RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 FAM90A7PA6NKC0 464 aa9.58□□□□□ -0.88
DDX54-206ENST00000549271 FAM90A23PA8MXZ1 464 aa9.58□□□□□ -0.88
DDX54-206ENST00000549271 CRTAPO75718 401 aaPredicted RBP9.58□□□□□ -0.88
DDX54-206ENST00000549271 UCHL1P09936 223 aa9.58□□□□□ -0.88
DDX54-206ENST00000549271 SRMP19623 302 aa9.58□□□□□ -0.88
DDX54-206ENST00000549271 MAP2K4P45985 399 aa9.58□□□□□ -0.88
DDX54-206ENST00000549271 LUMP51884 338 aaPredicted RBP9.58□□□□□ -0.88
DDX54-206ENST00000549271 RPL23AP62750 156 aaKnown RBP9.58□□□□□ -0.88
DDX54-206ENST00000549271 DIAPH2-AS1Q14236 149 aa9.58□□□□□ -0.88
DDX54-206ENST00000549271 RBM39Q14498 530 aaKnown RBP9.58□□□□□ -0.88
DDX54-206ENST00000549271 RAB12Q6IQ22 244 aa9.58□□□□□ -0.88
DDX54-206ENST00000549271 C8orf86Q6ZUL3 223 aa9.58□□□□□ -0.88
DDX54-206ENST00000549271 PRSS48Q7RTY5 328 aa9.58□□□□□ -0.88
DDX54-206ENST00000549271 OR8H3Q8N146 312 aa9.58□□□□□ -0.88
DDX54-206ENST00000549271 COMMD1Q8N668 190 aa9.58□□□□□ -0.88
DDX54-206ENST00000549271 NKAIN3Q8N8D7 197 aa9.58□□□□□ -0.88
DDX54-206ENST00000549271 C5orf56Q8N8D9 126 aa9.58□□□□□ -0.88
DDX54-206ENST00000549271 UBALD1Q8TB05 177 aa9.58□□□□□ -0.88
DDX54-206ENST00000549271 TOMM40LQ969M1 308 aa9.58□□□□□ -0.88
DDX54-206ENST00000549271 ARL11Q969Q4 196 aa9.58□□□□□ -0.88
DDX54-206ENST00000549271 TMEM203Q969S6 136 aa9.58□□□□□ -0.88
DDX54-206ENST00000549271 SPACA1Q9HBV2 294 aa9.58□□□□□ -0.88
DDX54-206ENST00000549271 PEX16Q9Y5Y5 336 aa9.58□□□□□ -0.88
DDX54-206ENST00000549271 SORL1Q92673 2214 aa9.58□□□□□ -0.88
DDX54-206ENST00000549271 A0A1W2PPE3 182 aa9.57□□□□□ -0.88
DDX54-206ENST00000549271 A0A1W2PPI3 338 aa9.57□□□□□ -0.88
DDX54-206ENST00000549271 MCRIP1C9JLW8 97 aa9.57□□□□□ -0.88
DDX54-206ENST00000549271 ORC5O43913 435 aa9.57□□□□□ -0.88
DDX54-206ENST00000549271 ATP6V1G2O95670 118 aa9.57□□□□□ -0.88
DDX54-206ENST00000549271 IGHG2P01859 326 aa9.57□□□□□ -0.88
DDX54-206ENST00000549271 GLAP06280 429 aa9.57□□□□□ -0.88
DDX54-206ENST00000549271 SNRNP70P08621 437 aaKnown RBP9.57□□□□□ -0.88
DDX54-206ENST00000549271 HSMCR30P0CW71 290 aa9.57□□□□□ -0.88
DDX54-206ENST00000549271 CPEP16870 476 aa9.57□□□□□ -0.88
DDX54-206ENST00000549271 FUT3P21217 361 aa9.57□□□□□ -0.88
DDX54-206ENST00000549271 HSPA13P48723 471 aa9.57□□□□□ -0.88
DDX54-206ENST00000549271 RAB7AP51149 207 aa9.57□□□□□ -0.88
DDX54-206ENST00000549271 RPS25P62851 125 aaKnown RBP9.57□□□□□ -0.88
DDX54-206ENST00000549271 QRFPP83859 136 aa9.57□□□□□ -0.88
DDX54-206ENST00000549271 MADCAM1Q13477 382 aa9.57□□□□□ -0.88
DDX54-206ENST00000549271 C9orf152Q5JTZ5 239 aa9.57□□□□□ -0.88
DDX54-206ENST00000549271 OR10K2Q6IF99 312 aa9.57□□□□□ -0.88
DDX54-206ENST00000549271 C18orf65Q6ZTR6 163 aa9.57□□□□□ -0.88
DDX54-206ENST00000549271 OR2W3Q7Z3T1 314 aa9.57□□□□□ -0.88
DDX54-206ENST00000549271 OR52M1Q8NGK5 317 aa9.57□□□□□ -0.88
DDX54-206ENST00000549271 NEK7Q8TDX7 302 aa9.57□□□□□ -0.88
DDX54-206ENST00000549271 UFD1Q92890 307 aa9.57□□□□□ -0.88
DDX54-206ENST00000549271 FAM46BQ96A09 425 aa9.57□□□□□ -0.88
DDX54-206ENST00000549271 CNBD2Q96M20 576 aa9.57□□□□□ -0.88
DDX54-206ENST00000549271 GFI1Q99684 422 aa9.57□□□□□ -0.88
DDX54-206ENST00000549271 GFOD1Q9NXC2 390 aa9.57□□□□□ -0.88
DDX54-206ENST00000549271 GHRLQ9UBU3 117 aa9.57□□□□□ -0.88
DDX54-206ENST00000549271 SMAD5-AS1Q9Y6J3 95 aa9.57□□□□□ -0.88
DDX54-206ENST00000549271 UBE2QL1A1L167 161 aa9.56□□□□□ -0.88
DDX54-206ENST00000549271 AIPO00170 330 aa9.56□□□□□ -0.88
DDX54-206ENST00000549271 ECI1P42126 302 aa9.56□□□□□ -0.88
DDX54-206ENST00000549271 GNG10P50151 68 aa9.56□□□□□ -0.88
DDX54-206ENST00000549271 MLLT11Q13015 90 aaPredicted RBP9.56□□□□□ -0.88
DDX54-206ENST00000549271 EBI3Q14213 229 aa9.56□□□□□ -0.88
DDX54-206ENST00000549271 HSD17B12Q53GQ0 312 aa9.56□□□□□ -0.88
DDX54-206ENST00000549271 RBM48Q5RL73 367 aaKnown RBP9.56□□□□□ -0.88
DDX54-206ENST00000549271 SYT6Q5T7P8 510 aaPredicted RBP9.56□□□□□ -0.88
DDX54-206ENST00000549271 GLT8D1Q68CQ7 371 aa9.56□□□□□ -0.88
DDX54-206ENST00000549271 C5orf24Q7Z6I8 188 aa9.56□□□□□ -0.88
DDX54-206ENST00000549271 ZNF329Q86UD4 541 aa9.56□□□□□ -0.88
DDX54-206ENST00000549271 LINC00311Q8N616 119 aa9.56□□□□□ -0.88
DDX54-206ENST00000549271 DRAM1Q8N682 238 aa9.56□□□□□ -0.88
DDX54-206ENST00000549271 OR4K15Q8NH41 348 aa9.56□□□□□ -0.88
DDX54-206ENST00000549271 OR56B4Q8NH76 319 aa9.56□□□□□ -0.88
DDX54-206ENST00000549271 MGLLQ99685 303 aa9.56□□□□□ -0.88
DDX54-206ENST00000549271 CCDC90BQ9GZT6 254 aa9.56□□□□□ -0.88
DDX54-206ENST00000549271 KCNK15Q9H427 330 aa9.56□□□□□ -0.88
DDX54-206ENST00000549271 EDA2RQ9HAV5 297 aa9.56□□□□□ -0.88
DDX54-206ENST00000549271 ETAA1Q9NY74 926 aa9.56□□□□□ -0.88
DDX54-206ENST00000549271 SCOCQ9UIL1 159 aa9.56□□□□□ -0.88
DDX54-206ENST00000549271 RAB26Q9ULW5 256 aa9.56□□□□□ -0.88
DDX54-206ENST00000549271 IGHV3-43A0A0B4J1X8 118 aa9.55□□□□□ -0.88
DDX54-206ENST00000549271 C12orf77C9JDV5 145 aa9.55□□□□□ -0.88
DDX54-206ENST00000549271 SLC22A1O15245 554 aa9.55□□□□□ -0.88
DDX54-206ENST00000549271 PDCD6O75340 191 aa9.55□□□□□ -0.88
DDX54-206ENST00000549271 UBBP0CG47 229 aa9.55□□□□□ -0.88
DDX54-206ENST00000549271 IGHV3-43DP0DP04 118 aa9.55□□□□□ -0.88
DDX54-206ENST00000549271 TMEM11P17152 192 aa9.55□□□□□ -0.88
DDX54-206ENST00000549271 RCC1P18754 421 aaPredicted RBP9.55□□□□□ -0.88
DDX54-206ENST00000549271 HTR2CP28335 458 aa9.55□□□□□ -0.88
DDX54-206ENST00000549271 SLC35B1P78383 322 aa9.55□□□□□ -0.88
DDX54-206ENST00000549271 FABP5Q01469 135 aa9.55□□□□□ -0.88
DDX54-206ENST00000549271 ZNF816Q0VGE8 651 aaPredicted RBP9.55□□□□□ -0.88
DDX54-206ENST00000549271 UNC119Q13432 240 aa9.55□□□□□ -0.88
DDX54-206ENST00000549271 TRAM1Q15629 374 aa9.55□□□□□ -0.88
DDX54-206ENST00000549271 C9orf66Q5T8R8 295 aa9.55□□□□□ -0.88
DDX54-206ENST00000549271 C8orf31Q8N9H6 132 aa9.55□□□□□ -0.88
DDX54-206ENST00000549271 OR1L1Q8NH94 360 aa9.55□□□□□ -0.88
DDX54-206ENST00000549271 NOL4LQ96MY1 436 aaPredicted RBP9.55□□□□□ -0.88
DDX54-206ENST00000549271 TRAPPC2LQ9UL33 140 aa9.55□□□□□ -0.88
DDX54-206ENST00000549271 ZNF256Q9Y2P7 627 aaPredicted RBP9.55□□□□□ -0.88
DDX54-206ENST00000549271 RBMY1BA6NDE4 496 aaKnown RBP9.54□□□□□ -0.88
DDX54-206ENST00000549271 RBMY1EA6NEQ0 496 aaKnown RBP9.54□□□□□ -0.88
DDX54-206ENST00000549271 SERPINE3A8MV23 424 aa9.54□□□□□ -0.88
DDX54-206ENST00000549271 TMEM14DPA8MWL7 114 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms