RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 TLNRD1Q9H1K6 362 aa1.52□□□□□ -2.17
SRP54-204ENST00000553923 IFI27L2Q9H2X8 130 aa1.52□□□□□ -2.17
SRP54-204ENST00000553923 NMNAT1Q9HAN9 279 aaPredicted RBP1.52□□□□□ -2.17
SRP54-204ENST00000553923 SND1-IT1Q9HBX3 110 aa1.52□□□□□ -2.17
SRP54-204ENST00000553923 HES4Q9HCC6 221 aa1.52□□□□□ -2.17
SRP54-204ENST00000553923 BATF3Q9NR55 127 aa1.52□□□□□ -2.17
SRP54-204ENST00000553923 TAC3Q9UHF0 121 aa1.52□□□□□ -2.17
SRP54-204ENST00000553923 ENOPH1Q9UHY7 261 aa1.52□□□□□ -2.17
SRP54-204ENST00000553923 LINC00527Q9UJ94 153 aa1.52□□□□□ -2.17
SRP54-204ENST00000553923 ZNF391Q9UJN7 358 aa1.52□□□□□ -2.17
SRP54-204ENST00000553923 ZNF223Q9UK11 482 aaPredicted RBP1.52□□□□□ -2.17
SRP54-204ENST00000553923 DNAJC12Q9UKB3 198 aa1.52□□□□□ -2.17
SRP54-204ENST00000553923 RLFQ13129 1914 aa1.52□□□□□ -2.17
SRP54-204ENST00000553923 ZCCHC6Q5VYS8 1495 aaKnown RBP1.51□□□□□ -2.17
SRP54-204ENST00000553923 CLUHO75153 1309 aa1.51□□□□□ -2.17
SRP54-204ENST00000553923 A0A087WUJ7 227 aa1.51□□□□□ -2.17
SRP54-204ENST00000553923 TRAV8-1A0A0A6YYK1 113 aa1.51□□□□□ -2.17
SRP54-204ENST00000553923 A0A1B0GV72 72 aa1.51□□□□□ -2.17
SRP54-204ENST00000553923 WI2-2373I1.2A0A1W2PRP0 233 aa1.51□□□□□ -2.17
SRP54-204ENST00000553923 OR5K4A6NMS3 321 aa1.51□□□□□ -2.17
SRP54-204ENST00000553923 EEF1E1-BLOC1S5C9J1V9 151 aa1.51□□□□□ -2.17
SRP54-204ENST00000553923 D6RAR5 112 aa1.51□□□□□ -2.17
SRP54-204ENST00000553923 H0YJW9 148 aa1.51□□□□□ -2.17
SRP54-204ENST00000553923 TMX2-CTNND1H3BSU7 103 aa1.51□□□□□ -2.17
SRP54-204ENST00000553923 EEF1E1O43324 174 aaKnown RBP1.51□□□□□ -2.17
SRP54-204ENST00000553923 TCF21O43680 179 aa1.51□□□□□ -2.17
SRP54-204ENST00000553923 GCM2O75603 506 aaPredicted RBP1.51□□□□□ -2.17
SRP54-204ENST00000553923 STK16O75716 305 aa1.51□□□□□ -2.17
SRP54-204ENST00000553923 CDRT1O95170 752 aa1.51□□□□□ -2.17
SRP54-204ENST00000553923 IGLV3-25P01717 112 aa1.51□□□□□ -2.17
SRP54-204ENST00000553923 HLA-DQB1P01920 261 aa1.51□□□□□ -2.17
SRP54-204ENST00000553923 TLX1NBP0CAT3 122 aa1.51□□□□□ -2.17
SRP54-204ENST00000553923 CD28P10747 220 aa1.51□□□□□ -2.17
SRP54-204ENST00000553923 ESDP10768 282 aa1.51□□□□□ -2.17
SRP54-204ENST00000553923 GTF2F2P13984 249 aa1.51□□□□□ -2.17
SRP54-204ENST00000553923 ZNF32P17041 273 aa1.51□□□□□ -2.17
SRP54-204ENST00000553923 NELFEP18615 380 aaKnown RBP1.51□□□□□ -2.17
SRP54-204ENST00000553923 ELK4P28324 431 aa1.51□□□□□ -2.17
SRP54-204ENST00000553923 DDTP30046 118 aa1.51□□□□□ -2.17
SRP54-204ENST00000553923 GABRA3P34903 492 aa1.51□□□□□ -2.17
SRP54-204ENST00000553923 TGFBR1P36897 503 aa1.51□□□□□ -2.17
SRP54-204ENST00000553923 RPL5P46777 297 aaKnown RBP1.51□□□□□ -2.17
SRP54-204ENST00000553923 PSMB3P49720 205 aa1.51□□□□□ -2.17
SRP54-204ENST00000553923 LHX2P50458 406 aa1.51□□□□□ -2.17
SRP54-204ENST00000553923 NUDT2P50583 147 aa1.51□□□□□ -2.17
SRP54-204ENST00000553923 CTBP2P56545 445 aa1.51□□□□□ -2.17
SRP54-204ENST00000553923 RIPPLY3P57055 190 aa1.51□□□□□ -2.17
SRP54-204ENST00000553923 TAS2R41P59536 307 aa1.51□□□□□ -2.17
SRP54-204ENST00000553923 HERVK_113P63121 156 aa1.51□□□□□ -2.17
SRP54-204ENST00000553923 FABP5Q01469 135 aa1.51□□□□□ -2.17
SRP54-204ENST00000553923 TMEM267Q0VDI3 215 aaPredicted RBP1.51□□□□□ -2.17
SRP54-204ENST00000553923 PMAIP1Q13794 54 aa1.51□□□□□ -2.17
SRP54-204ENST00000553923 IHHQ14623 411 aa1.51□□□□□ -2.17
SRP54-204ENST00000553923 POU6F1Q14863 301 aa1.51□□□□□ -2.17
SRP54-204ENST00000553923 PTGES3Q15185 160 aaKnown RBP1.51□□□□□ -2.17
SRP54-204ENST00000553923 MOGQ16653 247 aa1.51□□□□□ -2.17
SRP54-204ENST00000553923 ACOT6Q3I5F7 207 aaPredicted RBP1.51□□□□□ -2.17
SRP54-204ENST00000553923 LUZP6Q538Z0 58 aa1.51□□□□□ -2.17
SRP54-204ENST00000553923 KLHL12Q53G59 568 aa1.51□□□□□ -2.17
SRP54-204ENST00000553923 RNASE13Q5GAN3 156 aaKnown RBP1.51□□□□□ -2.17
SRP54-204ENST00000553923 FAM78BQ5VT40 261 aa1.51□□□□□ -2.17
SRP54-204ENST00000553923 OTPQ5XKR4 325 aa1.51□□□□□ -2.17
SRP54-204ENST00000553923 GLYATQ6IB77 296 aa1.51□□□□□ -2.17
SRP54-204ENST00000553923 LCN8Q6JVE9 175 aa1.51□□□□□ -2.17
SRP54-204ENST00000553923 C3orf33Q6P1S2 294 aa1.51□□□□□ -2.17
SRP54-204ENST00000553923 DHRS4L2Q6PKH6 230 aa1.51□□□□□ -2.17
SRP54-204ENST00000553923 VN1R4Q7Z5H5 301 aa1.51□□□□□ -2.17
SRP54-204ENST00000553923 DPPA2Q7Z7J5 298 aa1.51□□□□□ -2.17
SRP54-204ENST00000553923 TAC4Q86UU9 113 aa1.51□□□□□ -2.17
SRP54-204ENST00000553923 LRRC25Q8N386 305 aaPredicted RBP1.51□□□□□ -2.17
SRP54-204ENST00000553923 ARIH2OSQ8N7S6 290 aa1.51□□□□□ -2.17
SRP54-204ENST00000553923 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.51□□□□□ -2.17
SRP54-204ENST00000553923 TMEM75Q8N9X5 138 aa1.51□□□□□ -2.17
SRP54-204ENST00000553923 ZNF680Q8NEM1 530 aa1.51□□□□□ -2.17
SRP54-204ENST00000553923 OR2Z1Q8NG97 314 aa1.51□□□□□ -2.17
SRP54-204ENST00000553923 OR2T4Q8NH00 348 aa1.51□□□□□ -2.17
SRP54-204ENST00000553923 OR2V1Q8NHB1 315 aa1.51□□□□□ -2.17
SRP54-204ENST00000553923 MCFD2Q8NI22 146 aa1.51□□□□□ -2.17
SRP54-204ENST00000553923 RBPMSQ93062 196 aaKnown RBP1.51□□□□□ -2.17
SRP54-204ENST00000553923 RAD51AP1Q96B01 352 aa1.51□□□□□ -2.17
SRP54-204ENST00000553923 EXOSC8Q96B26 276 aaKnown RBP1.51□□□□□ -2.17
SRP54-204ENST00000553923 SLC25A44Q96H78 314 aaPredicted RBP1.51□□□□□ -2.17
SRP54-204ENST00000553923 ACY3Q96HD9 319 aa1.51□□□□□ -2.17
SRP54-204ENST00000553923 REEP6Q96HR9 211 aa1.51□□□□□ -2.17
SRP54-204ENST00000553923 SLC35G5Q96KT7 338 aa1.51□□□□□ -2.17
SRP54-204ENST00000553923 OR7D2Q96RA2 312 aa1.51□□□□□ -2.17
SRP54-204ENST00000553923 NIPSNAP1Q9BPW8 284 aa1.51□□□□□ -2.17
SRP54-204ENST00000553923 TBL1YQ9BQ87 522 aa1.51□□□□□ -2.17
SRP54-204ENST00000553923 ZNF649Q9BS31 505 aa1.51□□□□□ -2.17
SRP54-204ENST00000553923 DCSTAMPQ9H295 470 aa1.51□□□□□ -2.17
SRP54-204ENST00000553923 OR51I2Q9H344 312 aa1.51□□□□□ -2.17
SRP54-204ENST00000553923 ZNF430Q9H8G1 570 aaPredicted RBP1.51□□□□□ -2.17
SRP54-204ENST00000553923 C8orf17Q9NRJ1 99 aa1.51□□□□□ -2.17
SRP54-204ENST00000553923 CMTM6Q9NX76 183 aa1.51□□□□□ -2.17
SRP54-204ENST00000553923 C21orf62Q9NYP8 219 aa1.51□□□□□ -2.17
SRP54-204ENST00000553923 VPREB3Q9UKI3 123 aa1.51□□□□□ -2.17
SRP54-204ENST00000553923 ANGPT4Q9Y264 503 aa1.51□□□□□ -2.17
SRP54-204ENST00000553923 CCDC144AA2RUR9 1427 aa1.5□□□□□ -2.17
SRP54-204ENST00000553923 PTPRKQ15262 1439 aa1.5□□□□□ -2.17
SRP54-204ENST00000553923 TRBV6-6A0A0A6YYG2 114 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms