12.14□□□□□ -0.47
VTI1B-204ENST00000554659 OR1K1Q8NGR3 316 aa12.14□□□□□ -0.47
VTI1B-204ENST00000554659 OR4X1Q8NH49 305 aa12.14□□□□□ -0.47
VTI1B-204ENST00000554659 SGMS2Q8NHU3 365 aa12.14□□□□□ -0.47
VTI1B-204ENST00000554659 AKIRIN1Q9H9L7 192 aaPredicted RBP12.14□□□□□ -0.47
VTI1B-204ENST00000554659 IGLV1-36A0A0B4J1U3 117 aa12.13□□□□□ -0.47
VTI1B-204ENST00000554659 TSPAN2O60636 221 aa12.13□□□□□ -0.47
VTI1B-204ENST00000554659 CA2P00918 260 aa12.13□□□□□ -0.47
VTI1B-204ENST00000554659 ZNF841Q6ZN19 808 aa12.13□□□□□ -0.47
VTI1B-204ENST00000554659 TUBD1Q9UJT1 453 aa12.13□□□□□ -0.47
VTI1B-204ENST00000554659 QSER1Q2KHR3 1735 aa12.13□□□□□ -0.47
VTI1B-204ENST00000554659 SOX8P57073 446 aa12.13□□□□□ -0.47
VTI1B-204ENST00000554659 TMEM222Q9H0R3 208 aa12.13□□□□□ -0.47
VTI1B-204ENST00000554659 GAGE10A6NGK3 116 aa12.13□□□□□ -0.47
VTI1B-204ENST00000554659 TMPRSS2O15393 492 aa12.13□□□□□ -0.47
VTI1B-204ENST00000554659 CFDP00746 253 aaPredicted RBP12.13□□□□□ -0.47
VTI1B-204ENST00000554659 CCL4P13236 92 aa12.13□□□□□ -0.47
VTI1B-204ENST00000554659 SRP14P37108 136 aaKnown RBP12.13□□□□□ -0.47
VTI1B-204ENST00000554659 FAM209BQ5JX69 171 aa12.13□□□□□ -0.47
VTI1B-204ENST00000554659 MOGAT3Q86VF5 341 aa12.13□□□□□ -0.47
VTI1B-204ENST00000554659 AMELYQ99218 206 aa12.13□□□□□ -0.47
VTI1B-204ENST00000554659 ZNF665Q9H7R5 613 aa12.13□□□□□ -0.47
VTI1B-204ENST00000554659 SIAH2O43255 324 aa12.13□□□□□ -0.47
VTI1B-204ENST00000554659 BRS3P32247 399 aa12.13□□□□□ -0.47
VTI1B-204ENST00000554659 SFTPA2Q8IWL1 248 aa12.13□□□□□ -0.47
VTI1B-204ENST00000554659 OR8I2Q8N0Y5 310 aa12.13□□□□□ -0.47
VTI1B-204ENST00000554659 SLC25A40Q8TBP6 338 aa12.13□□□□□ -0.47
VTI1B-204ENST00000554659 KCNK17Q96T54 332 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms