RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 HMGN3Q15651 99 aa14.88□□□□□ -0.03
PRPF40B-216ENST00000552301 OLFML2AQ68BL7 652 aa14.88□□□□□ -0.03
PRPF40B-216ENST00000552301 Q6ZSV7 163 aa14.88□□□□□ -0.03
PRPF40B-216ENST00000552301 TMEM219Q86XT9 240 aa14.88□□□□□ -0.03
PRPF40B-216ENST00000552301 LINC00311Q8N616 119 aa14.88□□□□□ -0.03
PRPF40B-216ENST00000552301 C8orf31Q8N9H6 132 aa14.88□□□□□ -0.03
PRPF40B-216ENST00000552301 DTX3Q8N9I9 347 aa14.88□□□□□ -0.03
PRPF40B-216ENST00000552301 OR10R2Q8NGX6 335 aa14.88□□□□□ -0.03
PRPF40B-216ENST00000552301 PTX4Q96A99 478 aa14.88□□□□□ -0.03
PRPF40B-216ENST00000552301 YIPF6Q96EC8 236 aa14.88□□□□□ -0.03
PRPF40B-216ENST00000552301 ATG5Q9H1Y0 275 aa14.88□□□□□ -0.03
PRPF40B-216ENST00000552301 JPT1Q9UK76 154 aa14.88□□□□□ -0.03
PRPF40B-216ENST00000552301 A0A075B6Q4 140 aa14.87□□□□□ -0.03
PRPF40B-216ENST00000552301 A6NDX4 124 aa14.87□□□□□ -0.03
PRPF40B-216ENST00000552301 TRIM64CA6NLI5 447 aa14.87□□□□□ -0.03
PRPF40B-216ENST00000552301 CHST1O43916 411 aa14.87□□□□□ -0.03
PRPF40B-216ENST00000552301 RGS11O94810 467 aa14.87□□□□□ -0.03
PRPF40B-216ENST00000552301 LPLP06858 475 aa14.87□□□□□ -0.03
PRPF40B-216ENST00000552301 CLEC2LP0C7M8 214 aa14.87□□□□□ -0.03
PRPF40B-216ENST00000552301 TMEM50BP56557 158 aa14.87□□□□□ -0.03
PRPF40B-216ENST00000552301 LGALS14Q8TCE9 139 aa14.87□□□□□ -0.03
PRPF40B-216ENST00000552301 IL1F10Q8WWZ1 152 aa14.87□□□□□ -0.03
PRPF40B-216ENST00000552301 AKR1E2Q96JD6 320 aa14.87□□□□□ -0.03
PRPF40B-216ENST00000552301 OCSTAMPQ9BR26 566 aa14.87□□□□□ -0.03
PRPF40B-216ENST00000552301 HDHD3Q9BSH5 251 aaPredicted RBP14.87□□□□□ -0.03
PRPF40B-216ENST00000552301 RANBP3Q9H6Z4 567 aaPredicted RBP14.87□□□□□ -0.03
PRPF40B-216ENST00000552301 RNF114Q9Y508 228 aa14.87□□□□□ -0.03
PRPF40B-216ENST00000552301 TRBV6-6A0A0A6YYG2 114 aa14.86□□□□□ -0.03
PRPF40B-216ENST00000552301 LY6LH3BQJ8 138 aa14.86□□□□□ -0.03
PRPF40B-216ENST00000552301 HSD17B6O14756 317 aa14.86□□□□□ -0.03
PRPF40B-216ENST00000552301 TSPAN9O75954 239 aa14.86□□□□□ -0.03
PRPF40B-216ENST00000552301 SCGNO76038 276 aa14.86□□□□□ -0.03
PRPF40B-216ENST00000552301 SNRPBP14678 240 aaKnown RBP14.86□□□□□ -0.03
PRPF40B-216ENST00000552301 HTD2P86397 168 aa14.86□□□□□ -0.03
PRPF40B-216ENST00000552301 ARL6IP1Q15041 203 aa14.86□□□□□ -0.03
PRPF40B-216ENST00000552301 MOGAT2Q3SYC2 334 aa14.86□□□□□ -0.03
PRPF40B-216ENST00000552301 PLAC9Q5JTB6 97 aa14.86□□□□□ -0.03
PRPF40B-216ENST00000552301 IDNKQ5T6J7 187 aa14.86□□□□□ -0.03
PRPF40B-216ENST00000552301 OR8H3Q8N146 312 aa14.86□□□□□ -0.03
PRPF40B-216ENST00000552301 OR52L2PQ8NGH6 319 aa14.86□□□□□ -0.03
PRPF40B-216ENST00000552301 LINC01006Q8NI28 216 aa14.86□□□□□ -0.03
PRPF40B-216ENST00000552301 ZNF747Q9BV97 191 aa14.86□□□□□ -0.03
PRPF40B-216ENST00000552301 GAPDHP04406 335 aaKnown RBP14.85□□□□□ -0.03
PRPF40B-216ENST00000552301 HIST1H1DP16402 221 aaKnown RBP14.85□□□□□ -0.03
PRPF40B-216ENST00000552301 CD24P25063 80 aa14.85□□□□□ -0.03
PRPF40B-216ENST00000552301 LSM3P62310 102 aaKnown RBP14.85□□□□□ -0.03
PRPF40B-216ENST00000552301 HLA-DRB3P79483 266 aa14.85□□□□□ -0.03
PRPF40B-216ENST00000552301 ARFRP1Q13795 201 aa14.85□□□□□ -0.03
PRPF40B-216ENST00000552301 GNMTQ14749 295 aa14.85□□□□□ -0.03
PRPF40B-216ENST00000552301 ARSJQ5FYB0 599 aaPredicted RBP14.85□□□□□ -0.03
PRPF40B-216ENST00000552301 STEAP3Q658P3 488 aa14.85□□□□□ -0.03
PRPF40B-216ENST00000552301 FAM53AQ6NSI3 398 aaPredicted RBP14.85□□□□□ -0.03
PRPF40B-216ENST00000552301 ZNF880Q6PDB4 577 aa14.85□□□□□ -0.03
PRPF40B-216ENST00000552301 SHISA2Q6UWI4 295 aa14.85□□□□□ -0.03
PRPF40B-216ENST00000552301 CROCCP3Q8IVE0 287 aa14.85□□□□□ -0.03
PRPF40B-216ENST00000552301 OR56B4Q8NH76 319 aa14.85□□□□□ -0.03
PRPF40B-216ENST00000552301 OR2T6Q8NHC8 308 aa14.85□□□□□ -0.03
PRPF40B-216ENST00000552301 PHF21AQ96BD5 680 aa14.85□□□□□ -0.03
PRPF40B-216ENST00000552301 C16orf95Q9H693 158 aa14.85□□□□□ -0.03
PRPF40B-216ENST00000552301 ETV7Q9Y603 341 aa14.85□□□□□ -0.03
PRPF40B-216ENST00000552301 ANK2Q01484 3957 aa14.84□□□□□ -0.03
PRPF40B-216ENST00000552301 SERPINE3A8MV23 424 aa14.84□□□□□ -0.03
PRPF40B-216ENST00000552301 RAB27BO00194 218 aa14.84□□□□□ -0.03
PRPF40B-216ENST00000552301 TIMM23O14925 209 aa14.84□□□□□ -0.03
PRPF40B-216ENST00000552301 HSPA12AO43301 675 aa14.84□□□□□ -0.03
PRPF40B-216ENST00000552301 FAM106CPP0CH98 169 aa14.84□□□□□ -0.03
PRPF40B-216ENST00000552301 SMIM18P0DKX4 95 aa14.84□□□□□ -0.03
PRPF40B-216ENST00000552301 GNB3P16520 340 aa14.84□□□□□ -0.03
PRPF40B-216ENST00000552301 PPP1CCP36873 323 aaKnown RBP14.84□□□□□ -0.03
PRPF40B-216ENST00000552301 TALDO1P37837 337 aa14.84□□□□□ -0.03
PRPF40B-216ENST00000552301 SCAND1P57086 179 aa14.84□□□□□ -0.03
PRPF40B-216ENST00000552301 HES1Q14469 280 aa14.84□□□□□ -0.03
PRPF40B-216ENST00000552301 MORN2Q502X0 79 aa14.84□□□□□ -0.03
PRPF40B-216ENST00000552301 CCBE1Q6UXH8 406 aaPredicted RBP14.84□□□□□ -0.03
PRPF40B-216ENST00000552301 SLC25A48Q6ZT89 311 aaKnown RBP14.84□□□□□ -0.03
PRPF40B-216ENST00000552301 C16orf82Q7Z2V1 217 aa14.84□□□□□ -0.03
PRPF40B-216ENST00000552301 WFDC12Q8WWY7 111 aa14.84□□□□□ -0.03
PRPF40B-216ENST00000552301 ABHD14AQ9BUJ0 271 aa14.84□□□□□ -0.03
PRPF40B-216ENST00000552301 MRPS26Q9BYN8 205 aaKnown RBP14.84□□□□□ -0.03
PRPF40B-216ENST00000552301 Q9N2K0 584 aa14.84□□□□□ -0.03
PRPF40B-216ENST00000552301 RHBDL2Q9NX52 303 aa14.84□□□□□ -0.03
PRPF40B-216ENST00000552301 A0A1W2PPI3 338 aa14.83□□□□□ -0.04
PRPF40B-216ENST00000552301 MFNGO00587 321 aa14.83□□□□□ -0.04
PRPF40B-216ENST00000552301 SLC31A2O15432 143 aa14.83□□□□□ -0.04
PRPF40B-216ENST00000552301 TXNL1O43396 289 aa14.83□□□□□ -0.04
PRPF40B-216ENST00000552301 YPEL1O60688 119 aa14.83□□□□□ -0.04
PRPF40B-216ENST00000552301 TMEM127O75204 238 aa14.83□□□□□ -0.04
PRPF40B-216ENST00000552301 REG1BP48304 166 aa14.83□□□□□ -0.04
PRPF40B-216ENST00000552301 ZNF816Q0VGE8 651 aaPredicted RBP14.83□□□□□ -0.04
PRPF40B-216ENST00000552301 MOB3BQ86TA1 216 aa14.83□□□□□ -0.04
PRPF40B-216ENST00000552301 LYG1Q8N1E2 194 aa14.83□□□□□ -0.04
PRPF40B-216ENST00000552301 DRAM1Q8N682 238 aa14.83□□□□□ -0.04
PRPF40B-216ENST00000552301 ZNF439Q8NDP4 499 aa14.83□□□□□ -0.04
PRPF40B-216ENST00000552301 OR2AK2Q8NG84 335 aa14.83□□□□□ -0.04
PRPF40B-216ENST00000552301 YPEL2Q96QA6 119 aa14.83□□□□□ -0.04
PRPF40B-216ENST00000552301 SLC25A33Q9BSK2 321 aa14.83□□□□□ -0.04
PRPF40B-216ENST00000552301 FUNDC2Q9BWH2 189 aa14.83□□□□□ -0.04
PRPF40B-216ENST00000552301 SNRNP70P08621 437 aaKnown RBP14.82□□□□□ -0.04
PRPF40B-216ENST00000552301 KIR2DS4P43632 304 aa14.82□□□□□ -0.04
PRPF40B-216ENST00000552301 DIAPH2-AS1Q14236 149 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms