RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 FAM222AQ5U5X8 452 aa3.05□□□□□ -1.92
SCFD1-211ENST00000554437 VN1R4Q7Z5H5 301 aa3.05□□□□□ -1.92
SCFD1-211ENST00000554437 LINC00596Q86U02 117 aa3.05□□□□□ -1.92
SCFD1-211ENST00000554437 C1orf158Q8N1D5 194 aa3.05□□□□□ -1.92
SCFD1-211ENST00000554437 NATD1Q8N6N6 113 aa3.05□□□□□ -1.92
SCFD1-211ENST00000554437 ZIC4Q8N9L1 334 aa3.05□□□□□ -1.92
SCFD1-211ENST00000554437 OR2M7Q8NG81 312 aa3.05□□□□□ -1.92
SCFD1-211ENST00000554437 OR4X1Q8NH49 305 aa3.05□□□□□ -1.92
SCFD1-211ENST00000554437 OR52P1PQ8NH57 321 aa3.05□□□□□ -1.92
SCFD1-211ENST00000554437 JOSD2Q8TAC2 188 aa3.05□□□□□ -1.92
SCFD1-211ENST00000554437 KCTD4Q8WVF5 259 aa3.05□□□□□ -1.92
SCFD1-211ENST00000554437 ZHX1-C8orf76Q96EF9 292 aa3.05□□□□□ -1.92
SCFD1-211ENST00000554437 CPNE2Q96FN4 548 aaPredicted RBP3.05□□□□□ -1.92
SCFD1-211ENST00000554437 SFRP2Q96HF1 295 aa3.05□□□□□ -1.92
SCFD1-211ENST00000554437 DIRAS2Q96HU8 199 aa3.05□□□□□ -1.92
SCFD1-211ENST00000554437 YPEL4Q96NS1 127 aa3.05□□□□□ -1.92
SCFD1-211ENST00000554437 OR52E6Q96RD3 313 aa3.05□□□□□ -1.92
SCFD1-211ENST00000554437 C6orf62Q9GZU0 229 aaPredicted RBP3.05□□□□□ -1.92
SCFD1-211ENST00000554437 ZNF430Q9H8G1 570 aaPredicted RBP3.05□□□□□ -1.92
SCFD1-211ENST00000554437 HES4Q9HCC6 221 aa3.05□□□□□ -1.92
SCFD1-211ENST00000554437 OPTCQ9UBM4 332 aa3.05□□□□□ -1.92
SCFD1-211ENST00000554437 CARHSP1Q9Y2V2 147 aaKnown RBP3.05□□□□□ -1.92
SCFD1-211ENST00000554437 IGKV2-28A0A075B6P5 120 aa3.04□□□□□ -1.92
SCFD1-211ENST00000554437 PQLC2LA1A4F0 135 aa3.04□□□□□ -1.92
SCFD1-211ENST00000554437 C5orf49A4QMS7 147 aa3.04□□□□□ -1.92
SCFD1-211ENST00000554437 EEF1E1-BLOC1S5C9J1V9 151 aa3.04□□□□□ -1.92
SCFD1-211ENST00000554437 INS-IGF2F8WCM5 200 aa3.04□□□□□ -1.92
SCFD1-211ENST00000554437 EEF1E1O43324 174 aaKnown RBP3.04□□□□□ -1.92
SCFD1-211ENST00000554437 ANGPTL7O43827 346 aa3.04□□□□□ -1.92
SCFD1-211ENST00000554437 ZNF324O75467 553 aaPredicted RBP3.04□□□□□ -1.92
SCFD1-211ENST00000554437 GCM2O75603 506 aaPredicted RBP3.04□□□□□ -1.92
SCFD1-211ENST00000554437 STK16O75716 305 aa3.04□□□□□ -1.92
SCFD1-211ENST00000554437 SLC25A14O95258 325 aaPredicted RBP3.04□□□□□ -1.92
SCFD1-211ENST00000554437 IFNA1P01562 189 aa3.04□□□□□ -1.92
SCFD1-211ENST00000554437 IGKV2D-28P01615 120 aa3.04□□□□□ -1.92
SCFD1-211ENST00000554437 CRYBA1P05813 215 aa3.04□□□□□ -1.92
SCFD1-211ENST00000554437 SCGB1C2P0DMR2 95 aa3.04□□□□□ -1.92
SCFD1-211ENST00000554437 CXCL5P42830 114 aa3.04□□□□□ -1.92
SCFD1-211ENST00000554437 GZMMP51124 257 aa3.04□□□□□ -1.92
SCFD1-211ENST00000554437 MP68P56378 58 aa3.04□□□□□ -1.92
SCFD1-211ENST00000554437 SNAP25P60880 206 aa3.04□□□□□ -1.92
SCFD1-211ENST00000554437 MESTQ5EB52 335 aa3.04□□□□□ -1.92
SCFD1-211ENST00000554437 GLYATQ6IB77 296 aa3.04□□□□□ -1.92
SCFD1-211ENST00000554437 KRTAP5-5Q701N2 237 aaPredicted RBP3.04□□□□□ -1.92
SCFD1-211ENST00000554437 PHF13Q86YI8 300 aaPredicted RBP3.04□□□□□ -1.92
SCFD1-211ENST00000554437 SAXO1Q8IYX7 474 aa3.04□□□□□ -1.92
SCFD1-211ENST00000554437 ZNF645Q8N7E2 425 aa3.04□□□□□ -1.92
SCFD1-211ENST00000554437 MCFD2Q8NI22 146 aa3.04□□□□□ -1.92
SCFD1-211ENST00000554437 SCGB1C1Q8TD33 95 aa3.04□□□□□ -1.92
SCFD1-211ENST00000554437 ACY3Q96HD9 319 aa3.04□□□□□ -1.92
SCFD1-211ENST00000554437 SLC35G5Q96KT7 338 aa3.04□□□□□ -1.92
SCFD1-211ENST00000554437 C18orf15Q96N68 181 aa3.04□□□□□ -1.92
SCFD1-211ENST00000554437 OR52B2Q96RD2 323 aa3.04□□□□□ -1.92
SCFD1-211ENST00000554437 CAMK2N2Q96S95 79 aa3.04□□□□□ -1.92
SCFD1-211ENST00000554437 GNB1LQ9BYB4 327 aa3.04□□□□□ -1.92
SCFD1-211ENST00000554437 TBL1XR1Q9BZK7 514 aa3.04□□□□□ -1.92
SCFD1-211ENST00000554437 TBX21Q9UL17 535 aa3.04□□□□□ -1.92
SCFD1-211ENST00000554437 NDUFAF1Q9Y375 327 aa3.04□□□□□ -1.92
SCFD1-211ENST00000554437 GMNCA6NCL1 334 aa3.03□□□□□ -1.92
SCFD1-211ENST00000554437 OR6C6A6NF89 314 aa3.03□□□□□ -1.92
SCFD1-211ENST00000554437 OR4C46A6NHA9 309 aa3.03□□□□□ -1.92
SCFD1-211ENST00000554437 FAM159BA6NKW6 160 aa3.03□□□□□ -1.92
SCFD1-211ENST00000554437 TCF21O43680 179 aa3.03□□□□□ -1.92
SCFD1-211ENST00000554437 MED6O75586 246 aa3.03□□□□□ -1.92
SCFD1-211ENST00000554437 IGLV2-8P01709 118 aa3.03□□□□□ -1.92
SCFD1-211ENST00000554437 SOD3P08294 240 aa3.03□□□□□ -1.92
SCFD1-211ENST00000554437 ESDP10768 282 aa3.03□□□□□ -1.92
SCFD1-211ENST00000554437 MARCKSL1P49006 195 aa3.03□□□□□ -1.92
SCFD1-211ENST00000554437 UBE2AP49459 152 aa3.03□□□□□ -1.92
SCFD1-211ENST00000554437 MNAT1P51948 309 aa3.03□□□□□ -1.92
SCFD1-211ENST00000554437 RAB2AP61019 212 aa3.03□□□□□ -1.92
SCFD1-211ENST00000554437 RPS24P62847 133 aaKnown RBP3.03□□□□□ -1.92
SCFD1-211ENST00000554437 PRDX4Q13162 271 aa3.03□□□□□ -1.92
SCFD1-211ENST00000554437 PMAIP1Q13794 54 aa3.03□□□□□ -1.92
SCFD1-211ENST00000554437 TSNQ15631 228 aaKnown RBP3.03□□□□□ -1.92
SCFD1-211ENST00000554437 SNRNP35Q16560 246 aaKnown RBP3.03□□□□□ -1.92
SCFD1-211ENST00000554437 HENMT1Q5T8I9 393 aaKnown RBP3.03□□□□□ -1.92
SCFD1-211ENST00000554437 FAM78BQ5VT40 261 aa3.03□□□□□ -1.92
SCFD1-211ENST00000554437 LCN8Q6JVE9 175 aa3.03□□□□□ -1.92
SCFD1-211ENST00000554437 ZNF773Q6PK81 442 aa3.03□□□□□ -1.92
SCFD1-211ENST00000554437 SHISA6Q6ZSJ9 500 aa3.03□□□□□ -1.92
SCFD1-211ENST00000554437 ZNF550Q7Z398 422 aa3.03□□□□□ -1.92
SCFD1-211ENST00000554437 C12orf29Q8N999 325 aa3.03□□□□□ -1.92
SCFD1-211ENST00000554437 COQ8AQ8NI60 647 aa3.03□□□□□ -1.92
SCFD1-211ENST00000554437 BORCS7Q96B45 105 aa3.03□□□□□ -1.92
SCFD1-211ENST00000554437 OLFM3Q96PB7 478 aa3.03□□□□□ -1.92
SCFD1-211ENST00000554437 OR7D2Q96RA2 312 aa3.03□□□□□ -1.92
SCFD1-211ENST00000554437 CHAC1Q9BUX1 264 aa3.03□□□□□ -1.92
SCFD1-211ENST00000554437 GGTLC1Q9BX51 225 aa3.03□□□□□ -1.92
SCFD1-211ENST00000554437 ULBP3Q9BZM4 244 aa3.03□□□□□ -1.92
SCFD1-211ENST00000554437 ZNF436Q9C0F3 470 aaPredicted RBP3.03□□□□□ -1.92
SCFD1-211ENST00000554437 EIF5A2Q9GZV4 153 aaKnown RBP3.03□□□□□ -1.92
SCFD1-211ENST00000554437 CDC42EP4Q9H3Q1 356 aaKnown RBP3.03□□□□□ -1.92
SCFD1-211ENST00000554437 BTRCQ9Y297 605 aa3.03□□□□□ -1.92
SCFD1-211ENST00000554437 MTUS2Q5JR59 1369 aa3.02□□□□□ -1.93
SCFD1-211ENST00000554437 IGHV3-66A0A0C4DH42 116 aa3.02□□□□□ -1.93
SCFD1-211ENST00000554437 A0A1B0GV50 99 aa3.02□□□□□ -1.93
SCFD1-211ENST00000554437 VPS37CA5D8V6 355 aaPredicted RBP3.02□□□□□ -1.93
SCFD1-211ENST00000554437 OR11H12B2RN74 326 aa3.02□□□□□ -1.93
SCFD1-211ENST00000554437 PPP5D1E7EU14 171 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms