RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 OBP2BQ9NPH6 170 aa9.92□□□□□ -0.82
SHMT2-212ENST00000554467 PPP1R14DQ9NXH3 145 aa9.92□□□□□ -0.82
SHMT2-212ENST00000554467 C14orf166Q9Y224 244 aaKnown RBP9.92□□□□□ -0.82
SHMT2-212ENST00000554467 POLEQ07864 2286 aa9.92□□□□□ -0.82
SHMT2-212ENST00000554467 COX5AP20674 150 aa9.92□□□□□ -0.82
SHMT2-212ENST00000554467 PRR30Q53SZ7 412 aaPredicted RBP9.92□□□□□ -0.82
SHMT2-212ENST00000554467 C20orf204Q6ZNR8 217 aa9.92□□□□□ -0.82
SHMT2-212ENST00000554467 PEG10Q86TG7 708 aaKnown RBP9.92□□□□□ -0.82
SHMT2-212ENST00000554467 SPACA1Q9HBV2 294 aa9.92□□□□□ -0.82
SHMT2-212ENST00000554467 PLSCR4Q9NRQ2 329 aa9.92□□□□□ -0.82
SHMT2-212ENST00000554467 NECAP2Q9NVZ3 263 aa9.92□□□□□ -0.82
SHMT2-212ENST00000554467 KPTNQ9Y664 436 aa9.92□□□□□ -0.82
SHMT2-212ENST00000554467 DIDO1Q9BTC0 2240 aaKnown RBP9.92□□□□□ -0.82
SHMT2-212ENST00000554467 MKRN2OSH3BPM6 223 aa9.92□□□□□ -0.82
SHMT2-212ENST00000554467 SCTP09683 121 aa9.92□□□□□ -0.82
SHMT2-212ENST00000554467 TAS2R31P59538 309 aa9.92□□□□□ -0.82
SHMT2-212ENST00000554467 PKIAP61925 76 aa9.92□□□□□ -0.82
SHMT2-212ENST00000554467 RPS23P62266 143 aaKnown RBP9.92□□□□□ -0.82
SHMT2-212ENST00000554467 KHDC3LQ587J8 217 aa9.92□□□□□ -0.82
SHMT2-212ENST00000554467 INO80CQ6PI98 192 aaPredicted RBP9.92□□□□□ -0.82
SHMT2-212ENST00000554467 SCCPDHQ8NBX0 429 aa9.92□□□□□ -0.82
SHMT2-212ENST00000554467 POM121Q96HA1 1249 aa9.92□□□□□ -0.82
SHMT2-212ENST00000554467 OR51I2Q9H344 312 aa9.92□□□□□ -0.82
SHMT2-212ENST00000554467 MPC1Q9Y5U8 109 aa9.92□□□□□ -0.82
SHMT2-212ENST00000554467 SIRPB1O00241 398 aa9.91□□□□□ -0.82
SHMT2-212ENST00000554467 SFT2D2O95562 160 aa9.91□□□□□ -0.82
SHMT2-212ENST00000554467 CGAP01215 116 aa9.91□□□□□ -0.82
SHMT2-212ENST00000554467 BMP5P22003 454 aa9.91□□□□□ -0.82
SHMT2-212ENST00000554467 OR8G1Q15617 311 aa9.91□□□□□ -0.82
SHMT2-212ENST00000554467 ANKRD39Q53RE8 183 aa9.91□□□□□ -0.82
SHMT2-212ENST00000554467 VHLLQ6RSH7 139 aa9.91□□□□□ -0.82
SHMT2-212ENST00000554467 ZNF474Q6S9Z5 364 aaPredicted RBP9.91□□□□□ -0.82
SHMT2-212ENST00000554467 BHLHA15Q7RTS1 189 aaPredicted RBP9.91□□□□□ -0.82
SHMT2-212ENST00000554467 DPPA2Q7Z7J5 298 aa9.91□□□□□ -0.82
SHMT2-212ENST00000554467 ZNF573Q86YE8 665 aa9.91□□□□□ -0.82
SHMT2-212ENST00000554467 ZNF286AQ9HBT8 521 aa9.91□□□□□ -0.82
SHMT2-212ENST00000554467 DIRAS3O95661 229 aa9.91□□□□□ -0.82
SHMT2-212ENST00000554467 RPS2P15880 293 aaKnown RBP9.91□□□□□ -0.82
SHMT2-212ENST00000554467 S100A2P29034 98 aa9.91□□□□□ -0.82
SHMT2-212ENST00000554467 SULT1A2P50226 295 aa9.91□□□□□ -0.82
SHMT2-212ENST00000554467 ZNF154Q13106 437 aa9.91□□□□□ -0.82
SHMT2-212ENST00000554467 FBXW12Q6X9E4 464 aa9.91□□□□□ -0.82
SHMT2-212ENST00000554467 FAM58AQ8N1B3 248 aa9.91□□□□□ -0.82
SHMT2-212ENST00000554467 PRR18Q8N4B5 295 aa9.91□□□□□ -0.82
SHMT2-212ENST00000554467 SUMF2Q8NBJ7 301 aa9.91□□□□□ -0.82
SHMT2-212ENST00000554467 PIEZO1Q92508 2521 aa9.91□□□□□ -0.82
SHMT2-212ENST00000554467 WNT9BO14905 357 aa9.91□□□□□ -0.82
SHMT2-212ENST00000554467 IGKV3-15P01624 115 aa9.91□□□□□ -0.82
SHMT2-212ENST00000554467 DTYMKP23919 212 aa9.91□□□□□ -0.82
SHMT2-212ENST00000554467 ASCL1P50553 236 aa9.91□□□□□ -0.82
SHMT2-212ENST00000554467 PIGPP57054 158 aa9.91□□□□□ -0.82
SHMT2-212ENST00000554467 NUTF2P61970 127 aaKnown RBP9.91□□□□□ -0.82
SHMT2-212ENST00000554467 PPA1Q15181 289 aa9.91□□□□□ -0.82
SHMT2-212ENST00000554467 Q6ZRG5 221 aa9.91□□□□□ -0.82
SHMT2-212ENST00000554467 C22orf34Q6ZV56 151 aa9.91□□□□□ -0.82
SHMT2-212ENST00000554467 OR14J1Q9UGF5 321 aa9.91□□□□□ -0.82
SHMT2-212ENST00000554467 ITPR1Q14643 2758 aa9.9□□□□□ -0.82
SHMT2-212ENST00000554467 TRAV24A0A0B4J272 114 aa9.9□□□□□ -0.82
SHMT2-212ENST00000554467 IGHV1-18A0A0C4DH31 117 aa9.9□□□□□ -0.82
SHMT2-212ENST00000554467 HIST1H2BKO60814 126 aa9.9□□□□□ -0.82
SHMT2-212ENST00000554467 CA11O75493 328 aa9.9□□□□□ -0.82
SHMT2-212ENST00000554467 IFNA17P01571 189 aa9.9□□□□□ -0.82
SHMT2-212ENST00000554467 HIST1H2BJP06899 126 aa9.9□□□□□ -0.82
SHMT2-212ENST00000554467 FAM87AP0C7U9 286 aa9.9□□□□□ -0.82
SHMT2-212ENST00000554467 ZNF728P0DKX0 622 aa9.9□□□□□ -0.82
SHMT2-212ENST00000554467 AADACP22760 399 aa9.9□□□□□ -0.82
SHMT2-212ENST00000554467 HIST1H2BOP23527 126 aa9.9□□□□□ -0.82
SHMT2-212ENST00000554467 HIST1H2BBP33778 126 aa9.9□□□□□ -0.82
SHMT2-212ENST00000554467 RPS10P46783 165 aaKnown RBP9.9□□□□□ -0.82
SHMT2-212ENST00000554467 HIST1H2BDP58876 126 aa9.9□□□□□ -0.82
SHMT2-212ENST00000554467 HIST1H2BCP62807 126 aa9.9□□□□□ -0.82
SHMT2-212ENST00000554467 CYCSP99999 105 aaKnown RBP9.9□□□□□ -0.82
SHMT2-212ENST00000554467 HIST2H2BEQ16778 126 aa9.9□□□□□ -0.82
SHMT2-212ENST00000554467 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.9□□□□□ -0.82
SHMT2-212ENST00000554467 PRAMEF6Q5VXH4 476 aa9.9□□□□□ -0.82
SHMT2-212ENST00000554467 HIST3H2BBQ8N257 126 aa9.9□□□□□ -0.82
SHMT2-212ENST00000554467 HIST1H2BHQ93079 126 aa9.9□□□□□ -0.82
SHMT2-212ENST00000554467 HIST1H2BNQ99877 126 aa9.9□□□□□ -0.82
SHMT2-212ENST00000554467 HIST1H2BMQ99879 126 aa9.9□□□□□ -0.82
SHMT2-212ENST00000554467 NMES1Q9C002 83 aa9.9□□□□□ -0.82
SHMT2-212ENST00000554467 TAF9BQ9HBM6 251 aa9.9□□□□□ -0.82
SHMT2-212ENST00000554467 MMP24Q9Y5R2 645 aa9.9□□□□□ -0.82
SHMT2-212ENST00000554467 MBD3L4A6NDZ8 208 aaPredicted RBP9.9□□□□□ -0.82
SHMT2-212ENST00000554467 MBD3L3A6NE82 208 aaPredicted RBP9.9□□□□□ -0.82
SHMT2-212ENST00000554467 MBD3L5A6NJ08 208 aaPredicted RBP9.9□□□□□ -0.82
SHMT2-212ENST00000554467 OR5B21A6NL26 309 aa9.9□□□□□ -0.82
SHMT2-212ENST00000554467 ZNF727A8MUV8 499 aa9.9□□□□□ -0.82
SHMT2-212ENST00000554467 M0R1B8 84 aa9.9□□□□□ -0.82
SHMT2-212ENST00000554467 MLNRO43193 412 aa9.9□□□□□ -0.82
SHMT2-212ENST00000554467 GFRA3O60609 400 aa9.9□□□□□ -0.82
SHMT2-212ENST00000554467 CXCL1P09341 107 aa9.9□□□□□ -0.82
SHMT2-212ENST00000554467 SNCAP37840 140 aa9.9□□□□□ -0.82
SHMT2-212ENST00000554467 FAHD2BQ6P2I3 314 aaPredicted RBP9.9□□□□□ -0.82
SHMT2-212ENST00000554467 FAM180AQ6UWF9 173 aa9.9□□□□□ -0.82
SHMT2-212ENST00000554467 LRP11Q86VZ4 500 aa9.9□□□□□ -0.82
SHMT2-212ENST00000554467 MBD3L2Q8NHZ7 208 aaPredicted RBP9.9□□□□□ -0.82
SHMT2-212ENST00000554467 FAHD2AQ96GK7 314 aa9.9□□□□□ -0.82
SHMT2-212ENST00000554467 RTL8AQ9BWD3 113 aa9.9□□□□□ -0.82
SHMT2-212ENST00000554467 PARP11Q9NR21 331 aa9.9□□□□□ -0.82
SHMT2-212ENST00000554467 DUSP13Q9UII6 198 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms