RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 POM121Q96HA1 1249 aa11.71□□□□□ -0.54
HDAC7-228ENST00000548938 KIR2DS1A0A191URI9 304 aa11.7□□□□□ -0.54
HDAC7-228ENST00000548938 ZNF705GA8MUZ8 300 aaPredicted RBP11.7□□□□□ -0.54
HDAC7-228ENST00000548938 SERPINE2P07093 398 aa11.7□□□□□ -0.54
HDAC7-228ENST00000548938 KIR2DS4P43632 304 aa11.7□□□□□ -0.54
HDAC7-228ENST00000548938 NUBP1P53384 320 aa11.7□□□□□ -0.54
HDAC7-228ENST00000548938 RAC1P63000 192 aa11.7□□□□□ -0.54
HDAC7-228ENST00000548938 KIR2DS1Q14954 304 aa11.7□□□□□ -0.54
HDAC7-228ENST00000548938 PCSK4Q6UW60 755 aa11.7□□□□□ -0.54
HDAC7-228ENST00000548938 Q8NFD4 153 aa11.7□□□□□ -0.54
HDAC7-228ENST00000548938 OR56B2PQ8NGI1 322 aa11.7□□□□□ -0.54
HDAC7-228ENST00000548938 HIST1H2AAQ96QV6 131 aa11.7□□□□□ -0.54
HDAC7-228ENST00000548938 ATP23Q9Y6H3 246 aa11.7□□□□□ -0.54
HDAC7-228ENST00000548938 FAM90A10PA6NDY2 464 aa11.7□□□□□ -0.54
HDAC7-228ENST00000548938 FAM90A18PA6NE21 464 aa11.7□□□□□ -0.54
HDAC7-228ENST00000548938 FAM90A16PA6NEW6 464 aa11.7□□□□□ -0.54
HDAC7-228ENST00000548938 FAM90A20PA6NIJ5 464 aa11.7□□□□□ -0.54
HDAC7-228ENST00000548938 FAM90A8PA6NJQ4 464 aa11.7□□□□□ -0.54
HDAC7-228ENST00000548938 FAM90A7PA6NKC0 464 aa11.7□□□□□ -0.54
HDAC7-228ENST00000548938 FAM90A22PA8MWA6 464 aa11.7□□□□□ -0.54
HDAC7-228ENST00000548938 FAM90A12PA8MX19 464 aa11.7□□□□□ -0.54
HDAC7-228ENST00000548938 FAM90A5PA8MXJ8 464 aa11.7□□□□□ -0.54
HDAC7-228ENST00000548938 FAM90A23PA8MXZ1 464 aa11.7□□□□□ -0.54
HDAC7-228ENST00000548938 PATE3B3GLJ2 98 aa11.7□□□□□ -0.54
HDAC7-228ENST00000548938 GDF9O60383 454 aa11.7□□□□□ -0.54
HDAC7-228ENST00000548938 FAM90A15PP0C7V4 464 aa11.7□□□□□ -0.54
HDAC7-228ENST00000548938 FAM90A13PP0C7W8 464 aa11.7□□□□□ -0.54
HDAC7-228ENST00000548938 FAM90A14PP0C7W9 464 aa11.7□□□□□ -0.54
HDAC7-228ENST00000548938 FAM90A24PP0C7X0 464 aa11.7□□□□□ -0.54
HDAC7-228ENST00000548938 SPINK2P20155 84 aa11.7□□□□□ -0.54
HDAC7-228ENST00000548938 GPM6AP51674 278 aa11.7□□□□□ -0.54
HDAC7-228ENST00000548938 CLDN15P56746 228 aa11.7□□□□□ -0.54
HDAC7-228ENST00000548938 FGF12P61328 243 aa11.7□□□□□ -0.54
HDAC7-228ENST00000548938 HNF4GQ14541 408 aa11.7□□□□□ -0.54
HDAC7-228ENST00000548938 C20orf204Q6ZNR8 217 aa11.7□□□□□ -0.54
HDAC7-228ENST00000548938 AAED1Q7RTV5 226 aa11.7□□□□□ -0.54
HDAC7-228ENST00000548938 RAB24Q969Q5 203 aa11.7□□□□□ -0.54
HDAC7-228ENST00000548938 LURAP1Q96LR2 239 aa11.7□□□□□ -0.54
HDAC7-228ENST00000548938 TECTBQ96PL2 329 aa11.7□□□□□ -0.54
HDAC7-228ENST00000548938 PSMG3Q9BT73 122 aaPredicted RBP11.7□□□□□ -0.54
HDAC7-228ENST00000548938 NDUFAF3Q9BU61 184 aa11.7□□□□□ -0.54
HDAC7-228ENST00000548938 ELOVL1Q9BW60 279 aa11.7□□□□□ -0.54
HDAC7-228ENST00000548938 ACTR3CQ9C0K3 210 aaPredicted RBP11.7□□□□□ -0.54
HDAC7-228ENST00000548938 NAT8Q9UHE5 227 aa11.7□□□□□ -0.54
HDAC7-228ENST00000548938 TP53TG5Q9Y2B4 290 aa11.7□□□□□ -0.54
HDAC7-228ENST00000548938 IGKV1-39P01597 117 aa11.69□□□□□ -0.54
HDAC7-228ENST00000548938 IGKV1D-39P04432 117 aa11.69□□□□□ -0.54
HDAC7-228ENST00000548938 CCL7P80098 99 aa11.69□□□□□ -0.54
HDAC7-228ENST00000548938 RTP5Q14D33 572 aa11.69□□□□□ -0.54
HDAC7-228ENST00000548938 SRSF7Q16629 238 aaKnown RBP eCLIP11.69□□□□□ -0.547e-21■■■■■ 43.1
HDAC7-228ENST00000548938 SLC23A3Q6PIS1 610 aa11.69□□□□□ -0.54
HDAC7-228ENST00000548938 CYP2G1PQ6ZSU1 146 aa11.69□□□□□ -0.54
HDAC7-228ENST00000548938 OR1K1Q8NGR3 316 aa11.69□□□□□ -0.54
HDAC7-228ENST00000548938 RPUSD4Q96CM3 377 aaKnown RBP11.69□□□□□ -0.54
HDAC7-228ENST00000548938 PYGO2Q9BRQ0 406 aa11.69□□□□□ -0.54
HDAC7-228ENST00000548938 SF3B5Q9BWJ5 86 aaKnown RBP11.69□□□□□ -0.54
HDAC7-228ENST00000548938 PSENENQ9NZ42 101 aa11.69□□□□□ -0.54
HDAC7-228ENST00000548938 TNRC6BQ9UPQ9 1833 aaKnown RBP11.69□□□□□ -0.54
HDAC7-228ENST00000548938 ZNF716A6NP11 495 aa11.69□□□□□ -0.54
HDAC7-228ENST00000548938 C3orf80F5H4A9 247 aa11.69□□□□□ -0.54
HDAC7-228ENST00000548938 SYNGR2O43760 224 aa11.69□□□□□ -0.54
HDAC7-228ENST00000548938 ZNF737O75373 536 aa11.69□□□□□ -0.54
HDAC7-228ENST00000548938 LBHQ53QV2 105 aaPredicted RBP11.69□□□□□ -0.54
HDAC7-228ENST00000548938 TMEM41BQ5BJD5 291 aa11.69□□□□□ -0.54
HDAC7-228ENST00000548938 YRDCQ86U90 279 aaKnown RBP11.69□□□□□ -0.54
HDAC7-228ENST00000548938 CPEB3Q8NE35 698 aaKnown RBP11.69□□□□□ -0.54
HDAC7-228ENST00000548938 MTCH1Q9NZJ7 389 aa11.69□□□□□ -0.54
HDAC7-228ENST00000548938 PRSS50Q9UI38 385 aa11.69□□□□□ -0.54
HDAC7-228ENST00000548938 RNF150Q9ULK6 438 aa11.69□□□□□ -0.54
HDAC7-228ENST00000548938 EREGO14944 169 aa11.68□□□□□ -0.54
HDAC7-228ENST00000548938 HMGB3O15347 200 aaKnown RBP11.68□□□□□ -0.54
HDAC7-228ENST00000548938 TOX3O15405 576 aaPredicted RBP11.68□□□□□ -0.54
HDAC7-228ENST00000548938 IFNA1P01562 189 aa11.68□□□□□ -0.54
HDAC7-228ENST00000548938 RAC3P60763 192 aa11.68□□□□□ -0.54
HDAC7-228ENST00000548938 SPCS3P61009 180 aa11.68□□□□□ -0.54
HDAC7-228ENST00000548938 PRDX4Q13162 271 aa11.68□□□□□ -0.54
HDAC7-228ENST00000548938 LRRC75BQ2VPJ9 315 aa11.68□□□□□ -0.54
HDAC7-228ENST00000548938 MRPL14Q6P1L8 145 aaKnown RBP11.68□□□□□ -0.54
HDAC7-228ENST00000548938 ZNF66Q6ZN08 573 aa11.68□□□□□ -0.54
HDAC7-228ENST00000548938 OR51G1Q8NGK1 321 aa11.68□□□□□ -0.54
HDAC7-228ENST00000548938 SPSB4Q96A44 273 aa11.68□□□□□ -0.54
HDAC7-228ENST00000548938 NOL4LQ96MY1 436 aaPredicted RBP11.68□□□□□ -0.54
HDAC7-228ENST00000548938 DDA1Q9BW61 102 aa11.68□□□□□ -0.54
HDAC7-228ENST00000548938 FREM2Q5SZK8 3169 aa11.68□□□□□ -0.54
HDAC7-228ENST00000548938 LRRC3CA6NJW4 275 aa11.68□□□□□ -0.54
HDAC7-228ENST00000548938 CYTIPO60759 359 aa11.68□□□□□ -0.54
HDAC7-228ENST00000548938 IGKV1D-33P01593 117 aa11.68□□□□□ -0.54
HDAC7-228ENST00000548938 IGKV1-33P01594 117 aa11.68□□□□□ -0.54
HDAC7-228ENST00000548938 IGHV3-9P01782 118 aa11.68□□□□□ -0.54
HDAC7-228ENST00000548938 CEACAM6P40199 344 aa11.68□□□□□ -0.54
HDAC7-228ENST00000548938 GALR1P47211 349 aa11.68□□□□□ -0.54
HDAC7-228ENST00000548938 RPL23P62829 140 aaKnown RBP11.68□□□□□ -0.54
HDAC7-228ENST00000548938 MEF2BQ02080 365 aaPredicted RBP11.68□□□□□ -0.54
HDAC7-228ENST00000548938 TMEM241Q24JQ0 296 aa11.68□□□□□ -0.54
HDAC7-228ENST00000548938 BSXQ3C1V8 233 aa11.68□□□□□ -0.54
HDAC7-228ENST00000548938 COA6Q5JTJ3 125 aaKnown RBP11.68□□□□□ -0.54
HDAC7-228ENST00000548938 ZNF324BQ6AW86 544 aaPredicted RBP11.68□□□□□ -0.54
HDAC7-228ENST00000548938 MYPOPQ86VE0 399 aaPredicted RBP11.68□□□□□ -0.54
HDAC7-228ENST00000548938 MRPL30Q8TCC3 161 aaKnown RBP11.68□□□□□ -0.54
HDAC7-228ENST00000548938 LHX4Q969G2 390 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms