RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 PRR20CP86479 221 aa6.82□□□□□ -1.32
PRKCH-208ENST00000553846 PRR20DP86480 221 aa6.82□□□□□ -1.32
PRKCH-208ENST00000553846 PRR20BP86481 221 aa6.82□□□□□ -1.32
PRKCH-208ENST00000553846 PRR20AP86496 221 aa6.82□□□□□ -1.32
PRKCH-208ENST00000553846 ALKBH1Q13686 389 aaKnown RBP6.82□□□□□ -1.32
PRKCH-208ENST00000553846 TMEM30BQ3MIR4 351 aa6.82□□□□□ -1.32
PRKCH-208ENST00000553846 TP53I3Q53FA7 332 aa6.82□□□□□ -1.32
PRKCH-208ENST00000553846 AKIRIN2Q53H80 203 aa6.82□□□□□ -1.32
PRKCH-208ENST00000553846 ZNF691Q5VV52 312 aa6.82□□□□□ -1.32
PRKCH-208ENST00000553846 TMEM244Q5VVB8 128 aa6.82□□□□□ -1.32
PRKCH-208ENST00000553846 ZNF833PQ6ZTB9 187 aa6.82□□□□□ -1.32
PRKCH-208ENST00000553846 LAX1Q8IWV1 398 aa6.82□□□□□ -1.32
PRKCH-208ENST00000553846 DEFB125Q8N687 156 aa6.82□□□□□ -1.32
PRKCH-208ENST00000553846 TCEANCQ8N8B7 351 aa6.82□□□□□ -1.32
PRKCH-208ENST00000553846 CYYR1Q96J86 154 aa6.82□□□□□ -1.32
PRKCH-208ENST00000553846 NR1H4Q96RI1 486 aaPredicted RBP6.82□□□□□ -1.32
PRKCH-208ENST00000553846 ADI1Q9BV57 179 aa6.82□□□□□ -1.32
PRKCH-208ENST00000553846 NEK6Q9HC98 313 aa6.82□□□□□ -1.32
PRKCH-208ENST00000553846 FAM118AQ9NWS6 357 aa6.82□□□□□ -1.32
PRKCH-208ENST00000553846 MSGN1A6NI15 193 aa6.81□□□□□ -1.32
PRKCH-208ENST00000553846 J3QRE1 110 aa6.81□□□□□ -1.32
PRKCH-208ENST00000553846 SULT1B1O43704 296 aa6.81□□□□□ -1.32
PRKCH-208ENST00000553846 TRBV12-3P01733 135 aa6.81□□□□□ -1.32
PRKCH-208ENST00000553846 TMEM225BP0DP42 221 aa6.81□□□□□ -1.32
PRKCH-208ENST00000553846 ATF4P18848 351 aaPredicted RBP6.81□□□□□ -1.32
PRKCH-208ENST00000553846 DAPP51397 102 aa6.81□□□□□ -1.32
PRKCH-208ENST00000553846 CCR9P51686 369 aa6.81□□□□□ -1.32
PRKCH-208ENST00000553846 RBM11P57052 281 aaKnown RBP6.81□□□□□ -1.32
PRKCH-208ENST00000553846 SYNJ2BPP57105 145 aa6.81□□□□□ -1.32
PRKCH-208ENST00000553846 TPPP2P59282 170 aa6.81□□□□□ -1.32
PRKCH-208ENST00000553846 CD81P60033 236 aa6.81□□□□□ -1.32
PRKCH-208ENST00000553846 ADARB1P78563 741 aaKnown RBP6.81□□□□□ -1.32
PRKCH-208ENST00000553846 TNFRSF9Q07011 255 aa6.81□□□□□ -1.32
PRKCH-208ENST00000553846 PMS2P11Q13670 270 aa6.81□□□□□ -1.32
PRKCH-208ENST00000553846 TRIM25Q14258 630 aaKnown RBP6.81□□□□□ -1.32
PRKCH-208ENST00000553846 GNMTQ14749 295 aa6.81□□□□□ -1.32
PRKCH-208ENST00000553846 ACTBL2Q562R1 376 aa6.81□□□□□ -1.32
PRKCH-208ENST00000553846 DHFR2Q86XF0 187 aa6.81□□□□□ -1.32
PRKCH-208ENST00000553846 GID4Q8IVV7 300 aa6.81□□□□□ -1.32
PRKCH-208ENST00000553846 PARP16Q8N5Y8 322 aa6.81□□□□□ -1.32
PRKCH-208ENST00000553846 OR10V1Q8NGI7 309 aa6.81□□□□□ -1.32
PRKCH-208ENST00000553846 OR2K2Q8NGT1 345 aa6.81□□□□□ -1.32
PRKCH-208ENST00000553846 OR10K1Q8NGX5 313 aa6.81□□□□□ -1.32
PRKCH-208ENST00000553846 OR1L1Q8NH94 360 aa6.81□□□□□ -1.32
PRKCH-208ENST00000553846 DNAJC9Q8WXX5 260 aa6.81□□□□□ -1.32
PRKCH-208ENST00000553846 MS4A10Q96PG2 267 aa6.81□□□□□ -1.32
PRKCH-208ENST00000553846 NEURL2Q9BR09 285 aa6.81□□□□□ -1.32
PRKCH-208ENST00000553846 ZNF251Q9BRH9 671 aa6.81□□□□□ -1.32
PRKCH-208ENST00000553846 TEX12Q9BXU0 123 aa6.81□□□□□ -1.32
PRKCH-208ENST00000553846 SLA2Q9H6Q3 261 aa6.81□□□□□ -1.32
PRKCH-208ENST00000553846 RANGRFQ9HD47 186 aaPredicted RBP6.81□□□□□ -1.32
PRKCH-208ENST00000553846 ZC4H2Q9NQZ6 224 aa6.81□□□□□ -1.32
PRKCH-208ENST00000553846 IL36GQ9NZH8 169 aa6.81□□□□□ -1.32
PRKCH-208ENST00000553846 RCC2Q9P258 522 aaKnown RBP6.81□□□□□ -1.32
PRKCH-208ENST00000553846 WARS2Q9UGM6 360 aaKnown RBP6.81□□□□□ -1.32
PRKCH-208ENST00000553846 CXorf65A6NEN9 183 aa6.8□□□□□ -1.32
PRKCH-208ENST00000553846 RRHO14718 337 aa6.8□□□□□ -1.32
PRKCH-208ENST00000553846 RBMXL2O75526 392 aaKnown RBP6.8□□□□□ -1.32
PRKCH-208ENST00000553846 HBZP02008 142 aa6.8□□□□□ -1.32
PRKCH-208ENST00000553846 MED14OSP0DP75 135 aa6.8□□□□□ -1.32
PRKCH-208ENST00000553846 DYRK1AQ13627 763 aa6.8□□□□□ -1.32
PRKCH-208ENST00000553846 PPP1R27Q86WC6 154 aa6.8□□□□□ -1.32
PRKCH-208ENST00000553846 WFDC3Q8IUB2 231 aa6.8□□□□□ -1.32
PRKCH-208ENST00000553846 OR10H4Q8NGA5 316 aa6.8□□□□□ -1.32
PRKCH-208ENST00000553846 OR51A2Q8NGJ7 313 aa6.8□□□□□ -1.32
PRKCH-208ENST00000553846 OR13C3Q8NGS6 347 aa6.8□□□□□ -1.32
PRKCH-208ENST00000553846 CCDC107Q8WV48 283 aa6.8□□□□□ -1.32
PRKCH-208ENST00000553846 CANT1Q8WVQ1 401 aa6.8□□□□□ -1.32
PRKCH-208ENST00000553846 IL4I1Q96RQ9 567 aa6.8□□□□□ -1.32
PRKCH-208ENST00000553846 FAM103A1Q9BTL3 118 aaKnown RBP6.8□□□□□ -1.32
PRKCH-208ENST00000553846 FBXL15Q9H469 300 aa6.8□□□□□ -1.32
PRKCH-208ENST00000553846 SRD5A3Q9H8P0 318 aa6.8□□□□□ -1.32
PRKCH-208ENST00000553846 ZNF556Q9HAH1 456 aa6.8□□□□□ -1.32
PRKCH-208ENST00000553846 TAGLN3Q9UI15 199 aa6.8□□□□□ -1.32
PRKCH-208ENST00000553846 GNG8Q9UK08 70 aa6.8□□□□□ -1.32
PRKCH-208ENST00000553846 A3GALT2U3KPV4 340 aa6.8□□□□□ -1.32
PRKCH-208ENST00000553846 LRP1BQ9NZR2 4599 aa6.79□□□□□ -1.32
PRKCH-208ENST00000553846 A0A0J9YWU9 116 aa6.79□□□□□ -1.32
PRKCH-208ENST00000553846 H3BUA1 57 aa6.79□□□□□ -1.32
PRKCH-208ENST00000553846 GEMIN2O14893 280 aaKnown RBP6.79□□□□□ -1.32
PRKCH-208ENST00000553846 SNX3O60493 162 aa6.79□□□□□ -1.32
PRKCH-208ENST00000553846 MITFO75030 526 aaPredicted RBP6.79□□□□□ -1.32
PRKCH-208ENST00000553846 TPPPO94811 219 aa6.79□□□□□ -1.32
PRKCH-208ENST00000553846 OR2A4O95047 310 aa6.79□□□□□ -1.32
PRKCH-208ENST00000553846 CNIH1O95406 144 aa6.79□□□□□ -1.32
PRKCH-208ENST00000553846 TRGV3P03979 118 aa6.79□□□□□ -1.32
PRKCH-208ENST00000553846 TFAP2AP05549 437 aa6.79□□□□□ -1.32
PRKCH-208ENST00000553846 OR3A3P47888 321 aa6.79□□□□□ -1.32
PRKCH-208ENST00000553846 MOGAT2Q3SYC2 334 aa6.79□□□□□ -1.32
PRKCH-208ENST00000553846 CD300EQ496F6 205 aaPredicted RBP6.79□□□□□ -1.32
PRKCH-208ENST00000553846 MORN2Q502X0 79 aa6.79□□□□□ -1.32
PRKCH-208ENST00000553846 LY6G6FQ5SQ64 297 aa6.79□□□□□ -1.32
PRKCH-208ENST00000553846 LPCAT4Q643R3 524 aa6.79□□□□□ -1.32
PRKCH-208ENST00000553846 ZNF343Q6P1L6 599 aa6.79□□□□□ -1.32
PRKCH-208ENST00000553846 POC5Q8NA72 575 aa6.79□□□□□ -1.32
PRKCH-208ENST00000553846 LFNGQ8NES3 379 aa6.79□□□□□ -1.32
PRKCH-208ENST00000553846 RGP1Q92546 391 aaPredicted RBP6.79□□□□□ -1.32
PRKCH-208ENST00000553846 ASB9Q96DX5 294 aa6.79□□□□□ -1.32
PRKCH-208ENST00000553846 PELI1Q96FA3 418 aa6.79□□□□□ -1.32
PRKCH-208ENST00000553846 RDH12Q96NR8 316 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms