RNA–Protein interactions for RNA: ENST00000550611.1

LIMA1-206, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-206ENST00000550611 STPG2Q8N412 459 aa2.73□□□□□ -1.97
LIMA1-206ENST00000550611 FAM71E2Q8N5Q1 922 aa2.73□□□□□ -1.97
LIMA1-206ENST00000550611 ZNF676Q8N7Q3 588 aa2.73□□□□□ -1.97
LIMA1-206ENST00000550611 NKAIN3Q8N8D7 197 aa2.73□□□□□ -1.97
LIMA1-206ENST00000550611 C5orf56Q8N8D9 126 aa2.73□□□□□ -1.97
LIMA1-206ENST00000550611 KLHL30-AS1Q8NEE0 82 aa2.73□□□□□ -1.97
LIMA1-206ENST00000550611 OR5M8Q8NGP6 311 aa2.73□□□□□ -1.97
LIMA1-206ENST00000550611 OR6N2Q8NGY6 317 aa2.73□□□□□ -1.97
LIMA1-206ENST00000550611 OTOSQ8NHW6 89 aa2.73□□□□□ -1.97
LIMA1-206ENST00000550611 NDNFQ8TB73 568 aa2.73□□□□□ -1.97
LIMA1-206ENST00000550611 MYOZ3Q8TDC0 251 aa2.73□□□□□ -1.97
LIMA1-206ENST00000550611 STMN2Q93045 179 aa2.73□□□□□ -1.97
LIMA1-206ENST00000550611 RCN3Q96D15 328 aa2.73□□□□□ -1.97
LIMA1-206ENST00000550611 PYURFQ96I23 114 aa2.73□□□□□ -1.97
LIMA1-206ENST00000550611 ZNF714Q96N38 554 aa2.73□□□□□ -1.97
LIMA1-206ENST00000550611 TEAD3Q99594 435 aa2.73□□□□□ -1.97
LIMA1-206ENST00000550611 HOPXQ9BPY8 73 aaPredicted RBP2.73□□□□□ -1.97
LIMA1-206ENST00000550611 CLEC7AQ9BXN2 247 aa2.73□□□□□ -1.97
LIMA1-206ENST00000550611 KCNK15Q9H427 330 aa2.73□□□□□ -1.97
LIMA1-206ENST00000550611 GORASP2Q9H8Y8 452 aa2.73□□□□□ -1.97
LIMA1-206ENST00000550611 SDF2L1Q9HCN8 221 aa2.73□□□□□ -1.97
LIMA1-206ENST00000550611 C8orf4Q9NR00 106 aa2.73□□□□□ -1.97
LIMA1-206ENST00000550611 FAM206AQ9NX38 181 aa2.73□□□□□ -1.97
LIMA1-206ENST00000550611 MTCH1Q9NZJ7 389 aa2.73□□□□□ -1.97
LIMA1-206ENST00000550611 MBD2Q9UBB5 411 aa2.73□□□□□ -1.97
LIMA1-206ENST00000550611 ABCD2Q9UBJ2 740 aa2.73□□□□□ -1.97
LIMA1-206ENST00000550611 SLC22A13Q9Y226 551 aa2.73□□□□□ -1.97
LIMA1-206ENST00000550611 KLHDC2Q9Y2U9 406 aa2.73□□□□□ -1.97
LIMA1-206ENST00000550611 CBY1Q9Y3M2 126 aa2.73□□□□□ -1.97
LIMA1-206ENST00000550611 LINC00312Q9Y6C7 94 aa2.73□□□□□ -1.97
LIMA1-206ENST00000550611 RNF213Q63HN8 5207 aa2.73□□□□□ -1.97
LIMA1-206ENST00000550611 IGLV5-52A0A0A0MRZ9 124 aa2.72□□□□□ -1.97
LIMA1-206ENST00000550611 A0A1B0GTI1 187 aa2.72□□□□□ -1.97
LIMA1-206ENST00000550611 ARRDC5A6NEK1 342 aa2.72□□□□□ -1.97
LIMA1-206ENST00000550611 PRR32B1ATL7 298 aa2.72□□□□□ -1.97
LIMA1-206ENST00000550611 I3L521 148 aa2.72□□□□□ -1.97
LIMA1-206ENST00000550611 DLGAP1O14490 977 aa2.72□□□□□ -1.97
LIMA1-206ENST00000550611 SRSF10O75494 262 aaKnown RBP2.72□□□□□ -1.97
LIMA1-206ENST00000550611 DEDDO75618 318 aa2.72□□□□□ -1.97
LIMA1-206ENST00000550611 GAGE7O76087 117 aa2.72□□□□□ -1.97
LIMA1-206ENST00000550611 NXPH2O95156 264 aa2.72□□□□□ -1.97
LIMA1-206ENST00000550611 NRASP01111 189 aa2.72□□□□□ -1.97
LIMA1-206ENST00000550611 LYNP07948 512 aa2.72□□□□□ -1.97
LIMA1-206ENST00000550611 FRMD6-AS1P0C7T7 363 aa2.72□□□□□ -1.97
LIMA1-206ENST00000550611 FAM106CPP0CH98 169 aa2.72□□□□□ -1.97
LIMA1-206ENST00000550611 GAGE12FP0CL80 117 aa2.72□□□□□ -1.97
LIMA1-206ENST00000550611 GAGE12GP0CL81 117 aa2.72□□□□□ -1.97
LIMA1-206ENST00000550611 GAGE12IP0CL82 117 aa2.72□□□□□ -1.97
LIMA1-206ENST00000550611 CGB3P0DN86 165 aa2.72□□□□□ -1.97
LIMA1-206ENST00000550611 CGB7P0DN87 165 aa2.72□□□□□ -1.97
LIMA1-206ENST00000550611 RRM2P31350 389 aa2.72□□□□□ -1.97
LIMA1-206ENST00000550611 HAAOP46952 286 aa2.72□□□□□ -1.97
LIMA1-206ENST00000550611 EDDM3BP56851 147 aa2.72□□□□□ -1.97
LIMA1-206ENST00000550611 SSTP61278 116 aa2.72□□□□□ -1.97
LIMA1-206ENST00000550611 VBP1P61758 197 aa2.72□□□□□ -1.97
LIMA1-206ENST00000550611 RUNX1Q01196 453 aa2.72□□□□□ -1.97
LIMA1-206ENST00000550611 RIPPLY1Q0D2K3 151 aa2.72□□□□□ -1.97
LIMA1-206ENST00000550611 IL24Q13007 206 aa2.72□□□□□ -1.97
LIMA1-206ENST00000550611 GAGE1Q13065 139 aa2.72□□□□□ -1.97
LIMA1-206ENST00000550611 GAGE4Q13068 117 aa2.72□□□□□ -1.97
LIMA1-206ENST00000550611 HLA-DRB5Q30154 266 aa2.72□□□□□ -1.97
LIMA1-206ENST00000550611 DEFB136Q30KP8 78 aa2.72□□□□□ -1.97
LIMA1-206ENST00000550611 KRBOX4Q5JUW0 171 aa2.72□□□□□ -1.97
LIMA1-206ENST00000550611 CLVS2Q5SYC1 327 aa2.72□□□□□ -1.97
LIMA1-206ENST00000550611 UTF1Q5T230 341 aa2.72□□□□□ -1.97
LIMA1-206ENST00000550611 PLCXD3Q63HM9 321 aa2.72□□□□□ -1.97
LIMA1-206ENST00000550611 OR52W1Q6IF63 320 aa2.72□□□□□ -1.97
LIMA1-206ENST00000550611 CGB2Q6NT52 195 aa2.72□□□□□ -1.97
LIMA1-206ENST00000550611 DEGS2Q6QHC5 323 aa2.72□□□□□ -1.97
LIMA1-206ENST00000550611 HEPN1Q6WQI6 88 aa2.72□□□□□ -1.97
LIMA1-206ENST00000550611 HACD2Q6Y1H2 254 aa2.72□□□□□ -1.97
LIMA1-206ENST00000550611 ZNF600Q6ZNG1 722 aa2.72□□□□□ -1.97
LIMA1-206ENST00000550611 GDPD3Q7L5L3 318 aa2.72□□□□□ -1.97
LIMA1-206ENST00000550611 ANGPTL5Q86XS5 388 aa2.72□□□□□ -1.97
LIMA1-206ENST00000550611 STX12Q86Y82 276 aa2.72□□□□□ -1.97
LIMA1-206ENST00000550611 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.72□□□□□ -1.97
LIMA1-206ENST00000550611 ERI1Q8IV48 349 aaKnown RBP2.72□□□□□ -1.97
LIMA1-206ENST00000550611 DRAM1Q8N682 238 aa2.72□□□□□ -1.97
LIMA1-206ENST00000550611 RNF148Q8N7C7 305 aa2.72□□□□□ -1.97
LIMA1-206ENST00000550611 TPRX1Q8N7U7 411 aa2.72□□□□□ -1.97
LIMA1-206ENST00000550611 OR52L1Q8NGH7 329 aa2.72□□□□□ -1.97
LIMA1-206ENST00000550611 OR8U1Q8NH10 309 aa2.72□□□□□ -1.97
LIMA1-206ENST00000550611 ZNF596Q8TC21 504 aa2.72□□□□□ -1.97
LIMA1-206ENST00000550611 OR51E1Q8TCB6 317 aa2.72□□□□□ -1.97
LIMA1-206ENST00000550611 THEM6Q8WUY1 208 aa2.72□□□□□ -1.97
LIMA1-206ENST00000550611 CAPSLQ8WWF8 208 aa2.72□□□□□ -1.97
LIMA1-206ENST00000550611 FAM162AQ96A26 154 aa2.72□□□□□ -1.97
LIMA1-206ENST00000550611 CREB3L1Q96BA8 519 aa2.72□□□□□ -1.97
LIMA1-206ENST00000550611 CEP19Q96LK0 163 aa2.72□□□□□ -1.97
LIMA1-206ENST00000550611 INTS14Q96SY0 518 aa2.72□□□□□ -1.97
LIMA1-206ENST00000550611 GFI1Q99684 422 aa2.72□□□□□ -1.97
LIMA1-206ENST00000550611 BTBD10Q9BSF8 475 aa2.72□□□□□ -1.97
LIMA1-206ENST00000550611 TSSK6Q9BXA6 273 aa2.72□□□□□ -1.97
LIMA1-206ENST00000550611 PKIBQ9C010 78 aa2.72□□□□□ -1.97
LIMA1-206ENST00000550611 NIPAL2Q9H841 368 aa2.72□□□□□ -1.97
LIMA1-206ENST00000550611 LINC00574Q9H8X3 128 aa2.72□□□□□ -1.97
LIMA1-206ENST00000550611 MED20Q9H944 212 aa2.72□□□□□ -1.97
LIMA1-206ENST00000550611 ZNF286AQ9HBT8 521 aa2.72□□□□□ -1.97
LIMA1-206ENST00000550611 IL1RAPQ9NPH3 570 aa2.72□□□□□ -1.97
LIMA1-206ENST00000550611 CMC2Q9NRP2 79 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms