RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 PGA5P0DJD9 388 aa13.29□□□□□ -0.28
ACTN1-209ENST00000553659 PPIAL4FP0DN26 164 aa13.29□□□□□ -0.28
ACTN1-209ENST00000553659 MPV17P39210 176 aa13.29□□□□□ -0.28
ACTN1-209ENST00000553659 LCN2P80188 198 aa13.29□□□□□ -0.28
ACTN1-209ENST00000553659 FOXL1Q12952 345 aa13.29□□□□□ -0.28
ACTN1-209ENST00000553659 PRR31Q5SQ13 230 aa13.29□□□□□ -0.28
ACTN1-209ENST00000553659 HDHD3Q9BSH5 251 aaPredicted RBP13.29□□□□□ -0.28
ACTN1-209ENST00000553659 PDCD10Q9BUL8 212 aa13.29□□□□□ -0.28
ACTN1-209ENST00000553659 RAB18Q9NP72 206 aa13.29□□□□□ -0.28
ACTN1-209ENST00000553659 PLSCR3Q9NRY6 295 aa13.29□□□□□ -0.28
ACTN1-209ENST00000553659 DOCK11Q5JSL3 2073 aa13.28□□□□□ -0.28
ACTN1-209ENST00000553659 A0A1B0GWJ7 208 aa13.28□□□□□ -0.28
ACTN1-209ENST00000553659 OR5H14A6NHG9 310 aa13.28□□□□□ -0.28
ACTN1-209ENST00000553659 RFPL4AA6NLU0 287 aa13.28□□□□□ -0.28
ACTN1-209ENST00000553659 RFPL4AL1F8VTS6 287 aa13.28□□□□□ -0.28
ACTN1-209ENST00000553659 G3V3Q6 166 aa13.28□□□□□ -0.28
ACTN1-209ENST00000553659 SDCBPO00560 298 aaPredicted RBP13.28□□□□□ -0.28
ACTN1-209ENST00000553659 FOXH1O75593 365 aa13.28□□□□□ -0.28
ACTN1-209ENST00000553659 HKR1P10072 659 aa13.28□□□□□ -0.28
ACTN1-209ENST00000553659 H2BFSP57053 126 aa13.28□□□□□ -0.28
ACTN1-209ENST00000553659 ERVK11-1P61568 191 aa13.28□□□□□ -0.28
ACTN1-209ENST00000553659 TUSC1Q2TAM9 212 aa13.28□□□□□ -0.28
ACTN1-209ENST00000553659 ZNF660Q6AZW8 331 aaPredicted RBP13.28□□□□□ -0.28
ACTN1-209ENST00000553659 SHISA2Q6UWI4 295 aa13.28□□□□□ -0.28
ACTN1-209ENST00000553659 C17orf107Q6ZR85 190 aa13.28□□□□□ -0.28
ACTN1-209ENST00000553659 SGPP2Q8IWX5 399 aa13.28□□□□□ -0.28
ACTN1-209ENST00000553659 SLC38A6Q8IZM9 456 aa13.28□□□□□ -0.28
ACTN1-209ENST00000553659 FAM185AQ8N0U4 392 aa13.28□□□□□ -0.28
ACTN1-209ENST00000553659 POC1AQ8NBT0 407 aa13.28□□□□□ -0.28
ACTN1-209ENST00000553659 SCCPDHQ8NBX0 429 aa13.28□□□□□ -0.28
ACTN1-209ENST00000553659 ADAD2Q8NCV1 583 aaKnown RBP13.28□□□□□ -0.28
ACTN1-209ENST00000553659 OR11H4Q8NGC9 324 aa13.28□□□□□ -0.28
ACTN1-209ENST00000553659 NEK7Q8TDX7 302 aa13.28□□□□□ -0.28
ACTN1-209ENST00000553659 C22orf15Q8WYQ4 148 aa13.28□□□□□ -0.28
ACTN1-209ENST00000553659 MAFIPQ8WZ33 124 aa13.28□□□□□ -0.28
ACTN1-209ENST00000553659 NRIP2Q9BQI9 281 aa13.28□□□□□ -0.28
ACTN1-209ENST00000553659 RTBDNQ9BSG5 229 aaPredicted RBP13.28□□□□□ -0.28
ACTN1-209ENST00000553659 TLNRD1Q9H1K6 362 aa13.28□□□□□ -0.28
ACTN1-209ENST00000553659 FN3KRPQ9HA64 309 aa13.28□□□□□ -0.28
ACTN1-209ENST00000553659 ZDHHC8Q9ULC8 765 aa13.28□□□□□ -0.28
ACTN1-209ENST00000553659 BOLA1Q9Y3E2 137 aa13.28□□□□□ -0.28
ACTN1-209ENST00000553659 PPIAL4AQ9Y536 164 aa13.28□□□□□ -0.28
ACTN1-209ENST00000553659 ZSCAN5BA6NJL1 495 aa13.27□□□□□ -0.29
ACTN1-209ENST00000553659 DBX1A6NMT0 343 aa13.27□□□□□ -0.29
ACTN1-209ENST00000553659 DEGS1O15121 323 aa13.27□□□□□ -0.29
ACTN1-209ENST00000553659 TMPRSS2O15393 492 aa13.27□□□□□ -0.29
ACTN1-209ENST00000553659 ATP6V1G1O75348 118 aa13.27□□□□□ -0.29
ACTN1-209ENST00000553659 DIRAS3O95661 229 aa13.27□□□□□ -0.29
ACTN1-209ENST00000553659 ZNF728P0DKX0 622 aa13.27□□□□□ -0.29
ACTN1-209ENST00000553659 NFYAP23511 347 aaPredicted RBP13.27□□□□□ -0.29
ACTN1-209ENST00000553659 ZFP36P26651 326 aaKnown RBP13.27□□□□□ -0.29
ACTN1-209ENST00000553659 HERV-K104P61576 105 aa13.27□□□□□ -0.29
ACTN1-209ENST00000553659 ZNF146Q15072 292 aa13.27□□□□□ -0.29
ACTN1-209ENST00000553659 GSG1LQ6UXU4 331 aa13.27□□□□□ -0.29
ACTN1-209ENST00000553659 RBMS3Q6XE24 437 aaKnown RBP13.27□□□□□ -0.29
ACTN1-209ENST00000553659 CCDC71LQ8N9Z2 235 aa13.27□□□□□ -0.29
ACTN1-209ENST00000553659 SUMF2Q8NBJ7 301 aa13.27□□□□□ -0.29
ACTN1-209ENST00000553659 DIRC2Q96SL1 478 aa13.27□□□□□ -0.29
ACTN1-209ENST00000553659 Q9N2K0 584 aa13.27□□□□□ -0.29
ACTN1-209ENST00000553659 C1orf123Q9NWV4 160 aa13.27□□□□□ -0.29
ACTN1-209ENST00000553659 KCNIP3Q9Y2W7 256 aa13.27□□□□□ -0.29
ACTN1-209ENST00000553659 IGKV1D-8A0A087WSZ0 117 aa13.26□□□□□ -0.29
ACTN1-209ENST00000553659 PIGBOS1A0A0B4J2F0 54 aa13.26□□□□□ -0.29
ACTN1-209ENST00000553659 TRDCB7Z8K6 153 aa13.26□□□□□ -0.29
ACTN1-209ENST00000553659 L7N2F9 121 aa13.26□□□□□ -0.29
ACTN1-209ENST00000553659 SH2D1BO14796 132 aa13.26□□□□□ -0.29
ACTN1-209ENST00000553659 TK1P04183 234 aa13.26□□□□□ -0.29
ACTN1-209ENST00000553659 CD55P08174 381 aa13.26□□□□□ -0.29
ACTN1-209ENST00000553659 SLC25A4P12235 298 aa13.26□□□□□ -0.29
ACTN1-209ENST00000553659 RBMXP38159 391 aaKnown RBP13.26□□□□□ -0.29
ACTN1-209ENST00000553659 KCNJ3P48549 501 aa13.26□□□□□ -0.29
ACTN1-209ENST00000553659 ZNF154Q13106 437 aa13.26□□□□□ -0.29
ACTN1-209ENST00000553659 LGALSLQ3ZCW2 172 aaPredicted RBP13.26□□□□□ -0.29
ACTN1-209ENST00000553659 LY6G6FQ5SQ64 297 aa13.26□□□□□ -0.29
ACTN1-209ENST00000553659 TMEM65Q6PI78 240 aa13.26□□□□□ -0.29
ACTN1-209ENST00000553659 SIGLECL1Q8N7X8 197 aa13.26□□□□□ -0.29
ACTN1-209ENST00000553659 CASTOR1Q8WTX7 329 aa13.26□□□□□ -0.29
ACTN1-209ENST00000553659 TMEM230Q96A57 120 aa13.26□□□□□ -0.29
ACTN1-209ENST00000553659 MOB3AQ96BX8 217 aa13.26□□□□□ -0.29
ACTN1-209ENST00000553659 DPCDQ9BVM2 203 aaPredicted RBP13.26□□□□□ -0.29
ACTN1-209ENST00000553659 NMES1Q9C002 83 aa13.26□□□□□ -0.29
ACTN1-209ENST00000553659 SLC23A1Q9UHI7 598 aa13.26□□□□□ -0.29
ACTN1-209ENST00000553659 NUP50Q9UKX7 468 aa13.26□□□□□ -0.29
ACTN1-209ENST00000553659 POLR3KQ9Y2Y1 108 aaPredicted RBP13.26□□□□□ -0.29
ACTN1-209ENST00000553659 NXPH2O95156 264 aa13.25□□□□□ -0.29
ACTN1-209ENST00000553659 SIX6O95475 246 aa13.25□□□□□ -0.29
ACTN1-209ENST00000553659 IGHV2-70P01814 119 aa13.25□□□□□ -0.29
ACTN1-209ENST00000553659 ZNF44P15621 663 aa13.25□□□□□ -0.29
ACTN1-209ENST00000553659 RPA2P15927 270 aa13.25□□□□□ -0.29
ACTN1-209ENST00000553659 PRTN3P24158 256 aa13.25□□□□□ -0.29
ACTN1-209ENST00000553659 CD200P41217 278 aa13.25□□□□□ -0.29
ACTN1-209ENST00000553659 C2orf68Q2NKX9 166 aa13.25□□□□□ -0.29
ACTN1-209ENST00000553659 ABCA11PQ4W5N1 156 aa13.25□□□□□ -0.29
ACTN1-209ENST00000553659 SPRNQ5BIV9 151 aa13.25□□□□□ -0.29
ACTN1-209ENST00000553659 ZNF880Q6PDB4 577 aa13.25□□□□□ -0.29
ACTN1-209ENST00000553659 DEFB108BQ8NET1 73 aa13.25□□□□□ -0.29
ACTN1-209ENST00000553659 FAM210AQ96ND0 272 aa13.25□□□□□ -0.29
ACTN1-209ENST00000553659 HES4Q9HCC6 221 aa13.25□□□□□ -0.29
ACTN1-209ENST00000553659 MSL2Q9HCI7 577 aa13.25□□□□□ -0.29
ACTN1-209ENST00000553659 MMP26Q9NRE1 261 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms