RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 SLC2A2P11168 524 aaPredicted RBP20.88■□□□□ 0.93
CPSF6-205ENST00000550075 HMGN3Q15651 99 aa20.88■□□□□ 0.93
CPSF6-205ENST00000550075 SHISA2Q6UWI4 295 aa20.88■□□□□ 0.93
CPSF6-205ENST00000550075 OR8H3Q8N146 312 aa20.88■□□□□ 0.93
CPSF6-205ENST00000550075 CAPSLQ8WWF8 208 aa20.88■□□□□ 0.93
CPSF6-205ENST00000550075 AKR1E2Q96JD6 320 aa20.88■□□□□ 0.93
CPSF6-205ENST00000550075 OCSTAMPQ9BR26 566 aa20.88■□□□□ 0.93
CPSF6-205ENST00000550075 CENPOQ9BU64 300 aa20.88■□□□□ 0.93
CPSF6-205ENST00000550075 OR2S2Q9NQN1 319 aa20.88■□□□□ 0.93
CPSF6-205ENST00000550075 RNF114Q9Y508 228 aa20.88■□□□□ 0.93
CPSF6-205ENST00000550075 TRBV6-6A0A0A6YYG2 114 aa20.87■□□□□ 0.93
CPSF6-205ENST00000550075 A0A0B4J203 849 aa20.87■□□□□ 0.93
CPSF6-205ENST00000550075 CHST1O43916 411 aa20.87■□□□□ 0.93
CPSF6-205ENST00000550075 AIREO43918 545 aa20.87■□□□□ 0.93
CPSF6-205ENST00000550075 RGS11O94810 467 aa20.87■□□□□ 0.93
CPSF6-205ENST00000550075 LPLP06858 475 aa20.87■□□□□ 0.93
CPSF6-205ENST00000550075 EFNB2P52799 333 aa20.87■□□□□ 0.93
CPSF6-205ENST00000550075 TMEM50BP56557 158 aa20.87■□□□□ 0.93
CPSF6-205ENST00000550075 HTD2P86397 168 aa20.87■□□□□ 0.93
CPSF6-205ENST00000550075 MXD1Q05195 221 aa20.87■□□□□ 0.93
CPSF6-205ENST00000550075 ZNF880Q6PDB4 577 aa20.87■□□□□ 0.93
CPSF6-205ENST00000550075 C16orf82Q7Z2V1 217 aa20.87■□□□□ 0.93
CPSF6-205ENST00000550075 TMEM219Q86XT9 240 aa20.87■□□□□ 0.93
CPSF6-205ENST00000550075 OR10V1Q8NGI7 309 aa20.87■□□□□ 0.93
CPSF6-205ENST00000550075 OR10R2Q8NGX6 335 aa20.87■□□□□ 0.93
CPSF6-205ENST00000550075 LINC01006Q8NI28 216 aa20.87■□□□□ 0.93
CPSF6-205ENST00000550075 CYYR1Q96J86 154 aa20.87■□□□□ 0.93
CPSF6-205ENST00000550075 CMSS1Q9BQ75 279 aaKnown RBP20.87■□□□□ 0.93
CPSF6-205ENST00000550075 A0A1W2PPE3 182 aa20.86■□□□□ 0.93
CPSF6-205ENST00000550075 HSD17B6O14756 317 aa20.86■□□□□ 0.93
CPSF6-205ENST00000550075 SCGNO76038 276 aa20.86■□□□□ 0.93
CPSF6-205ENST00000550075 CD3GP09693 182 aa20.86■□□□□ 0.93
CPSF6-205ENST00000550075 PLA2G7Q13093 441 aa20.86■□□□□ 0.93
CPSF6-205ENST00000550075 ARL6IP1Q15041 203 aa20.86■□□□□ 0.93
CPSF6-205ENST00000550075 YIPF6Q96EC8 236 aa20.86■□□□□ 0.93
CPSF6-205ENST00000550075 SCAND1P57086 179 aa20.85■□□□□ 0.93
CPSF6-205ENST00000550075 PLAC9Q5JTB6 97 aa20.85■□□□□ 0.93
CPSF6-205ENST00000550075 STEAP3Q658P3 488 aa20.85■□□□□ 0.93
CPSF6-205ENST00000550075 SLC25A48Q6ZT89 311 aaKnown RBP20.85■□□□□ 0.93
CPSF6-205ENST00000550075 OR2T6Q8NHC8 308 aa20.85■□□□□ 0.93
CPSF6-205ENST00000550075 WFDC12Q8WWY7 111 aa20.85■□□□□ 0.93
CPSF6-205ENST00000550075 ATG5Q9H1Y0 275 aa20.85■□□□□ 0.93
CPSF6-205ENST00000550075 RNF167Q9H6Y7 350 aa20.85■□□□□ 0.93
CPSF6-205ENST00000550075 GAPDHP04406 335 aaKnown RBP20.84■□□□□ 0.93
CPSF6-205ENST00000550075 HLA-DRB3P79483 266 aa20.84■□□□□ 0.93
CPSF6-205ENST00000550075 ZNF816Q0VGE8 651 aaPredicted RBP20.84■□□□□ 0.93
CPSF6-205ENST00000550075 C11orf88Q6PI97 169 aa20.84■□□□□ 0.93
CPSF6-205ENST00000550075 CCBE1Q6UXH8 406 aaPredicted RBP20.84■□□□□ 0.93
CPSF6-205ENST00000550075 ZNF439Q8NDP4 499 aa20.84■□□□□ 0.93
CPSF6-205ENST00000550075 IL1F10Q8WWZ1 152 aa20.84■□□□□ 0.93
CPSF6-205ENST00000550075 HDHD3Q9BSH5 251 aaPredicted RBP20.84■□□□□ 0.93
CPSF6-205ENST00000550075 A0A1W2PPI3 338 aa20.83■□□□□ 0.93
CPSF6-205ENST00000550075 SERPINE3A8MV23 424 aa20.83■□□□□ 0.93
CPSF6-205ENST00000550075 TIMM23O14925 209 aa20.83■□□□□ 0.93
CPSF6-205ENST00000550075 TXNL1O43396 289 aa20.83■□□□□ 0.93
CPSF6-205ENST00000550075 TMEM127O75204 238 aa20.83■□□□□ 0.93
CPSF6-205ENST00000550075 CLEC2LP0C7M8 214 aa20.83■□□□□ 0.93
CPSF6-205ENST00000550075 HIST1H1DP16402 221 aaKnown RBP20.83■□□□□ 0.93
CPSF6-205ENST00000550075 KIR2DS4P43632 304 aa20.83■□□□□ 0.93
CPSF6-205ENST00000550075 CROCCP3Q8IVE0 287 aa20.83■□□□□ 0.93
CPSF6-205ENST00000550075 LGALS14Q8TCE9 139 aa20.83■□□□□ 0.93
CPSF6-205ENST00000550075 ABHD14AQ9BUJ0 271 aa20.83■□□□□ 0.93
CPSF6-205ENST00000550075 ETV7Q9Y603 341 aa20.83■□□□□ 0.93
CPSF6-205ENST00000550075 RAB27BO00194 218 aa20.82■□□□□ 0.92
CPSF6-205ENST00000550075 YPEL1O60688 119 aa20.82■□□□□ 0.92
CPSF6-205ENST00000550075 FAM106CPP0CH98 169 aa20.82■□□□□ 0.92
CPSF6-205ENST00000550075 SNRPBP14678 240 aaKnown RBP20.82■□□□□ 0.92
CPSF6-205ENST00000550075 PPP1CCP36873 323 aaKnown RBP20.82■□□□□ 0.92
CPSF6-205ENST00000550075 GNMTQ14749 295 aa20.82■□□□□ 0.92
CPSF6-205ENST00000550075 MOGAT2Q3SYC2 334 aa20.82■□□□□ 0.92
CPSF6-205ENST00000550075 MORN2Q502X0 79 aa20.82■□□□□ 0.92
CPSF6-205ENST00000550075 LY6G6FQ5SQ64 297 aa20.82■□□□□ 0.92
CPSF6-205ENST00000550075 OR52L2PQ8NGH6 319 aa20.82■□□□□ 0.92
CPSF6-205ENST00000550075 OR56B4Q8NH76 319 aa20.82■□□□□ 0.92
CPSF6-205ENST00000550075 YPEL2Q96QA6 119 aa20.82■□□□□ 0.92
CPSF6-205ENST00000550075 PRSS22Q9GZN4 317 aa20.82■□□□□ 0.92
CPSF6-205ENST00000550075 Q9N2K0 584 aa20.82■□□□□ 0.92
CPSF6-205ENST00000550075 A0A075B6Q4 140 aa20.81■□□□□ 0.92
CPSF6-205ENST00000550075 MFNGO00587 321 aa20.81■□□□□ 0.92
CPSF6-205ENST00000550075 SLC31A2O15432 143 aa20.81■□□□□ 0.92
CPSF6-205ENST00000550075 CD24P25063 80 aa20.81■□□□□ 0.92
CPSF6-205ENST00000550075 ZNF137PP52743 207 aa20.81■□□□□ 0.92
CPSF6-205ENST00000550075 IDNKQ5T6J7 187 aa20.81■□□□□ 0.92
CPSF6-205ENST00000550075 FAM53AQ6NSI3 398 aaPredicted RBP20.81■□□□□ 0.92
CPSF6-205ENST00000550075 THNSL2Q86YJ6 484 aa20.81■□□□□ 0.92
CPSF6-205ENST00000550075 DRAM1Q8N682 238 aa20.81■□□□□ 0.92
CPSF6-205ENST00000550075 OR2AK2Q8NG84 335 aa20.81■□□□□ 0.92
CPSF6-205ENST00000550075 SLC25A33Q9BSK2 321 aa20.81■□□□□ 0.92
CPSF6-205ENST00000550075 OR2F2O95006 317 aa20.8■□□□□ 0.92
CPSF6-205ENST00000550075 PROK1P58294 105 aa20.8■□□□□ 0.92
CPSF6-205ENST00000550075 ARFRP1Q13795 201 aa20.8■□□□□ 0.92
CPSF6-205ENST00000550075 ARSJQ5FYB0 599 aaPredicted RBP20.8■□□□□ 0.92
CPSF6-205ENST00000550075 CT45A1Q5HYN5 189 aa20.8■□□□□ 0.92
CPSF6-205ENST00000550075 CT45A3Q8NHU0 189 aa20.8■□□□□ 0.92
CPSF6-205ENST00000550075 PHF21AQ96BD5 680 aa20.8■□□□□ 0.92
CPSF6-205ENST00000550075 MRPS26Q9BYN8 205 aaKnown RBP20.8■□□□□ 0.92
CPSF6-205ENST00000550075 RHBDL2Q9NX52 303 aa20.8■□□□□ 0.92
CPSF6-205ENST00000550075 IGHV1-3A0A0C4DH29 117 aa20.79■□□□□ 0.92
CPSF6-205ENST00000550075 M0QZK8 103 aa20.79■□□□□ 0.92
CPSF6-205ENST00000550075 SNRNP70P08621 437 aaKnown RBP20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms