RNA–Protein interactions for RNA: ENST00000552130.6

VPS29-210, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-210ENST00000552130 STPG1Q5TH74 334 aa4.74□□□□□ -1.65
VPS29-210ENST00000552130 ZNF343Q6P1L6 599 aa4.74□□□□□ -1.65
VPS29-210ENST00000552130 Q6ZRU5 148 aa4.74□□□□□ -1.65
VPS29-210ENST00000552130 RFLNAQ6ZTI6 216 aa4.74□□□□□ -1.65
VPS29-210ENST00000552130 H2AFVQ71UI9 128 aa4.74□□□□□ -1.65
VPS29-210ENST00000552130 FA2HQ7L5A8 372 aa4.74□□□□□ -1.65
VPS29-210ENST00000552130 ATP5L2Q7Z4Y8 100 aa4.74□□□□□ -1.65
VPS29-210ENST00000552130 ZIC4Q8N9L1 334 aa4.74□□□□□ -1.65
VPS29-210ENST00000552130 OR8B12Q8NGG6 310 aa4.74□□□□□ -1.65
VPS29-210ENST00000552130 ZNF675Q8TD23 568 aa4.74□□□□□ -1.65
VPS29-210ENST00000552130 TMEM203Q969S6 136 aa4.74□□□□□ -1.65
VPS29-210ENST00000552130 GALMQ96C23 342 aa4.74□□□□□ -1.65
VPS29-210ENST00000552130 ZNF524Q96C55 264 aa4.74□□□□□ -1.65
VPS29-210ENST00000552130 TCEAL7Q9BRU2 100 aa4.74□□□□□ -1.65
VPS29-210ENST00000552130 TMEM243Q9BU79 118 aa4.74□□□□□ -1.65
VPS29-210ENST00000552130 TMEM126AQ9H061 195 aa4.74□□□□□ -1.65
VPS29-210ENST00000552130 TMEM222Q9H0R3 208 aa4.74□□□□□ -1.65
VPS29-210ENST00000552130 MMP26Q9NRE1 261 aa4.74□□□□□ -1.65
VPS29-210ENST00000552130 PRTFDC1Q9NRG1 225 aa4.74□□□□□ -1.65
VPS29-210ENST00000552130 FAM49BQ9NUQ9 324 aa4.74□□□□□ -1.65
VPS29-210ENST00000552130 F11RQ9Y624 299 aaKnown RBP4.74□□□□□ -1.65
VPS29-210ENST00000552130 CHD5Q8TDI0 1954 aa4.74□□□□□ -1.65
VPS29-210ENST00000552130 MRC2Q9UBG0 1479 aa4.74□□□□□ -1.65
VPS29-210ENST00000552130 TTC3P53804 2025 aa4.73□□□□□ -1.65
VPS29-210ENST00000552130 MIA2Q96PC5 1412 aa4.73□□□□□ -1.65
VPS29-210ENST00000552130 DCAF1Q9Y4B6 1507 aa4.73□□□□□ -1.65
VPS29-210ENST00000552130 BORCS7-ASMTA0A0B4J1R7 106 aa4.73□□□□□ -1.65
VPS29-210ENST00000552130 IGHV2-26A0A0B4J1V2 119 aa4.73□□□□□ -1.65
VPS29-210ENST00000552130 KLLNB2CW77 178 aa4.73□□□□□ -1.65
VPS29-210ENST00000552130 FAM25AB3EWG3 89 aa4.73□□□□□ -1.65
VPS29-210ENST00000552130 FAM25CB3EWG5 89 aa4.73□□□□□ -1.65
VPS29-210ENST00000552130 FAM25GB3EWG6 89 aa4.73□□□□□ -1.65
VPS29-210ENST00000552130 SHISA9B4DS77 424 aa4.73□□□□□ -1.65
VPS29-210ENST00000552130 SS18L1O75177 396 aaPredicted RBP4.73□□□□□ -1.65
VPS29-210ENST00000552130 NDUFC2O95298 119 aa4.73□□□□□ -1.65
VPS29-210ENST00000552130 CPMP14384 443 aa4.73□□□□□ -1.65
VPS29-210ENST00000552130 COX7A1P24310 79 aa4.73□□□□□ -1.65
VPS29-210ENST00000552130 EMP1P54849 157 aa4.73□□□□□ -1.65
VPS29-210ENST00000552130 PIGPP57054 158 aa4.73□□□□□ -1.65
VPS29-210ENST00000552130 SNRPD2P62316 118 aaKnown RBP4.73□□□□□ -1.65
VPS29-210ENST00000552130 ERCC8Q13216 396 aa4.73□□□□□ -1.65
VPS29-210ENST00000552130 ARFRP1Q13795 201 aa4.73□□□□□ -1.65
VPS29-210ENST00000552130 FCN2Q15485 313 aa4.73□□□□□ -1.65
VPS29-210ENST00000552130 KCNJ8Q15842 424 aa4.73□□□□□ -1.65
VPS29-210ENST00000552130 PRR4Q16378 134 aa4.73□□□□□ -1.65
VPS29-210ENST00000552130 AGTRAPQ6RW13 159 aa4.73□□□□□ -1.65
VPS29-210ENST00000552130 STRADAQ7RTN6 431 aa4.73□□□□□ -1.65
VPS29-210ENST00000552130 C11orf53Q8IXP5 236 aa4.73□□□□□ -1.65
VPS29-210ENST00000552130 DCAKDQ8WVC6 231 aa4.73□□□□□ -1.65
VPS29-210ENST00000552130 MBD3L1Q8WWY6 194 aa4.73□□□□□ -1.65
VPS29-210ENST00000552130 KCNS1Q96KK3 526 aa4.73□□□□□ -1.65
VPS29-210ENST00000552130 OR5M11Q96RB7 305 aa4.73□□□□□ -1.65
VPS29-210ENST00000552130 TMEM70Q9BUB7 260 aa4.73□□□□□ -1.65
VPS29-210ENST00000552130 LRRC61Q9BV99 259 aa4.73□□□□□ -1.65
VPS29-210ENST00000552130 SLC25A2Q9BXI2 301 aa4.73□□□□□ -1.65
VPS29-210ENST00000552130 JPT2Q9H910 190 aa4.73□□□□□ -1.65
VPS29-210ENST00000552130 SLC25A22Q9H936 323 aa4.73□□□□□ -1.65
VPS29-210ENST00000552130 HSPB8Q9UJY1 196 aa4.73□□□□□ -1.65
VPS29-210ENST00000552130 POMPQ9Y244 141 aa4.73□□□□□ -1.65
VPS29-210ENST00000552130 WDR81Q562E7 1941 aa4.73□□□□□ -1.65
VPS29-210ENST00000552130 DOCK3Q8IZD9 2030 aa4.73□□□□□ -1.65
VPS29-210ENST00000552130 IGKV1-27A0A075B6S5 117 aa4.72□□□□□ -1.65
VPS29-210ENST00000552130 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.72□□□□□ -1.65
VPS29-210ENST00000552130 SOCS2O14508 198 aa4.72□□□□□ -1.65
VPS29-210ENST00000552130 PPP1R3DO95685 299 aa4.72□□□□□ -1.65
VPS29-210ENST00000552130 LGALS1P09382 135 aaKnown RBP4.72□□□□□ -1.65
VPS29-210ENST00000552130 SMIM6P0DI80 62 aa4.72□□□□□ -1.65
VPS29-210ENST00000552130 CCL1P22362 96 aa4.72□□□□□ -1.65
VPS29-210ENST00000552130 CD200P41217 278 aa4.72□□□□□ -1.65
VPS29-210ENST00000552130 MP68P56378 58 aa4.72□□□□□ -1.65
VPS29-210ENST00000552130 RPS28P62857 69 aaKnown RBP4.72□□□□□ -1.65
VPS29-210ENST00000552130 MEF2CQ06413 473 aaPredicted RBP4.72□□□□□ -1.65
VPS29-210ENST00000552130 DAZ2Q13117 558 aaKnown RBP4.72□□□□□ -1.65
VPS29-210ENST00000552130 BAMBIQ13145 260 aa4.72□□□□□ -1.65
VPS29-210ENST00000552130 RNF212Q495C1 297 aa4.72□□□□□ -1.65
VPS29-210ENST00000552130 NHLRC3Q5JS37 347 aa4.72□□□□□ -1.65
VPS29-210ENST00000552130 NXNL2Q5VZ03 156 aa4.72□□□□□ -1.65
VPS29-210ENST00000552130 DNAJC24Q6P3W2 148 aa4.72□□□□□ -1.65
VPS29-210ENST00000552130 C19orf48Q6RUI8 117 aa4.72□□□□□ -1.65
VPS29-210ENST00000552130 DAZ4Q86SG3 579 aaKnown RBP4.72□□□□□ -1.65
VPS29-210ENST00000552130 ANKRD29Q8N6D5 301 aa4.72□□□□□ -1.65
VPS29-210ENST00000552130 GDPD1Q8N9F7 314 aa4.72□□□□□ -1.65
VPS29-210ENST00000552130 SERPINI1Q99574 410 aa4.72□□□□□ -1.65
VPS29-210ENST00000552130 TMEM147Q9BVK8 224 aa4.72□□□□□ -1.65
VPS29-210ENST00000552130 EIF5A2Q9GZV4 153 aaKnown RBP4.72□□□□□ -1.65
VPS29-210ENST00000552130 OR52D1Q9H346 318 aa4.72□□□□□ -1.65
VPS29-210ENST00000552130 HMG20AQ9NP66 347 aa4.72□□□□□ -1.65
VPS29-210ENST00000552130 DAZ1Q9NQZ3 744 aaKnown RBP4.72□□□□□ -1.65
VPS29-210ENST00000552130 DAZ3Q9NR90 486 aaKnown RBP4.72□□□□□ -1.65
VPS29-210ENST00000552130 KLF13Q9Y2Y9 288 aaPredicted RBP4.72□□□□□ -1.65
VPS29-210ENST00000552130 RBM7Q9Y580 266 aaKnown RBP4.72□□□□□ -1.65
VPS29-210ENST00000552130 HEY1Q9Y5J3 304 aa4.72□□□□□ -1.65
VPS29-210ENST00000552130 PXMP4Q9Y6I8 212 aa4.72□□□□□ -1.65
VPS29-210ENST00000552130 CHD2O14647 1828 aaKnown RBP4.72□□□□□ -1.65
VPS29-210ENST00000552130 NPATQ14207 1427 aa4.72□□□□□ -1.65
VPS29-210ENST00000552130 TMEM189A5PLL7 270 aa4.71□□□□□ -1.66
VPS29-210ENST00000552130 SIGLEC16A6NMB1 481 aa4.71□□□□□ -1.66
VPS29-210ENST00000552130 KNCNA6PVL3 124 aa4.71□□□□□ -1.66
VPS29-210ENST00000552130 TXNDC9O14530 226 aa4.71□□□□□ -1.66
VPS29-210ENST00000552130 DUSP14O95147 198 aaKnown RBP4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms