RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 CITED2Q99967 270 aaPredicted RBP8.28□□□□□ -1.08
PTCD2P1-201ENST00000554393 TM2D1Q9BX74 207 aa8.28□□□□□ -1.08
PTCD2P1-201ENST00000554393 TMEM59Q9BXS4 323 aa8.28□□□□□ -1.08
PTCD2P1-201ENST00000554393 IGHV1-3A0A0C4DH29 117 aa8.27□□□□□ -1.09
PTCD2P1-201ENST00000554393 BPNT1O95861 308 aa8.27□□□□□ -1.09
PTCD2P1-201ENST00000554393 MPIG6BO95866 241 aa8.27□□□□□ -1.09
PTCD2P1-201ENST00000554393 HBZP02008 142 aa8.27□□□□□ -1.09
PTCD2P1-201ENST00000554393 RCC1P18754 421 aaPredicted RBP8.27□□□□□ -1.09
PTCD2P1-201ENST00000554393 CHATP28329 748 aa8.27□□□□□ -1.09
PTCD2P1-201ENST00000554393 HTR2CP28335 458 aa8.27□□□□□ -1.09
PTCD2P1-201ENST00000554393 RANBP1P43487 201 aa8.27□□□□□ -1.09
PTCD2P1-201ENST00000554393 RPS27AP62979 156 aaKnown RBP8.27□□□□□ -1.09
PTCD2P1-201ENST00000554393 QRFPP83859 136 aa8.27□□□□□ -1.09
PTCD2P1-201ENST00000554393 HTD2P86397 168 aa8.27□□□□□ -1.09
PTCD2P1-201ENST00000554393 HES1Q14469 280 aa8.27□□□□□ -1.09
PTCD2P1-201ENST00000554393 TBCEQ15813 527 aaPredicted RBP8.27□□□□□ -1.09
PTCD2P1-201ENST00000554393 LY6G6FQ5SQ64 297 aa8.27□□□□□ -1.09
PTCD2P1-201ENST00000554393 IZUMO2Q6UXV1 221 aa8.27□□□□□ -1.09
PTCD2P1-201ENST00000554393 C8orf86Q6ZUL3 223 aa8.27□□□□□ -1.09
PTCD2P1-201ENST00000554393 CENPVQ7Z7K6 275 aaPredicted RBP8.27□□□□□ -1.09
PTCD2P1-201ENST00000554393 C5orf56Q8N8D9 126 aa8.27□□□□□ -1.09
PTCD2P1-201ENST00000554393 ZNF439Q8NDP4 499 aa8.27□□□□□ -1.09
PTCD2P1-201ENST00000554393 OR4X2Q8NGF9 303 aa8.27□□□□□ -1.09
PTCD2P1-201ENST00000554393 OR4K15Q8NH41 348 aa8.27□□□□□ -1.09
PTCD2P1-201ENST00000554393 RTN4IP1Q8WWV3 396 aaPredicted RBP8.27□□□□□ -1.09
PTCD2P1-201ENST00000554393 FAM46BQ96A09 425 aa8.27□□□□□ -1.09
PTCD2P1-201ENST00000554393 NEDD4LQ96PU5 975 aa8.27□□□□□ -1.09
PTCD2P1-201ENST00000554393 KCNIP1Q9NZI2 227 aa8.27□□□□□ -1.09
PTCD2P1-201ENST00000554393 GNG12Q9UBI6 72 aa8.27□□□□□ -1.09
PTCD2P1-201ENST00000554393 JPT1Q9UK76 154 aa8.27□□□□□ -1.09
PTCD2P1-201ENST00000554393 BLOC1S6Q9UL45 172 aa8.27□□□□□ -1.09
PTCD2P1-201ENST00000554393 LRRC42Q9Y546 428 aa8.27□□□□□ -1.09
PTCD2P1-201ENST00000554393 IGHV3-43A0A0B4J1X8 118 aa8.26□□□□□ -1.09
PTCD2P1-201ENST00000554393 A0A1W2PPE3 182 aa8.26□□□□□ -1.09
PTCD2P1-201ENST00000554393 UBE2QL1A1L167 161 aa8.26□□□□□ -1.09
PTCD2P1-201ENST00000554393 TMEM14DPA8MWL7 114 aa8.26□□□□□ -1.09
PTCD2P1-201ENST00000554393 SLC17A2O00624 439 aa8.26□□□□□ -1.09
PTCD2P1-201ENST00000554393 EREGO14944 169 aa8.26□□□□□ -1.09
PTCD2P1-201ENST00000554393 IGKV1D-33P01593 117 aa8.26□□□□□ -1.09
PTCD2P1-201ENST00000554393 IGKV1-33P01594 117 aa8.26□□□□□ -1.09
PTCD2P1-201ENST00000554393 HSMCR30P0CW71 290 aa8.26□□□□□ -1.09
PTCD2P1-201ENST00000554393 IGHV3-43DP0DP04 118 aa8.26□□□□□ -1.09
PTCD2P1-201ENST00000554393 CD1BP29016 333 aa8.26□□□□□ -1.09
PTCD2P1-201ENST00000554393 UNC119Q13432 240 aa8.26□□□□□ -1.09
PTCD2P1-201ENST00000554393 NSUN5P1Q3KNT7 163 aa8.26□□□□□ -1.09
PTCD2P1-201ENST00000554393 KPRPQ5T749 579 aaPredicted RBP8.26□□□□□ -1.09
PTCD2P1-201ENST00000554393 TMEM91Q6ZNR0 172 aa8.26□□□□□ -1.09
PTCD2P1-201ENST00000554393 OR2W3Q7Z3T1 314 aa8.26□□□□□ -1.09
PTCD2P1-201ENST00000554393 TGIF2LXQ8IUE1 241 aa8.26□□□□□ -1.09
PTCD2P1-201ENST00000554393 Q8N6K4 173 aa8.26□□□□□ -1.09
PTCD2P1-201ENST00000554393 OR8H1Q8NGG4 311 aa8.26□□□□□ -1.09
PTCD2P1-201ENST00000554393 OR2T10Q8NGZ9 312 aa8.26□□□□□ -1.09
PTCD2P1-201ENST00000554393 OR1L1Q8NH94 360 aa8.26□□□□□ -1.09
PTCD2P1-201ENST00000554393 UBALD1Q8TB05 177 aa8.26□□□□□ -1.09
PTCD2P1-201ENST00000554393 MRPL30Q8TCC3 161 aaKnown RBP8.26□□□□□ -1.09
PTCD2P1-201ENST00000554393 R3HDM4Q96D70 268 aa8.26□□□□□ -1.09
PTCD2P1-201ENST00000554393 MGLLQ99685 303 aa8.26□□□□□ -1.09
PTCD2P1-201ENST00000554393 CCDC90BQ9GZT6 254 aa8.26□□□□□ -1.09
PTCD2P1-201ENST00000554393 TAF9BQ9HBM6 251 aa8.26□□□□□ -1.09
PTCD2P1-201ENST00000554393 ACOT13Q9NPJ3 140 aa8.26□□□□□ -1.09
PTCD2P1-201ENST00000554393 RAB26Q9ULW5 256 aa8.26□□□□□ -1.09
PTCD2P1-201ENST00000554393 TSSC4Q9Y5U2 329 aaPredicted RBP8.26□□□□□ -1.09
PTCD2P1-201ENST00000554393 EPPK1P58107 5090 aaKnown RBP8.25□□□□□ -1.09
PTCD2P1-201ENST00000554393 ERICH4A6NGS2 130 aa8.25□□□□□ -1.09
PTCD2P1-201ENST00000554393 LANCL1O43813 399 aa8.25□□□□□ -1.09
PTCD2P1-201ENST00000554393 RGS11O94810 467 aa8.25□□□□□ -1.09
PTCD2P1-201ENST00000554393 IGHG2P01859 326 aa8.25□□□□□ -1.09
PTCD2P1-201ENST00000554393 VHLP40337 213 aa8.25□□□□□ -1.09
PTCD2P1-201ENST00000554393 REG1BP48304 166 aa8.25□□□□□ -1.09
PTCD2P1-201ENST00000554393 PSMD7P51665 324 aa8.25□□□□□ -1.09
PTCD2P1-201ENST00000554393 RPS25P62851 125 aaKnown RBP8.25□□□□□ -1.09
PTCD2P1-201ENST00000554393 BEAN1Q3B7T3 259 aa8.25□□□□□ -1.09
PTCD2P1-201ENST00000554393 MORN2Q502X0 79 aa8.25□□□□□ -1.09
PTCD2P1-201ENST00000554393 CT45A1Q5HYN5 189 aa8.25□□□□□ -1.09
PTCD2P1-201ENST00000554393 TCTEX1D4Q5JR98 221 aa8.25□□□□□ -1.09
PTCD2P1-201ENST00000554393 NKAPLQ5M9Q1 402 aa8.25□□□□□ -1.09
PTCD2P1-201ENST00000554393 OR10K2Q6IF99 312 aa8.25□□□□□ -1.09
PTCD2P1-201ENST00000554393 MOB1BQ7L9L4 216 aa8.25□□□□□ -1.09
PTCD2P1-201ENST00000554393 ZNF367Q7RTV3 350 aa8.25□□□□□ -1.09
PTCD2P1-201ENST00000554393 MOB3BQ86TA1 216 aa8.25□□□□□ -1.09
PTCD2P1-201ENST00000554393 LYG1Q8N1E2 194 aa8.25□□□□□ -1.09
PTCD2P1-201ENST00000554393 PRR18Q8N4B5 295 aa8.25□□□□□ -1.09
PTCD2P1-201ENST00000554393 CT45A3Q8NHU0 189 aa8.25□□□□□ -1.09
PTCD2P1-201ENST00000554393 CHPT1Q8WUD6 406 aa8.25□□□□□ -1.09
PTCD2P1-201ENST00000554393 TMEM203Q969S6 136 aa8.25□□□□□ -1.09
PTCD2P1-201ENST00000554393 EAF1Q96JC9 268 aaPredicted RBP8.25□□□□□ -1.09
PTCD2P1-201ENST00000554393 CNBD2Q96M20 576 aa8.25□□□□□ -1.09
PTCD2P1-201ENST00000554393 SULT4A1Q9BR01 284 aa8.25□□□□□ -1.09
PTCD2P1-201ENST00000554393 URM1Q9BTM9 101 aaKnown RBP8.25□□□□□ -1.09
PTCD2P1-201ENST00000554393 OR2S2Q9NQN1 319 aa8.25□□□□□ -1.09
PTCD2P1-201ENST00000554393 LIN7CQ9NUP9 197 aaKnown RBP8.25□□□□□ -1.09
PTCD2P1-201ENST00000554393 TRBV6-6A0A0A6YYG2 114 aa8.24□□□□□ -1.09
PTCD2P1-201ENST00000554393 TCRBV4S1A1TA0A5B7 111 aa8.24□□□□□ -1.09
PTCD2P1-201ENST00000554393 PSMB11A5LHX3 300 aa8.24□□□□□ -1.09
PTCD2P1-201ENST00000554393 SH2D7A6NKC9 451 aaPredicted RBP8.24□□□□□ -1.09
PTCD2P1-201ENST00000554393 SLC31A2O15432 143 aa8.24□□□□□ -1.09
PTCD2P1-201ENST00000554393 YPEL1O60688 119 aa8.24□□□□□ -1.09
PTCD2P1-201ENST00000554393 MRPS14O60783 128 aaKnown RBP8.24□□□□□ -1.09
PTCD2P1-201ENST00000554393 NAPSAO96009 420 aa8.24□□□□□ -1.09
PTCD2P1-201ENST00000554393 MOSP00540 346 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms