RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 C6orf183Q5T699 404 aa12.6□□□□□ -0.39
CDK4-215ENST00000553237 KPRPQ5T749 579 aaPredicted RBP12.6□□□□□ -0.39
CDK4-215ENST00000553237 OR10K2Q6IF99 312 aa12.6□□□□□ -0.39
CDK4-215ENST00000553237 C5orf24Q7Z6I8 188 aa12.6□□□□□ -0.39
CDK4-215ENST00000553237 ZNF329Q86UD4 541 aa12.6□□□□□ -0.39
CDK4-215ENST00000553237 LINC00311Q8N616 119 aa12.6□□□□□ -0.39
CDK4-215ENST00000553237 RBMXL1Q96E39 390 aaKnown RBP12.6□□□□□ -0.39
CDK4-215ENST00000553237 NOL4LQ96MY1 436 aaPredicted RBP12.6□□□□□ -0.39
CDK4-215ENST00000553237 GHRLQ9UBU3 117 aa12.6□□□□□ -0.39
CDK4-215ENST00000553237 LINC00527Q9UJ94 153 aa12.6□□□□□ -0.39
CDK4-215ENST00000553237 PSMB11A5LHX3 300 aa12.59□□□□□ -0.39
CDK4-215ENST00000553237 FAM90A10PA6NDY2 464 aa12.59□□□□□ -0.39
CDK4-215ENST00000553237 FAM90A7PA6NKC0 464 aa12.59□□□□□ -0.39
CDK4-215ENST00000553237 FAM90A23PA8MXZ1 464 aa12.59□□□□□ -0.39
CDK4-215ENST00000553237 MPIG6BO95866 241 aa12.59□□□□□ -0.39
CDK4-215ENST00000553237 UBBP0CG47 229 aa12.59□□□□□ -0.39
CDK4-215ENST00000553237 CD33P20138 364 aa12.59□□□□□ -0.39
CDK4-215ENST00000553237 IL3RAP26951 378 aa12.59□□□□□ -0.39
CDK4-215ENST00000553237 CALRP27797 417 aaKnown RBP12.59□□□□□ -0.39
CDK4-215ENST00000553237 ZNF134P52741 427 aa12.59□□□□□ -0.39
CDK4-215ENST00000553237 NKAPLQ5M9Q1 402 aa12.59□□□□□ -0.39
CDK4-215ENST00000553237 UBE2UQ5VVX9 321 aa12.59□□□□□ -0.39
CDK4-215ENST00000553237 ST6GALNAC6Q969X2 333 aa12.59□□□□□ -0.39
CDK4-215ENST00000553237 EAF1Q96JC9 268 aaPredicted RBP12.59□□□□□ -0.39
CDK4-215ENST00000553237 AK6Q9Y3D8 172 aaKnown RBP12.59□□□□□ -0.39
CDK4-215ENST00000553237 NCBP2LA6PVI3 153 aaKnown RBP12.58□□□□□ -0.4
CDK4-215ENST00000553237 SERPINE3A8MV23 424 aa12.58□□□□□ -0.4
CDK4-215ENST00000553237 ZNF736B4DX44 427 aaPredicted RBP12.58□□□□□ -0.4
CDK4-215ENST00000553237 SLC22A1O15245 554 aa12.58□□□□□ -0.4
CDK4-215ENST00000553237 FGF16O43320 207 aa12.58□□□□□ -0.4
CDK4-215ENST00000553237 PDCD6O75340 191 aa12.58□□□□□ -0.4
CDK4-215ENST00000553237 PF4P02776 101 aa12.58□□□□□ -0.4
CDK4-215ENST00000553237 CD37P11049 281 aa12.58□□□□□ -0.4
CDK4-215ENST00000553237 PSMB9P28065 219 aa12.58□□□□□ -0.4
CDK4-215ENST00000553237 HTR2CP28335 458 aa12.58□□□□□ -0.4
CDK4-215ENST00000553237 EBI3Q14213 229 aa12.58□□□□□ -0.4
CDK4-215ENST00000553237 CT45A1Q5HYN5 189 aa12.58□□□□□ -0.4
CDK4-215ENST00000553237 ZNF773Q6PK81 442 aa12.58□□□□□ -0.4
CDK4-215ENST00000553237 GAPTQ8N292 157 aa12.58□□□□□ -0.4
CDK4-215ENST00000553237 C8orf31Q8N9H6 132 aa12.58□□□□□ -0.4
CDK4-215ENST00000553237 CT45A3Q8NHU0 189 aa12.58□□□□□ -0.4
CDK4-215ENST00000553237 RTN4IP1Q8WWV3 396 aaPredicted RBP12.58□□□□□ -0.4
CDK4-215ENST00000553237 GFI1Q99684 422 aa12.58□□□□□ -0.4
CDK4-215ENST00000553237 CST11Q9H112 138 aa12.58□□□□□ -0.4
CDK4-215ENST00000553237 TAF9BQ9HBM6 251 aa12.58□□□□□ -0.4
CDK4-215ENST00000553237 NDUFB11Q9NX14 153 aa12.58□□□□□ -0.4
CDK4-215ENST00000553237 LINC01548A6NM66 108 aa12.57□□□□□ -0.4
CDK4-215ENST00000553237 CA11O75493 328 aa12.57□□□□□ -0.4
CDK4-215ENST00000553237 GLAP06280 429 aa12.57□□□□□ -0.4
CDK4-215ENST00000553237 VSIG8P0DPA2 414 aa12.57□□□□□ -0.4
CDK4-215ENST00000553237 IGLL1P15814 213 aa12.57□□□□□ -0.4
CDK4-215ENST00000553237 Q3ZCU0 254 aa12.57□□□□□ -0.4
CDK4-215ENST00000553237 SLC25A48Q6ZT89 311 aaKnown RBP12.57□□□□□ -0.4
CDK4-215ENST00000553237 SLC35E3Q7Z769 313 aa12.57□□□□□ -0.4
CDK4-215ENST00000553237 ZNF439Q8NDP4 499 aa12.57□□□□□ -0.4
CDK4-215ENST00000553237 WFDC9Q8NEX5 89 aa12.57□□□□□ -0.4
CDK4-215ENST00000553237 OR52L2PQ8NGH6 319 aa12.57□□□□□ -0.4
CDK4-215ENST00000553237 OR6M1Q8NGM8 313 aa12.57□□□□□ -0.4
CDK4-215ENST00000553237 OR2T10Q8NGZ9 312 aa12.57□□□□□ -0.4
CDK4-215ENST00000553237 MRPL30Q8TCC3 161 aaKnown RBP12.57□□□□□ -0.4
CDK4-215ENST00000553237 FCGR1BQ92637 280 aa12.57□□□□□ -0.4
CDK4-215ENST00000553237 PHF21AQ96BD5 680 aa12.57□□□□□ -0.4
CDK4-215ENST00000553237 KCNK15Q9H427 330 aa12.57□□□□□ -0.4
CDK4-215ENST00000553237 PLGRKTQ9HBL7 147 aa12.57□□□□□ -0.4
CDK4-215ENST00000553237 RAB9BQ9NP90 201 aa12.57□□□□□ -0.4
CDK4-215ENST00000553237 OR2S2Q9NQN1 319 aa12.57□□□□□ -0.4
CDK4-215ENST00000553237 KCNIP1Q9NZI2 227 aa12.57□□□□□ -0.4
CDK4-215ENST00000553237 GNMTQ14749 295 aa12.56□□□□□ -0.4
CDK4-215ENST00000553237 P2RY14Q15391 338 aa12.56□□□□□ -0.4
CDK4-215ENST00000553237 TRAT1Q6PIZ9 186 aa12.56□□□□□ -0.4
CDK4-215ENST00000553237 CD200R1LQ6Q8B3 271 aa12.56□□□□□ -0.4
CDK4-215ENST00000553237 TGIF2LXQ8IUE1 241 aa12.56□□□□□ -0.4
CDK4-215ENST00000553237 IZUMO1Q8IYV9 350 aa12.56□□□□□ -0.4
CDK4-215ENST00000553237 Q8N6K4 173 aa12.56□□□□□ -0.4
CDK4-215ENST00000553237 KCNG3Q8TAE7 436 aa12.56□□□□□ -0.4
CDK4-215ENST00000553237 NEDD4LQ96PU5 975 aa12.56□□□□□ -0.4
CDK4-215ENST00000553237 SULT4A1Q9BR01 284 aa12.56□□□□□ -0.4
CDK4-215ENST00000553237 FAAP24Q9BTP7 215 aa12.56□□□□□ -0.4
CDK4-215ENST00000553237 MBNL3Q9NUK0 354 aaKnown RBP12.56□□□□□ -0.4
CDK4-215ENST00000553237 TRDV1A0A1B0GX56 115 aa12.55□□□□□ -0.4
CDK4-215ENST00000553237 SLC17A2O00624 439 aa12.55□□□□□ -0.4
CDK4-215ENST00000553237 BPNT1O95861 308 aa12.55□□□□□ -0.4
CDK4-215ENST00000553237 MOSP00540 346 aa12.55□□□□□ -0.4
CDK4-215ENST00000553237 IGHG2P01859 326 aa12.55□□□□□ -0.4
CDK4-215ENST00000553237 CD1BP29016 333 aa12.55□□□□□ -0.4
CDK4-215ENST00000553237 QRFPP83859 136 aa12.55□□□□□ -0.4
CDK4-215ENST00000553237 RAB11BQ15907 218 aa12.55□□□□□ -0.4
CDK4-215ENST00000553237 TMEM30BQ3MIR4 351 aa12.55□□□□□ -0.4
CDK4-215ENST00000553237 KCTD21Q4G0X4 260 aa12.55□□□□□ -0.4
CDK4-215ENST00000553237 MORN2Q502X0 79 aa12.55□□□□□ -0.4
CDK4-215ENST00000553237 C6orf201Q7Z4U5 140 aa12.55□□□□□ -0.4
CDK4-215ENST00000553237 Q8N9W7 124 aa12.55□□□□□ -0.4
CDK4-215ENST00000553237 CHPT1Q8WUD6 406 aa12.55□□□□□ -0.4
CDK4-215ENST00000553237 TMEM59Q9BXS4 323 aa12.55□□□□□ -0.4
CDK4-215ENST00000553237 NECAP2Q9NVZ3 263 aa12.55□□□□□ -0.4
CDK4-215ENST00000553237 V9GY05 133 aa12.55□□□□□ -0.4
CDK4-215ENST00000553237 TMEM14DPA8MWL7 114 aa12.54□□□□□ -0.4
CDK4-215ENST00000553237 ARSBP15848 533 aa12.54□□□□□ -0.4
CDK4-215ENST00000553237 CHATP28329 748 aa12.54□□□□□ -0.4
CDK4-215ENST00000553237 PPP1CCP36873 323 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms