RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 MEIS3P1A6NDR6 274 aa11.38□□□□□ -0.59
SPTLC2-202ENST00000554365 RNASEK-C17orf49H0YIS7 233 aa11.38□□□□□ -0.59
SPTLC2-202ENST00000554365 GABARAPH6UMI1 98 aa11.38□□□□□ -0.59
SPTLC2-202ENST00000554365 SULT1C2O00338 296 aa11.38□□□□□ -0.59
SPTLC2-202ENST00000554365 NPFFO15130 113 aa11.38□□□□□ -0.59
SPTLC2-202ENST00000554365 NDUFB3O43676 98 aa11.38□□□□□ -0.59
SPTLC2-202ENST00000554365 LPLP06858 475 aa11.38□□□□□ -0.59
SPTLC2-202ENST00000554365 FCGR3AP08637 254 aa11.38□□□□□ -0.59
SPTLC2-202ENST00000554365 CD3GP09693 182 aa11.38□□□□□ -0.59
SPTLC2-202ENST00000554365 CD40LGP29965 261 aa11.38□□□□□ -0.59
SPTLC2-202ENST00000554365 ERP29P30040 261 aaKnown RBP11.38□□□□□ -0.59
SPTLC2-202ENST00000554365 GLIPR1P48060 266 aa11.38□□□□□ -0.59
SPTLC2-202ENST00000554365 PPP5CP53041 499 aa11.38□□□□□ -0.59
SPTLC2-202ENST00000554365 GNG2P59768 71 aa11.38□□□□□ -0.59
SPTLC2-202ENST00000554365 MRPS10P82664 201 aaKnown RBP11.38□□□□□ -0.59
SPTLC2-202ENST00000554365 KLRD1Q13241 179 aa11.38□□□□□ -0.59
SPTLC2-202ENST00000554365 ARFRP1Q13795 201 aa11.38□□□□□ -0.59
SPTLC2-202ENST00000554365 BAK1Q16611 211 aa11.38□□□□□ -0.59
SPTLC2-202ENST00000554365 FBLN7Q53RD9 439 aa11.38□□□□□ -0.59
SPTLC2-202ENST00000554365 SLC35E4Q6ICL7 350 aa11.38□□□□□ -0.59
SPTLC2-202ENST00000554365 TCF23Q7RTU1 214 aa11.38□□□□□ -0.59
SPTLC2-202ENST00000554365 TRAPPC6BQ86SZ2 158 aa11.38□□□□□ -0.59
SPTLC2-202ENST00000554365 TPRX1Q8N7U7 411 aa11.38□□□□□ -0.59
SPTLC2-202ENST00000554365 GDPD1Q8N9F7 314 aa11.38□□□□□ -0.59
SPTLC2-202ENST00000554365 LY6G5BQ8NDX9 201 aa11.38□□□□□ -0.59
SPTLC2-202ENST00000554365 NEK7Q8TDX7 302 aa11.38□□□□□ -0.59
SPTLC2-202ENST00000554365 C15orf40Q8WUR7 153 aa11.38□□□□□ -0.59
SPTLC2-202ENST00000554365 H1FXQ92522 213 aaKnown RBP11.38□□□□□ -0.59
SPTLC2-202ENST00000554365 OCSTAMPQ9BR26 566 aa11.38□□□□□ -0.59
SPTLC2-202ENST00000554365 KIF25Q9UIL4 384 aa11.38□□□□□ -0.59
SPTLC2-202ENST00000554365 KIAA2026Q5HYC2 2103 aa11.38□□□□□ -0.59
SPTLC2-202ENST00000554365 PRB2P02812 416 aaPredicted RBP11.37□□□□□ -0.59
SPTLC2-202ENST00000554365 DTYMKP23919 212 aa11.37□□□□□ -0.59
SPTLC2-202ENST00000554365 SAA4P35542 130 aa11.37□□□□□ -0.59
SPTLC2-202ENST00000554365 P2RX3P56373 397 aa11.37□□□□□ -0.59
SPTLC2-202ENST00000554365 EDDM3AQ14507 147 aa11.37□□□□□ -0.59
SPTLC2-202ENST00000554365 BEAN1Q3B7T3 259 aa11.37□□□□□ -0.59
SPTLC2-202ENST00000554365 KRBOX4Q5JUW0 171 aa11.37□□□□□ -0.59
SPTLC2-202ENST00000554365 HIST2H2BDQ6DRA6 164 aa11.37□□□□□ -0.59
SPTLC2-202ENST00000554365 C5orf24Q7Z6I8 188 aa11.37□□□□□ -0.59
SPTLC2-202ENST00000554365 Q8N402 240 aa11.37□□□□□ -0.59
SPTLC2-202ENST00000554365 PNKDQ8N490 385 aa11.37□□□□□ -0.59
SPTLC2-202ENST00000554365 GVQW1Q8N7I0 195 aa11.37□□□□□ -0.59
SPTLC2-202ENST00000554365 OR5D13Q8NGL4 314 aa11.37□□□□□ -0.59
SPTLC2-202ENST00000554365 OR4K15Q8NH41 348 aa11.37□□□□□ -0.59
SPTLC2-202ENST00000554365 PPP1R35Q8TAP8 253 aa11.37□□□□□ -0.59
SPTLC2-202ENST00000554365 DCTN5Q9BTE1 182 aa11.37□□□□□ -0.59
SPTLC2-202ENST00000554365 NCOR1P1Q9H4R4 102 aa11.37□□□□□ -0.59
SPTLC2-202ENST00000554365 C12orf4Q9NQ89 552 aa11.37□□□□□ -0.59
SPTLC2-202ENST00000554365 MBNL3Q9NUK0 354 aaKnown RBP11.37□□□□□ -0.59
SPTLC2-202ENST00000554365 ING3Q9NXR8 418 aa11.37□□□□□ -0.59
SPTLC2-202ENST00000554365 KLK11Q9UBX7 282 aa11.37□□□□□ -0.59
SPTLC2-202ENST00000554365 MTFP1Q9UDX5 166 aa11.37□□□□□ -0.59
SPTLC2-202ENST00000554365 ZNF230Q9UIE0 474 aaPredicted RBP11.37□□□□□ -0.59
SPTLC2-202ENST00000554365 IGKV1D-8A0A087WSZ0 117 aa11.36□□□□□ -0.59
SPTLC2-202ENST00000554365 TRAV39A0A0B4J263 110 aa11.36□□□□□ -0.59
SPTLC2-202ENST00000554365 TMEM30CPA0ZSE6 113 aa11.36□□□□□ -0.59
SPTLC2-202ENST00000554365 ORC5O43913 435 aa11.36□□□□□ -0.59
SPTLC2-202ENST00000554365 CGB3P0DN86 165 aa11.36□□□□□ -0.59
SPTLC2-202ENST00000554365 CGB7P0DN87 165 aa11.36□□□□□ -0.59
SPTLC2-202ENST00000554365 NDUFB7P17568 137 aa11.36□□□□□ -0.59
SPTLC2-202ENST00000554365 NAT1P18440 290 aa11.36□□□□□ -0.59
SPTLC2-202ENST00000554365 IFITM3Q01628 133 aa11.36□□□□□ -0.59
SPTLC2-202ENST00000554365 HERPUD1Q15011 391 aa11.36□□□□□ -0.59
SPTLC2-202ENST00000554365 LRRC10Q5BKY1 277 aa11.36□□□□□ -0.59
SPTLC2-202ENST00000554365 GDPD3Q7L5L3 318 aa11.36□□□□□ -0.59
SPTLC2-202ENST00000554365 HOGA1Q86XE5 327 aa11.36□□□□□ -0.59
SPTLC2-202ENST00000554365 Q8N7P7 452 aa11.36□□□□□ -0.59
SPTLC2-202ENST00000554365 C11orf44Q8N8P7 122 aa11.36□□□□□ -0.59
SPTLC2-202ENST00000554365 OR5R1Q8NH85 324 aa11.36□□□□□ -0.59
SPTLC2-202ENST00000554365 FCAMRQ8WWV6 532 aa11.36□□□□□ -0.59
SPTLC2-202ENST00000554365 MAFIPQ8WZ33 124 aa11.36□□□□□ -0.59
SPTLC2-202ENST00000554365 SNAPC3Q92966 411 aa11.36□□□□□ -0.59
SPTLC2-202ENST00000554365 RIMS4Q9H426 269 aaPredicted RBP11.36□□□□□ -0.59
SPTLC2-202ENST00000554365 Q9N2K0 584 aa11.36□□□□□ -0.59
SPTLC2-202ENST00000554365 C19orf12Q9NSK7 152 aa11.36□□□□□ -0.59
SPTLC2-202ENST00000554365 SIGLEC9Q9Y336 463 aa11.36□□□□□ -0.59
SPTLC2-202ENST00000554365 TET2Q6N021 2002 aaPredicted RBP11.35□□□□□ -0.59
SPTLC2-202ENST00000554365 ODAMA1E959 279 aa11.35□□□□□ -0.59
SPTLC2-202ENST00000554365 GPR37O15354 613 aa11.35□□□□□ -0.59
SPTLC2-202ENST00000554365 IL7P13232 177 aa11.35□□□□□ -0.59
SPTLC2-202ENST00000554365 RCC1P18754 421 aaPredicted RBP11.35□□□□□ -0.59
SPTLC2-202ENST00000554365 GDNFP39905 211 aa11.35□□□□□ -0.59
SPTLC2-202ENST00000554365 CBX5P45973 191 aa11.35□□□□□ -0.59
SPTLC2-202ENST00000554365 SRSF7Q16629 238 aaKnown RBP eCLIP11.35□□□□□ -0.59
SPTLC2-202ENST00000554365 Q6ZS49 121 aa11.35□□□□□ -0.59
SPTLC2-202ENST00000554365 C1orf122Q6ZSJ8 110 aa11.35□□□□□ -0.59
SPTLC2-202ENST00000554365 LYSMD2Q8IV50 215 aa11.35□□□□□ -0.59
SPTLC2-202ENST00000554365 OR13A1Q8NGR1 328 aa11.35□□□□□ -0.59
SPTLC2-202ENST00000554365 CCDC107Q8WV48 283 aa11.35□□□□□ -0.59
SPTLC2-202ENST00000554365 THAP7Q9BT49 309 aaPredicted RBP11.35□□□□□ -0.59
SPTLC2-202ENST00000554365 CCDC32Q9BV29 185 aa11.35□□□□□ -0.59
SPTLC2-202ENST00000554365 MEIKINA0A087WXM9 373 aa11.34□□□□□ -0.59
SPTLC2-202ENST00000554365 MEX3AA1L020 520 aaKnown RBP11.34□□□□□ -0.59
SPTLC2-202ENST00000554365 H3BUX3 64 aa11.34□□□□□ -0.59
SPTLC2-202ENST00000554365 OPN1MWP04001 364 aa11.34□□□□□ -0.59
SPTLC2-202ENST00000554365 FCER2P06734 321 aa11.34□□□□□ -0.59
SPTLC2-202ENST00000554365 OPN1MW2P0DN77 364 aa11.34□□□□□ -0.59
SPTLC2-202ENST00000554365 OPN1MW3P0DN78 364 aa11.34□□□□□ -0.59
SPTLC2-202ENST00000554365 RCVRNP35243 200 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms