RNA–Protein interactions for RNA: ENST00000552783.5

LIMA1-214, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-214ENST00000552783 LBHQ53QV2 105 aaPredicted RBP4.15□□□□□ -1.75
LIMA1-214ENST00000552783 SLC23A3Q6PIS1 610 aa4.15□□□□□ -1.75
LIMA1-214ENST00000552783 MRPL41Q8IXM3 137 aaKnown RBP4.15□□□□□ -1.75
LIMA1-214ENST00000552783 RPP25LQ8N5L8 163 aaKnown RBP4.15□□□□□ -1.75
LIMA1-214ENST00000552783 GJC3Q8NFK1 279 aa4.15□□□□□ -1.75
LIMA1-214ENST00000552783 OR8G5Q8NG78 346 aa4.15□□□□□ -1.75
LIMA1-214ENST00000552783 UBALD1Q8TB05 177 aa4.15□□□□□ -1.75
LIMA1-214ENST00000552783 HLA-CQ95604 372 aa4.15□□□□□ -1.75
LIMA1-214ENST00000552783 RBMXL1Q96E39 390 aaKnown RBP4.15□□□□□ -1.75
LIMA1-214ENST00000552783 ZNF845Q96IR2 970 aaPredicted RBP4.15□□□□□ -1.75
LIMA1-214ENST00000552783 SMIM7Q9BQ49 75 aa4.15□□□□□ -1.75
LIMA1-214ENST00000552783 R4GN57 208 aa4.15□□□□□ -1.75
LIMA1-214ENST00000552783 A0A1W2PQM1 296 aa4.14□□□□□ -1.75
LIMA1-214ENST00000552783 PGPEP1LA6NFU8 196 aa4.14□□□□□ -1.75
LIMA1-214ENST00000552783 C1QTNF9BB2RNN3 333 aa4.14□□□□□ -1.75
LIMA1-214ENST00000552783 B4DEV8 164 aa4.14□□□□□ -1.75
LIMA1-214ENST00000552783 LILRA1O75019 489 aa4.14□□□□□ -1.75
LIMA1-214ENST00000552783 IGKV1-39P01597 117 aa4.14□□□□□ -1.75
LIMA1-214ENST00000552783 OPN1MWP04001 364 aa4.14□□□□□ -1.75
LIMA1-214ENST00000552783 IGKV1D-39P04432 117 aa4.14□□□□□ -1.75
LIMA1-214ENST00000552783 OPN1MW2P0DN77 364 aa4.14□□□□□ -1.75
LIMA1-214ENST00000552783 OPN1MW3P0DN78 364 aa4.14□□□□□ -1.75
LIMA1-214ENST00000552783 IRF2P14316 349 aa4.14□□□□□ -1.75
LIMA1-214ENST00000552783 RAB4AP20338 218 aa4.14□□□□□ -1.75
LIMA1-214ENST00000552783 NPPCP23582 126 aa4.14□□□□□ -1.75
LIMA1-214ENST00000552783 TFPI2P48307 235 aa4.14□□□□□ -1.75
LIMA1-214ENST00000552783 SSR4P51571 173 aa4.14□□□□□ -1.75
LIMA1-214ENST00000552783 RELQ04864 619 aaPredicted RBP4.14□□□□□ -1.75
LIMA1-214ENST00000552783 KCNMB1Q16558 191 aa4.14□□□□□ -1.75
LIMA1-214ENST00000552783 TRIM61Q5EBN2 209 aa4.14□□□□□ -1.75
LIMA1-214ENST00000552783 COA6Q5JTJ3 125 aaKnown RBP4.14□□□□□ -1.75
LIMA1-214ENST00000552783 PLCXD3Q63HM9 321 aa4.14□□□□□ -1.75
LIMA1-214ENST00000552783 TCEAL6Q6IPX3 200 aa4.14□□□□□ -1.75
LIMA1-214ENST00000552783 AAED1Q7RTV5 226 aa4.14□□□□□ -1.75
LIMA1-214ENST00000552783 RABEPKQ7Z6M1 372 aa4.14□□□□□ -1.75
LIMA1-214ENST00000552783 FAM185AQ8N0U4 392 aa4.14□□□□□ -1.75
LIMA1-214ENST00000552783 OSR2Q8N2R0 312 aa4.14□□□□□ -1.75
LIMA1-214ENST00000552783 SPEM1Q8N4L4 309 aa4.14□□□□□ -1.75
LIMA1-214ENST00000552783 AGBL5Q8NDL9 886 aa4.14□□□□□ -1.75
LIMA1-214ENST00000552783 CADM4Q8NFZ8 388 aa4.14□□□□□ -1.75
LIMA1-214ENST00000552783 OR51H1Q8NH63 302 aa4.14□□□□□ -1.75
LIMA1-214ENST00000552783 IFI44Q8TCB0 444 aa4.14□□□□□ -1.75
LIMA1-214ENST00000552783 OR5P3Q8WZ94 311 aa4.14□□□□□ -1.75
LIMA1-214ENST00000552783 GNPNAT1Q96EK6 184 aaPredicted RBP4.14□□□□□ -1.75
LIMA1-214ENST00000552783 OXGR1Q96P68 337 aa4.14□□□□□ -1.75
LIMA1-214ENST00000552783 PYGO2Q9BRQ0 406 aa4.14□□□□□ -1.75
LIMA1-214ENST00000552783 DUSP23Q9BVJ7 150 aa4.14□□□□□ -1.75
LIMA1-214ENST00000552783 FGF23Q9GZV9 251 aaPredicted RBP4.14□□□□□ -1.75
LIMA1-214ENST00000552783 TRAV1-1A0A0B4J248 108 aa4.14□□□□□ -1.75
LIMA1-214ENST00000552783 C10orf142B7Z368 130 aa4.14□□□□□ -1.75
LIMA1-214ENST00000552783 DHHO43323 396 aa4.14□□□□□ -1.75
LIMA1-214ENST00000552783 SCGB1D1O95968 90 aa4.14□□□□□ -1.75
LIMA1-214ENST00000552783 FRMD6-AS1P0C7T7 363 aa4.14□□□□□ -1.75
LIMA1-214ENST00000552783 CCL2P13500 99 aa4.14□□□□□ -1.75
LIMA1-214ENST00000552783 TCN2P20062 427 aa4.14□□□□□ -1.75
LIMA1-214ENST00000552783 GCH1P30793 250 aa4.14□□□□□ -1.75
LIMA1-214ENST00000552783 FOLR3P41439 243 aa4.14□□□□□ -1.75
LIMA1-214ENST00000552783 GALR1P47211 349 aa4.14□□□□□ -1.75
LIMA1-214ENST00000552783 PDLIM4P50479 330 aa4.14□□□□□ -1.75
LIMA1-214ENST00000552783 ZNF92Q03936 586 aa4.14□□□□□ -1.75
LIMA1-214ENST00000552783 TRA2AQ13595 282 aaKnown RBP eCLIP4.14□□□□□ -1.75
LIMA1-214ENST00000552783 FAM189A2Q15884 450 aa4.14□□□□□ -1.75
LIMA1-214ENST00000552783 SLC25A26Q70HW3 274 aa4.14□□□□□ -1.75
LIMA1-214ENST00000552783 TCF23Q7RTU1 214 aa4.14□□□□□ -1.75
LIMA1-214ENST00000552783 MCEMP1Q8IX19 187 aa4.14□□□□□ -1.75
LIMA1-214ENST00000552783 H1FOOQ8IZA3 346 aaPredicted RBP4.14□□□□□ -1.75
LIMA1-214ENST00000552783 NFAM1Q8NET5 270 aaPredicted RBP4.14□□□□□ -1.75
LIMA1-214ENST00000552783 OR10G4Q8NGN3 311 aa4.14□□□□□ -1.75
LIMA1-214ENST00000552783 OR2V1Q8NHB1 315 aa4.14□□□□□ -1.75
LIMA1-214ENST00000552783 IL1F10Q8WWZ1 152 aa4.14□□□□□ -1.75
LIMA1-214ENST00000552783 GPR146Q96CH1 333 aa4.14□□□□□ -1.75
LIMA1-214ENST00000552783 PLK3Q9H4B4 646 aa4.14□□□□□ -1.75
LIMA1-214ENST00000552783 ZNF286AQ9HBT8 521 aa4.14□□□□□ -1.75
LIMA1-214ENST00000552783 PRSS50Q9UI38 385 aa4.14□□□□□ -1.75
LIMA1-214ENST00000552783 RNF114Q9Y508 228 aa4.14□□□□□ -1.75
LIMA1-214ENST00000552783 PCNX1Q96RV3 2341 aa4.14□□□□□ -1.75
LIMA1-214ENST00000552783 LAMA5O15230 3695 aa4.14□□□□□ -1.75
LIMA1-214ENST00000552783 IGHV5-10-1A0A0J9YXX1 117 aa4.14□□□□□ -1.75
LIMA1-214ENST00000552783 GRIFINA4D1Z8 144 aa4.14□□□□□ -1.75
LIMA1-214ENST00000552783 ZNF737O75373 536 aa4.14□□□□□ -1.75
LIMA1-214ENST00000552783 DFFBO76075 338 aa4.14□□□□□ -1.75
LIMA1-214ENST00000552783 PSG2P11465 335 aa4.14□□□□□ -1.75
LIMA1-214ENST00000552783 EDN3P14138 238 aa4.14□□□□□ -1.75
LIMA1-214ENST00000552783 MSX1P28360 303 aa4.14□□□□□ -1.75
LIMA1-214ENST00000552783 CHRNA7P36544 502 aa4.14□□□□□ -1.75
LIMA1-214ENST00000552783 IDH3GP51553 393 aaPredicted RBP4.14□□□□□ -1.75
LIMA1-214ENST00000552783 UCP3P55916 312 aa4.14□□□□□ -1.75
LIMA1-214ENST00000552783 CARD18P57730 90 aa4.14□□□□□ -1.75
LIMA1-214ENST00000552783 PLGLB1Q02325 96 aa4.14□□□□□ -1.75
LIMA1-214ENST00000552783 WIPI1Q5MNZ9 446 aaPredicted RBP4.14□□□□□ -1.75
LIMA1-214ENST00000552783 LINC00696Q6ZRV3 163 aa4.14□□□□□ -1.75
LIMA1-214ENST00000552783 SDSLQ96GA7 329 aa4.14□□□□□ -1.75
LIMA1-214ENST00000552783 GPR27Q9NS67 375 aa4.14□□□□□ -1.75
LIMA1-214ENST00000552783 MAP1LC3B2A6NCE7 125 aa4.13□□□□□ -1.75
LIMA1-214ENST00000552783 AQP7P3A6NL99 342 aa4.13□□□□□ -1.75
LIMA1-214ENST00000552783 FAM166BA8MTA8 275 aa4.13□□□□□ -1.75
LIMA1-214ENST00000552783 PPP5D1E7EU14 171 aa4.13□□□□□ -1.75
LIMA1-214ENST00000552783 DLEU1O43261 78 aa4.13□□□□□ -1.75
LIMA1-214ENST00000552783 LAMTOR5O43504 91 aa4.13□□□□□ -1.75
LIMA1-214ENST00000552783 PDCD6O75340 191 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms