RNA–Protein interactions for RNA: ENST00000553426.1

LINC00643-202, long intergenic non-protein coding RNA 643, humanhuman

TSL 3 BASIC

Gene LINC00643, Length 526 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-202ENST00000553426 RGS11O94810 467 aa10.04□□□□□ -0.8
LINC00643-202ENST00000553426 ELANEP08246 267 aa10.04□□□□□ -0.8
LINC00643-202ENST00000553426 UBBP0CG47 229 aa10.04□□□□□ -0.8
LINC00643-202ENST00000553426 OR5H8P0DN80 308 aa10.04□□□□□ -0.8
LINC00643-202ENST00000553426 ZNF137PP52743 207 aa10.04□□□□□ -0.8
LINC00643-202ENST00000553426 RAB25P57735 213 aa10.04□□□□□ -0.8
LINC00643-202ENST00000553426 FOXE3Q13461 319 aa10.04□□□□□ -0.8
LINC00643-202ENST00000553426 RCN1Q15293 331 aa10.04□□□□□ -0.8
LINC00643-202ENST00000553426 VAX1Q5SQQ9 334 aa10.04□□□□□ -0.8
LINC00643-202ENST00000553426 ETV3LQ6ZN32 361 aa10.04□□□□□ -0.8
LINC00643-202ENST00000553426 AHSA2Q719I0 299 aa10.04□□□□□ -0.8
LINC00643-202ENST00000553426 GAPTQ8N292 157 aa10.04□□□□□ -0.8
LINC00643-202ENST00000553426 Q8N9W7 124 aa10.04□□□□□ -0.8
LINC00643-202ENST00000553426 ZNF439Q8NDP4 499 aa10.04□□□□□ -0.8
LINC00643-202ENST00000553426 TMEM104Q8NE00 496 aa10.04□□□□□ -0.8
LINC00643-202ENST00000553426 BPIFB6Q8NFQ5 453 aa10.04□□□□□ -0.8
LINC00643-202ENST00000553426 OR8U1Q8NH10 309 aa10.04□□□□□ -0.8
LINC00643-202ENST00000553426 OR1L1Q8NH94 360 aa10.04□□□□□ -0.8
LINC00643-202ENST00000553426 TFAP2CQ92754 450 aa10.04□□□□□ -0.8
LINC00643-202ENST00000553426 Q96M66 194 aa10.04□□□□□ -0.8
LINC00643-202ENST00000553426 NEDD4LQ96PU5 975 aa10.04□□□□□ -0.8
LINC00643-202ENST00000553426 P2RX4Q99571 388 aa10.04□□□□□ -0.8
LINC00643-202ENST00000553426 TAF9BQ9HBM6 251 aa10.04□□□□□ -0.8
LINC00643-202ENST00000553426 PSORS1C1Q9UIG5 152 aa10.04□□□□□ -0.8
LINC00643-202ENST00000553426 LRRC42Q9Y546 428 aa10.04□□□□□ -0.8
LINC00643-202ENST00000553426 WI2-2373I1.2A0A1W2PRP0 233 aa10.03□□□□□ -0.8
LINC00643-202ENST00000553426 LINC01548A6NM66 108 aa10.03□□□□□ -0.8
LINC00643-202ENST00000553426 CCL24O00175 119 aa10.03□□□□□ -0.8
LINC00643-202ENST00000553426 SLC31A2O15432 143 aa10.03□□□□□ -0.8
LINC00643-202ENST00000553426 LANCL1O43813 399 aa10.03□□□□□ -0.8
LINC00643-202ENST00000553426 PDCD6O75340 191 aa10.03□□□□□ -0.8
LINC00643-202ENST00000553426 SC5DO75845 299 aa10.03□□□□□ -0.8
LINC00643-202ENST00000553426 RPLP1P05386 114 aaKnown RBP10.03□□□□□ -0.8
LINC00643-202ENST00000553426 RCC1P18754 421 aaPredicted RBP10.03□□□□□ -0.8
LINC00643-202ENST00000553426 ZNF134P52741 427 aa10.03□□□□□ -0.8
LINC00643-202ENST00000553426 CD69Q07108 199 aa10.03□□□□□ -0.8
LINC00643-202ENST00000553426 CT45A1Q5HYN5 189 aa10.03□□□□□ -0.8
LINC00643-202ENST00000553426 NKAPLQ5M9Q1 402 aa10.03□□□□□ -0.8
LINC00643-202ENST00000553426 GLT8D1Q68CQ7 371 aa10.03□□□□□ -0.8
LINC00643-202ENST00000553426 C18orf65Q6ZTR6 163 aa10.03□□□□□ -0.8
LINC00643-202ENST00000553426 MS4A15Q8N5U1 240 aa10.03□□□□□ -0.8
LINC00643-202ENST00000553426 CT45A3Q8NHU0 189 aa10.03□□□□□ -0.8
LINC00643-202ENST00000553426 FAM46BQ96A09 425 aa10.03□□□□□ -0.8
LINC00643-202ENST00000553426 GALMQ96C23 342 aa10.03□□□□□ -0.8
LINC00643-202ENST00000553426 CHCHD6Q9BRQ6 235 aa10.03□□□□□ -0.8
LINC00643-202ENST00000553426 ABHD14AQ9BUJ0 271 aa10.03□□□□□ -0.8
LINC00643-202ENST00000553426 DCLRE1BQ9H816 532 aa10.03□□□□□ -0.8
LINC00643-202ENST00000553426 PLSCR3Q9NRY6 295 aa10.03□□□□□ -0.8
LINC00643-202ENST00000553426 PLCXD1Q9NUJ7 323 aa10.03□□□□□ -0.8
LINC00643-202ENST00000553426 ABRACLQ9P1F3 81 aa10.03□□□□□ -0.8
LINC00643-202ENST00000553426 JPT1Q9UK76 154 aa10.03□□□□□ -0.8
LINC00643-202ENST00000553426 ZNF736B4DX44 427 aaPredicted RBP10.02□□□□□ -0.81
LINC00643-202ENST00000553426 H0YHG0 523 aa10.02□□□□□ -0.81
LINC00643-202ENST00000553426 RAMP3O60896 148 aa10.02□□□□□ -0.81
LINC00643-202ENST00000553426 GNAO1P09471 354 aa10.02□□□□□ -0.81
LINC00643-202ENST00000553426 VHLP40337 213 aa10.02□□□□□ -0.81
LINC00643-202ENST00000553426 CDX1P47902 265 aaPredicted RBP10.02□□□□□ -0.81
LINC00643-202ENST00000553426 F2RL1P55085 397 aa10.02□□□□□ -0.81
LINC00643-202ENST00000553426 DGCR2P98153 550 aa10.02□□□□□ -0.81
LINC00643-202ENST00000553426 MMDQ15546 238 aa10.02□□□□□ -0.81
LINC00643-202ENST00000553426 MORN2Q502X0 79 aa10.02□□□□□ -0.81
LINC00643-202ENST00000553426 FAM53AQ6NSI3 398 aaPredicted RBP10.02□□□□□ -0.81
LINC00643-202ENST00000553426 TMEM65Q6PI78 240 aa10.02□□□□□ -0.81
LINC00643-202ENST00000553426 LCNL1Q6ZST4 164 aa10.02□□□□□ -0.81
LINC00643-202ENST00000553426 FAM71E2Q8N5Q1 922 aa10.02□□□□□ -0.81
LINC00643-202ENST00000553426 NANOGP1Q8N7R0 232 aa10.02□□□□□ -0.81
LINC00643-202ENST00000553426 OR2AK2Q8NG84 335 aa10.02□□□□□ -0.81
LINC00643-202ENST00000553426 OR5M8Q8NGP6 311 aa10.02□□□□□ -0.81
LINC00643-202ENST00000553426 ZNF251Q9BRH9 671 aa10.02□□□□□ -0.81
LINC00643-202ENST00000553426 MND1Q9BWT6 205 aa10.02□□□□□ -0.81
LINC00643-202ENST00000553426 MBNL3Q9NUK0 354 aaKnown RBP10.02□□□□□ -0.81
LINC00643-202ENST00000553426 ZNF107Q9UII5 783 aaPredicted RBP10.02□□□□□ -0.81
LINC00643-202ENST00000553426 YPEL1O60688 119 aa10.01□□□□□ -0.81
LINC00643-202ENST00000553426 MYF6P23409 242 aa10.01□□□□□ -0.81
LINC00643-202ENST00000553426 HTD2P86397 168 aa10.01□□□□□ -0.81
LINC00643-202ENST00000553426 GABPB1Q06547 395 aaPredicted RBP10.01□□□□□ -0.81
LINC00643-202ENST00000553426 LSAMPQ13449 338 aa10.01□□□□□ -0.81
LINC00643-202ENST00000553426 KIR2DS1Q14954 304 aa10.01□□□□□ -0.81
LINC00643-202ENST00000553426 ACSM3Q53FZ2 586 aa10.01□□□□□ -0.81
LINC00643-202ENST00000553426 RBM48Q5RL73 367 aaKnown RBP10.01□□□□□ -0.81
LINC00643-202ENST00000553426 RNF152Q8N8N0 203 aa10.01□□□□□ -0.81
LINC00643-202ENST00000553426 OR52L2PQ8NGH6 319 aa10.01□□□□□ -0.81
LINC00643-202ENST00000553426 KCNG3Q8TAE7 436 aa10.01□□□□□ -0.81
LINC00643-202ENST00000553426 MRPL30Q8TCC3 161 aaKnown RBP10.01□□□□□ -0.81
LINC00643-202ENST00000553426 PHYHIPQ92561 330 aa10.01□□□□□ -0.81
LINC00643-202ENST00000553426 RAX2Q96IS3 184 aa10.01□□□□□ -0.81
LINC00643-202ENST00000553426 DUX3Q96PT4 197 aa10.01□□□□□ -0.81
LINC00643-202ENST00000553426 YPEL2Q96QA6 119 aa10.01□□□□□ -0.81
LINC00643-202ENST00000553426 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.01□□□□□ -0.81
LINC00643-202ENST00000553426 STEAP1Q9UHE8 339 aa10.01□□□□□ -0.81
LINC00643-202ENST00000553426 ZNF580Q9UK33 172 aa10.01□□□□□ -0.81
LINC00643-202ENST00000553426 IGHG4P01861 327 aa10□□□□□ -0.81
LINC00643-202ENST00000553426 IGF1P05019 195 aa10□□□□□ -0.81
LINC00643-202ENST00000553426 SLC2A2P11168 524 aaPredicted RBP10□□□□□ -0.81
LINC00643-202ENST00000553426 PPP1CCP36873 323 aaKnown RBP10□□□□□ -0.81
LINC00643-202ENST00000553426 ACTBP60709 375 aa10□□□□□ -0.81
LINC00643-202ENST00000553426 C9orf66Q5T8R8 295 aa10□□□□□ -0.81
LINC00643-202ENST00000553426 OGFRL1Q5TC84 451 aaPredicted RBP10□□□□□ -0.81
LINC00643-202ENST00000553426 SIGIRRQ6IA17 410 aa10□□□□□ -0.81
LINC00643-202ENST00000553426 LYPD6Q86Y78 171 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms