RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 ZNF880Q6PDB4 577 aa8.34□□□□□ -1.07
TRAFD1-208ENST00000552890 TCF23Q7RTU1 214 aa8.34□□□□□ -1.07
TRAFD1-208ENST00000552890 THNSL2Q86YJ6 484 aa8.34□□□□□ -1.07
TRAFD1-208ENST00000552890 BCL6BQ8N143 479 aaPredicted RBP8.34□□□□□ -1.07
TRAFD1-208ENST00000552890 OR4K15Q8NH41 348 aa8.34□□□□□ -1.07
TRAFD1-208ENST00000552890 RFESDQ8TAC1 157 aa8.34□□□□□ -1.07
TRAFD1-208ENST00000552890 MRPL30Q8TCC3 161 aaKnown RBP8.34□□□□□ -1.07
TRAFD1-208ENST00000552890 BORCS5Q969J3 196 aa8.34□□□□□ -1.07
TRAFD1-208ENST00000552890 TOMM40LQ969M1 308 aa8.34□□□□□ -1.07
TRAFD1-208ENST00000552890 NICN1Q9BSH3 213 aa8.34□□□□□ -1.07
TRAFD1-208ENST00000552890 NPFFR1Q9GZQ6 430 aa8.34□□□□□ -1.07
TRAFD1-208ENST00000552890 RANBP3Q9H6Z4 567 aaPredicted RBP8.34□□□□□ -1.07
TRAFD1-208ENST00000552890 BEX1Q9HBH7 125 aa8.34□□□□□ -1.07
TRAFD1-208ENST00000552890 ZNF286AQ9HBT8 521 aa8.34□□□□□ -1.07
TRAFD1-208ENST00000552890 PIPOXQ9P0Z9 390 aa8.34□□□□□ -1.07
TRAFD1-208ENST00000552890 SLC23A1Q9UHI7 598 aa8.34□□□□□ -1.07
TRAFD1-208ENST00000552890 AK3Q9UIJ7 227 aa8.34□□□□□ -1.07
TRAFD1-208ENST00000552890 PSG11Q9UQ72 335 aa8.34□□□□□ -1.07
TRAFD1-208ENST00000552890 FOXI3A8MTJ6 420 aaPredicted RBP8.33□□□□□ -1.08
TRAFD1-208ENST00000552890 ZNF701M0R085 212 aaPredicted RBP8.33□□□□□ -1.08
TRAFD1-208ENST00000552890 XRCC3O43542 346 aa8.33□□□□□ -1.08
TRAFD1-208ENST00000552890 NDUFA7O95182 113 aa8.33□□□□□ -1.08
TRAFD1-208ENST00000552890 APOA1P02647 267 aa8.33□□□□□ -1.08
TRAFD1-208ENST00000552890 TFAP2AP05549 437 aa8.33□□□□□ -1.08
TRAFD1-208ENST00000552890 SMIM18P0DKX4 95 aa8.33□□□□□ -1.08
TRAFD1-208ENST00000552890 HKR1P10072 659 aa8.33□□□□□ -1.08
TRAFD1-208ENST00000552890 SLC2A2P11168 524 aaPredicted RBP8.33□□□□□ -1.08
TRAFD1-208ENST00000552890 ZNF182P17025 639 aaPredicted RBP8.33□□□□□ -1.08
TRAFD1-208ENST00000552890 OMGP23515 440 aa8.33□□□□□ -1.08
TRAFD1-208ENST00000552890 SSTR5P35346 364 aa8.33□□□□□ -1.08
TRAFD1-208ENST00000552890 RPS19P39019 145 aaKnown RBP8.33□□□□□ -1.08
TRAFD1-208ENST00000552890 COMPP49747 757 aaPredicted RBP8.33□□□□□ -1.08
TRAFD1-208ENST00000552890 HLA-DRB3P79483 266 aa8.33□□□□□ -1.08
TRAFD1-208ENST00000552890 HMGN3Q15651 99 aa8.33□□□□□ -1.08
TRAFD1-208ENST00000552890 CDNFQ49AH0 187 aa8.33□□□□□ -1.08
TRAFD1-208ENST00000552890 BRICD5Q6PL45 260 aa8.33□□□□□ -1.08
TRAFD1-208ENST00000552890 SLC25A48Q6ZT89 311 aaKnown RBP8.33□□□□□ -1.08
TRAFD1-208ENST00000552890 PRR18Q8N4B5 295 aa8.33□□□□□ -1.08
TRAFD1-208ENST00000552890 ZDHHC22Q8N966 263 aa8.33□□□□□ -1.08
TRAFD1-208ENST00000552890 OR8H1Q8NGG4 311 aa8.33□□□□□ -1.08
TRAFD1-208ENST00000552890 OR4P4Q8NGL7 312 aa8.33□□□□□ -1.08
TRAFD1-208ENST00000552890 OR4C13Q8NGP0 309 aa8.33□□□□□ -1.08
TRAFD1-208ENST00000552890 OR10J5Q8NHC4 309 aa8.33□□□□□ -1.08
TRAFD1-208ENST00000552890 SETD6Q8TBK2 473 aa8.33□□□□□ -1.08
TRAFD1-208ENST00000552890 LGALS14Q8TCE9 139 aa8.33□□□□□ -1.08
TRAFD1-208ENST00000552890 IL1F10Q8WWZ1 152 aa8.33□□□□□ -1.08
TRAFD1-208ENST00000552890 Q9N2K0 584 aa8.33□□□□□ -1.08
TRAFD1-208ENST00000552890 MMP24Q9Y5R2 645 aa8.33□□□□□ -1.08
TRAFD1-208ENST00000552890 SHISA3A0PJX4 238 aa8.32□□□□□ -1.08
TRAFD1-208ENST00000552890 TMEM89A2RUT3 159 aa8.32□□□□□ -1.08
TRAFD1-208ENST00000552890 MFNGO00587 321 aa8.32□□□□□ -1.08
TRAFD1-208ENST00000552890 RAB29O14966 203 aa8.32□□□□□ -1.08
TRAFD1-208ENST00000552890 SNRPBP14678 240 aaKnown RBP8.32□□□□□ -1.08
TRAFD1-208ENST00000552890 RCC1P18754 421 aaPredicted RBP8.32□□□□□ -1.08
TRAFD1-208ENST00000552890 ZNF137PP52743 207 aa8.32□□□□□ -1.08
TRAFD1-208ENST00000552890 TMEM50BP56557 158 aa8.32□□□□□ -1.08
TRAFD1-208ENST00000552890 LOXL3P58215 753 aa8.32□□□□□ -1.08
TRAFD1-208ENST00000552890 VBP1P61758 197 aa8.32□□□□□ -1.08
TRAFD1-208ENST00000552890 LSM3P62310 102 aaKnown RBP8.32□□□□□ -1.08
TRAFD1-208ENST00000552890 ZNF816Q0VGE8 651 aaPredicted RBP8.32□□□□□ -1.08
TRAFD1-208ENST00000552890 MORN2Q502X0 79 aa8.32□□□□□ -1.08
TRAFD1-208ENST00000552890 TPTE2P1Q5T6R2 138 aa8.32□□□□□ -1.08
TRAFD1-208ENST00000552890 BAIAP2L2Q6UXY1 529 aa8.32□□□□□ -1.08
TRAFD1-208ENST00000552890 C12orf54Q6X4T0 127 aa8.32□□□□□ -1.08
TRAFD1-208ENST00000552890 CLVS1Q8IUQ0 354 aaPredicted RBP8.32□□□□□ -1.08
TRAFD1-208ENST00000552890 SAMD12Q8N8I0 201 aa8.32□□□□□ -1.08
TRAFD1-208ENST00000552890 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.32□□□□□ -1.08
TRAFD1-208ENST00000552890 ZNF48Q96MX3 618 aaPredicted RBP8.32□□□□□ -1.08
TRAFD1-208ENST00000552890 GINS4Q9BRT9 223 aa8.32□□□□□ -1.08
TRAFD1-208ENST00000552890 ABHD14AQ9BUJ0 271 aa8.32□□□□□ -1.08
TRAFD1-208ENST00000552890 C19orf24Q9BVV8 132 aa8.32□□□□□ -1.08
TRAFD1-208ENST00000552890 C1RLQ9NZP8 487 aa8.32□□□□□ -1.08
TRAFD1-208ENST00000552890 ZNF221Q9UK13 617 aa8.32□□□□□ -1.08
TRAFD1-208ENST00000552890 A0A0A6YYD4 124 aa8.31□□□□□ -1.08
TRAFD1-208ENST00000552890 A0A1W2PRD5 423 aa8.31□□□□□ -1.08
TRAFD1-208ENST00000552890 A0A1W2PRF3 423 aa8.31□□□□□ -1.08
TRAFD1-208ENST00000552890 A0A1W2PRM7 423 aa8.31□□□□□ -1.08
TRAFD1-208ENST00000552890 H3BUX3 64 aa8.31□□□□□ -1.08
TRAFD1-208ENST00000552890 FABP7O15540 132 aa8.31□□□□□ -1.08
TRAFD1-208ENST00000552890 LANCL1O43813 399 aa8.31□□□□□ -1.08
TRAFD1-208ENST00000552890 GPR137BO60478 399 aa8.31□□□□□ -1.08
TRAFD1-208ENST00000552890 IGHV4-59P01825 116 aa8.31□□□□□ -1.08
TRAFD1-208ENST00000552890 FCGR3AP08637 254 aa8.31□□□□□ -1.08
TRAFD1-208ENST00000552890 GNB3P16520 340 aa8.31□□□□□ -1.08
TRAFD1-208ENST00000552890 CD1BP29016 333 aa8.31□□□□□ -1.08
TRAFD1-208ENST00000552890 MC5RP33032 325 aa8.31□□□□□ -1.08
TRAFD1-208ENST00000552890 ARPC4P59998 168 aa8.31□□□□□ -1.08
TRAFD1-208ENST00000552890 CBX3Q13185 183 aa8.31□□□□□ -1.08
TRAFD1-208ENST00000552890 CTF1Q16619 201 aa8.31□□□□□ -1.08
TRAFD1-208ENST00000552890 PLAC9Q5JTB6 97 aa8.31□□□□□ -1.08
TRAFD1-208ENST00000552890 TMEM69Q5SWH9 247 aa8.31□□□□□ -1.08
TRAFD1-208ENST00000552890 CNIH2Q6PI25 160 aa8.31□□□□□ -1.08
TRAFD1-208ENST00000552890 NR2C2APQ86WQ0 139 aa8.31□□□□□ -1.08
TRAFD1-208ENST00000552890 TGIF2LXQ8IUE1 241 aa8.31□□□□□ -1.08
TRAFD1-208ENST00000552890 SCPEP1Q9HB40 452 aa8.31□□□□□ -1.08
TRAFD1-208ENST00000552890 TCF19Q9Y242 345 aa8.31□□□□□ -1.08
TRAFD1-208ENST00000552890 HILPDAQ9Y5L2 63 aa8.31□□□□□ -1.08
TRAFD1-208ENST00000552890 A0A075B6Q4 140 aa8.3□□□□□ -1.08
TRAFD1-208ENST00000552890 TRAV18A0A075B6X5 111 aa8.3□□□□□ -1.08
TRAFD1-208ENST00000552890 FAM181BA6NEQ2 426 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms