RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 ACACBO00763 2458 aa10.94□□□□□ -0.66
SHMT2-205ENST00000553474 DMXL2Q8TDJ6 3036 aa10.94□□□□□ -0.66
SHMT2-205ENST00000553474 AQP7O14520 342 aa10.94□□□□□ -0.66
SHMT2-205ENST00000553474 RHBDL1O75783 438 aa10.94□□□□□ -0.66
SHMT2-205ENST00000553474 OR2H2O95918 312 aa10.94□□□□□ -0.66
SHMT2-205ENST00000553474 IGHV1-2P23083 117 aa10.94□□□□□ -0.66
SHMT2-205ENST00000553474 ATP6V0CP27449 155 aa10.94□□□□□ -0.66
SHMT2-205ENST00000553474 HOXC12P31275 282 aa10.94□□□□□ -0.66
SHMT2-205ENST00000553474 PPT1P50897 306 aa10.94□□□□□ -0.66
SHMT2-205ENST00000553474 TAS2R30P59541 319 aa10.94□□□□□ -0.66
SHMT2-205ENST00000553474 RAB2AP61019 212 aa10.94□□□□□ -0.66
SHMT2-205ENST00000553474 DEFB109BQ30KR1 87 aa10.94□□□□□ -0.66
SHMT2-205ENST00000553474 AVPI1Q5T686 147 aa10.94□□□□□ -0.66
SHMT2-205ENST00000553474 CLEC9AQ6UXN8 241 aa10.94□□□□□ -0.66
SHMT2-205ENST00000553474 C17orf78Q8N4C9 275 aa10.94□□□□□ -0.66
SHMT2-205ENST00000553474 ZNF488Q96MN9 340 aa10.94□□□□□ -0.66
SHMT2-205ENST00000553474 ATP5SQ99766 215 aa10.94□□□□□ -0.66
SHMT2-205ENST00000553474 OR2J1Q9GZK6 312 aa10.94□□□□□ -0.66
SHMT2-205ENST00000553474 HES4Q9HCC6 221 aa10.94□□□□□ -0.66
SHMT2-205ENST00000553474 MAP1BP46821 2468 aaKnown RBP10.94□□□□□ -0.66
SHMT2-205ENST00000553474 FAM90A26D6RGX4 464 aa10.93□□□□□ -0.66
SHMT2-205ENST00000553474 CHST1O43916 411 aa10.93□□□□□ -0.66
SHMT2-205ENST00000553474 NXPH2O95156 264 aa10.93□□□□□ -0.66
SHMT2-205ENST00000553474 IGKV3-15P01624 115 aa10.93□□□□□ -0.66
SHMT2-205ENST00000553474 HBE1P02100 147 aa10.93□□□□□ -0.66
SHMT2-205ENST00000553474 CBR1P16152 277 aa10.93□□□□□ -0.66
SHMT2-205ENST00000553474 COX5AP20674 150 aa10.93□□□□□ -0.66
SHMT2-205ENST00000553474 ZNF154Q13106 437 aa10.93□□□□□ -0.66
SHMT2-205ENST00000553474 RHEBQ15382 184 aa10.93□□□□□ -0.66
SHMT2-205ENST00000553474 RNF212Q495C1 297 aa10.93□□□□□ -0.66
SHMT2-205ENST00000553474 TMEM182Q6ZP80 229 aaPredicted RBP10.93□□□□□ -0.66
SHMT2-205ENST00000553474 OR1J1Q8NGS3 322 aa10.93□□□□□ -0.66
SHMT2-205ENST00000553474 EGLN1Q9GZT9 426 aa10.93□□□□□ -0.66
SHMT2-205ENST00000553474 SH3BGRL3Q9H299 93 aa10.93□□□□□ -0.66
SHMT2-205ENST00000553474 OBP2BQ9NPH6 170 aa10.93□□□□□ -0.66
SHMT2-205ENST00000553474 KCNJ16Q9NPI9 418 aa10.93□□□□□ -0.66
SHMT2-205ENST00000553474 TRAPPC2LQ9UL33 140 aa10.93□□□□□ -0.66
SHMT2-205ENST00000553474 RNF150Q9ULK6 438 aa10.93□□□□□ -0.66
SHMT2-205ENST00000553474 TRAV17A0A0B4J275 112 aa10.93□□□□□ -0.66
SHMT2-205ENST00000553474 C9JQL5 133 aa10.93□□□□□ -0.66
SHMT2-205ENST00000553474 F12P00748 615 aaPredicted RBP10.93□□□□□ -0.66
SHMT2-205ENST00000553474 S100A6P06703 90 aa10.93□□□□□ -0.66
SHMT2-205ENST00000553474 SULT1A1P50225 295 aa10.93□□□□□ -0.66
SHMT2-205ENST00000553474 RAB13P51153 203 aa10.93□□□□□ -0.66
SHMT2-205ENST00000553474 TLE4Q04727 773 aa10.93□□□□□ -0.66
SHMT2-205ENST00000553474 TESK1Q15569 626 aa10.93□□□□□ -0.66
SHMT2-205ENST00000553474 WDR86Q86TI4 376 aa10.93□□□□□ -0.66
SHMT2-205ENST00000553474 TCTEX1D1Q8N7M0 179 aa10.93□□□□□ -0.66
SHMT2-205ENST00000553474 FAM213BQ8TBF2 198 aa10.93□□□□□ -0.66
SHMT2-205ENST00000553474 TMEM171Q8WVE6 324 aa10.93□□□□□ -0.66
SHMT2-205ENST00000553474 WNT2BQ93097 391 aa10.93□□□□□ -0.66
SHMT2-205ENST00000553474 SARAFQ96BY9 339 aa10.93□□□□□ -0.66
SHMT2-205ENST00000553474 RBMXL1Q96E39 390 aaKnown RBP10.93□□□□□ -0.66
SHMT2-205ENST00000553474 TOLLIPQ9H0E2 274 aa10.93□□□□□ -0.66
SHMT2-205ENST00000553474 COA4Q9NYJ1 87 aa10.93□□□□□ -0.66
SHMT2-205ENST00000553474 KIAA1456Q9P272 454 aa10.93□□□□□ -0.66
SHMT2-205ENST00000553474 TXNL1O43396 289 aa10.92□□□□□ -0.66
SHMT2-205ENST00000553474 IDH3GP51553 393 aaPredicted RBP10.92□□□□□ -0.66
SHMT2-205ENST00000553474 DYNLT3P51808 116 aa10.92□□□□□ -0.66
SHMT2-205ENST00000553474 TMPRSS3P57727 454 aa10.92□□□□□ -0.66
SHMT2-205ENST00000553474 MZT1Q08AG7 82 aa10.92□□□□□ -0.66
SHMT2-205ENST00000553474 CLINT1Q14677 625 aa10.92□□□□□ -0.66
SHMT2-205ENST00000553474 SPATA46Q5T0L3 261 aa10.92□□□□□ -0.66
SHMT2-205ENST00000553474 RNASE11Q8TAA1 199 aaKnown RBP10.92□□□□□ -0.66
SHMT2-205ENST00000553474 PRR7Q8TB68 274 aa10.92□□□□□ -0.66
SHMT2-205ENST00000553474 SLC25A40Q8TBP6 338 aa10.92□□□□□ -0.66
SHMT2-205ENST00000553474 FAM216AQ8WUB2 273 aa10.92□□□□□ -0.66
SHMT2-205ENST00000553474 GPR146Q96CH1 333 aa10.92□□□□□ -0.66
SHMT2-205ENST00000553474 OR51B6Q9H340 312 aa10.92□□□□□ -0.66
SHMT2-205ENST00000553474 BIN3Q9NQY0 253 aa10.92□□□□□ -0.66
SHMT2-205ENST00000553474 KCNIP1Q9NZI2 227 aa10.92□□□□□ -0.66
SHMT2-205ENST00000553474 TMEM30CPA0ZSE6 113 aa10.91□□□□□ -0.66
SHMT2-205ENST00000553474 KIAA1324LA8MWY0 1029 aaPredicted RBP10.91□□□□□ -0.66
SHMT2-205ENST00000553474 CDIPTO14735 213 aa10.91□□□□□ -0.66
SHMT2-205ENST00000553474 TNFSF12O43508 249 aa10.91□□□□□ -0.66
SHMT2-205ENST00000553474 TMEM50AO95807 157 aa10.91□□□□□ -0.66
SHMT2-205ENST00000553474 IFNA5P01569 189 aa10.91□□□□□ -0.66
SHMT2-205ENST00000553474 OR8U8P0C7N1 319 aa10.91□□□□□ -0.66
SHMT2-205ENST00000553474 PSG2P11465 335 aa10.91□□□□□ -0.66
SHMT2-205ENST00000553474 FHITP49789 147 aa10.91□□□□□ -0.66
SHMT2-205ENST00000553474 PAX9P55771 341 aa10.91□□□□□ -0.66
SHMT2-205ENST00000553474 PSG7Q13046 419 aa10.91□□□□□ -0.66
SHMT2-205ENST00000553474 ACSF3Q4G176 576 aaPredicted RBP10.91□□□□□ -0.66
SHMT2-205ENST00000553474 AKR1C8PQ5T2L2 129 aa10.91□□□□□ -0.66
SHMT2-205ENST00000553474 SLC35E4Q6ICL7 350 aa10.91□□□□□ -0.66
SHMT2-205ENST00000553474 FAM169BQ8N8A8 192 aa10.91□□□□□ -0.66
SHMT2-205ENST00000553474 OR51H1Q8NH63 302 aa10.91□□□□□ -0.66
SHMT2-205ENST00000553474 IL1F10Q8WWZ1 152 aa10.91□□□□□ -0.66
SHMT2-205ENST00000553474 PARD6GQ9BYG4 376 aaPredicted RBP10.91□□□□□ -0.66
SHMT2-205ENST00000553474 BCL2L14Q9BZR8 327 aa10.91□□□□□ -0.66
SHMT2-205ENST00000553474 PARP12Q9H0J9 701 aaKnown RBP10.91□□□□□ -0.66
SHMT2-205ENST00000553474 MAGT1Q9H0U3 335 aa10.91□□□□□ -0.66
SHMT2-205ENST00000553474 TRAV1-1A0A0B4J248 108 aa10.9□□□□□ -0.66
SHMT2-205ENST00000553474 A0A1W2PR80 420 aa10.9□□□□□ -0.66
SHMT2-205ENST00000553474 TMEM8BA6NDV4 472 aa10.9□□□□□ -0.66
SHMT2-205ENST00000553474 COLCA2A8K830 154 aa10.9□□□□□ -0.66
SHMT2-205ENST00000553474 IFNL4K9M1U5 179 aa10.9□□□□□ -0.66
SHMT2-205ENST00000553474 SIRPB1O00241 398 aa10.9□□□□□ -0.66
SHMT2-205ENST00000553474 SYNGR2O43760 224 aa10.9□□□□□ -0.66
SHMT2-205ENST00000553474 HAND1O96004 215 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms