RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 TNRC6BQ9UPQ9 1833 aaKnown RBP12.02□□□□□ -0.49
RAPGEF3-218ENST00000548919 A0A1B0GU03 582 aa12.02□□□□□ -0.49
RAPGEF3-218ENST00000548919 IGLV2-14P01704 120 aa12.02□□□□□ -0.49
RAPGEF3-218ENST00000548919 CTXN2P0C2S0 81 aa12.02□□□□□ -0.49
RAPGEF3-218ENST00000548919 BEND4Q6ZU67 534 aa12.02□□□□□ -0.49
RAPGEF3-218ENST00000548919 MED12LQ86YW9 2145 aa12.02□□□□□ -0.49
RAPGEF3-218ENST00000548919 SAXO1Q8IYX7 474 aa12.02□□□□□ -0.49
RAPGEF3-218ENST00000548919 LRFN1Q9P244 771 aa12.02□□□□□ -0.49
RAPGEF3-218ENST00000548919 OR14J1Q9UGF5 321 aa12.02□□□□□ -0.49
RAPGEF3-218ENST00000548919 PILRBQ9UKJ0 227 aa12.02□□□□□ -0.49
RAPGEF3-218ENST00000548919 TRAV1-1A0A0B4J248 108 aa12.01□□□□□ -0.49
RAPGEF3-218ENST00000548919 CEBPZOSA8MTT3 80 aa12.01□□□□□ -0.49
RAPGEF3-218ENST00000548919 IGKV1-5P01602 117 aa12.01□□□□□ -0.49
RAPGEF3-218ENST00000548919 PGA5P0DJD9 388 aa12.01□□□□□ -0.49
RAPGEF3-218ENST00000548919 C1orf87Q8N0U7 546 aa12.01□□□□□ -0.49
RAPGEF3-218ENST00000548919 CA5BP1Q8WTZ4 195 aa12.01□□□□□ -0.49
RAPGEF3-218ENST00000548919 RAB40CQ96S21 281 aa12.01□□□□□ -0.49
RAPGEF3-218ENST00000548919 PLK3Q9H4B4 646 aa12.01□□□□□ -0.49
RAPGEF3-218ENST00000548919 PSENENQ9NZ42 101 aa12.01□□□□□ -0.49
RAPGEF3-218ENST00000548919 CISD1Q9NZ45 108 aaKnown RBP12.01□□□□□ -0.49
RAPGEF3-218ENST00000548919 GATCO43716 136 aaKnown RBP12.01□□□□□ -0.49
RAPGEF3-218ENST00000548919 SYNGR2O43760 224 aa12.01□□□□□ -0.49
RAPGEF3-218ENST00000548919 CD55P08174 381 aa12.01□□□□□ -0.49
RAPGEF3-218ENST00000548919 GPX4P36969 197 aaPredicted RBP12.01□□□□□ -0.49
RAPGEF3-218ENST00000548919 GAMTQ14353 236 aa12.01□□□□□ -0.49
RAPGEF3-218ENST00000548919 RNPS1Q15287 305 aaKnown RBP12.01□□□□□ -0.49
RAPGEF3-218ENST00000548919 ZNF525Q8N782 197 aa12.01□□□□□ -0.49
RAPGEF3-218ENST00000548919 SNX22Q96L94 193 aa12.01□□□□□ -0.49
RAPGEF3-218ENST00000548919 HIST1H2AAQ96QV6 131 aa12.01□□□□□ -0.49
RAPGEF3-218ENST00000548919 PCSK5Q92824 1860 aa12.01□□□□□ -0.49
RAPGEF3-218ENST00000548919 IGHV3-64DA0A0J9YX35 117 aa12.01□□□□□ -0.49
RAPGEF3-218ENST00000548919 CD300LBA8K4G0 201 aa12.01□□□□□ -0.49
RAPGEF3-218ENST00000548919 HMGB3O15347 200 aaKnown RBP12.01□□□□□ -0.49
RAPGEF3-218ENST00000548919 S100GP29377 79 aa12.01□□□□□ -0.49
RAPGEF3-218ENST00000548919 SPANXN5Q5MJ07 72 aa12.01□□□□□ -0.49
RAPGEF3-218ENST00000548919 APOBEC3DQ96AK3 386 aaPredicted RBP12.01□□□□□ -0.49
RAPGEF3-218ENST00000548919 POM121Q96HA1 1249 aa12.01□□□□□ -0.49
RAPGEF3-218ENST00000548919 HES7Q9BYE0 225 aa12.01□□□□□ -0.49
RAPGEF3-218ENST00000548919 HIPK2Q9H2X6 1198 aa12.01□□□□□ -0.49
RAPGEF3-218ENST00000548919 DLL3Q9NYJ7 618 aa12.01□□□□□ -0.49
RAPGEF3-218ENST00000548919 AHCTF1Q8WYP5 2266 aa12□□□□□ -0.49
RAPGEF3-218ENST00000548919 TNRC6AQ8NDV7 1962 aaKnown RBP12□□□□□ -0.49
RAPGEF3-218ENST00000548919 CLDN34H7C241 214 aa12□□□□□ -0.49
RAPGEF3-218ENST00000548919 CYB561P49447 251 aa12□□□□□ -0.49
RAPGEF3-218ENST00000548919 DEFA6Q01524 100 aa12□□□□□ -0.49
RAPGEF3-218ENST00000548919 SPATA46Q5T0L3 261 aa12□□□□□ -0.49
RAPGEF3-218ENST00000548919 LILRB2Q8N423 598 aa12□□□□□ -0.49
RAPGEF3-218ENST00000548919 OR10V1Q8NGI7 309 aa12□□□□□ -0.49
RAPGEF3-218ENST00000548919 OR10G4Q8NGN3 311 aa12□□□□□ -0.49
RAPGEF3-218ENST00000548919 S100PBPQ96BU1 408 aa12□□□□□ -0.49
RAPGEF3-218ENST00000548919 RBKSQ9H477 322 aa12□□□□□ -0.49
RAPGEF3-218ENST00000548919 SDF2L1Q9HCN8 221 aa12□□□□□ -0.49
RAPGEF3-218ENST00000548919 KCNS2Q9ULS6 477 aa12□□□□□ -0.49
RAPGEF3-218ENST00000548919 SIT1Q9Y3P8 196 aa12□□□□□ -0.49
RAPGEF3-218ENST00000548919 OR5H1A6NKK0 313 aa12□□□□□ -0.49
RAPGEF3-218ENST00000548919 B4DEV8 164 aa12□□□□□ -0.49
RAPGEF3-218ENST00000548919 CYB5R3P00387 301 aaPredicted RBP12□□□□□ -0.49
RAPGEF3-218ENST00000548919 ZNF600Q6ZNG1 722 aa12□□□□□ -0.49
RAPGEF3-218ENST00000548919 VASH2Q86V25 355 aa12□□□□□ -0.49
RAPGEF3-218ENST00000548919 FAM58AQ8N1B3 248 aa12□□□□□ -0.49
RAPGEF3-218ENST00000548919 OR5A2Q8NGI9 324 aa12□□□□□ -0.49
RAPGEF3-218ENST00000548919 OR5P3Q8WZ94 311 aa12□□□□□ -0.49
RAPGEF3-218ENST00000548919 RBM7Q9Y580 266 aaKnown RBP12□□□□□ -0.49
RAPGEF3-218ENST00000548919 TNRC18O15417 2968 aaPredicted RBP11.99□□□□□ -0.49
RAPGEF3-218ENST00000548919 DSPP15924 2871 aaKnown RBP11.99□□□□□ -0.49
RAPGEF3-218ENST00000548919 NTN3O00634 580 aaPredicted RBP11.99□□□□□ -0.49
RAPGEF3-218ENST00000548919 WDR1O75083 606 aa11.99□□□□□ -0.49
RAPGEF3-218ENST00000548919 CA6P23280 308 aa11.99□□□□□ -0.49
RAPGEF3-218ENST00000548919 MDH2P40926 338 aaKnown RBP11.99□□□□□ -0.49
RAPGEF3-218ENST00000548919 TESK1Q15569 626 aa11.99□□□□□ -0.49
RAPGEF3-218ENST00000548919 WDR25Q64LD2 544 aaPredicted RBP11.99□□□□□ -0.49
RAPGEF3-218ENST00000548919 UNQ6494/PRO21346Q6UXR6 183 aa11.99□□□□□ -0.49
RAPGEF3-218ENST00000548919 NECAP1Q8NC96 275 aa11.99□□□□□ -0.49
RAPGEF3-218ENST00000548919 TMEM45BQ96B21 275 aa11.99□□□□□ -0.49
RAPGEF3-218ENST00000548919 OR4C12Q96R67 309 aa11.99□□□□□ -0.49
RAPGEF3-218ENST00000548919 CABLES2Q9BTV7 478 aa11.99□□□□□ -0.49
RAPGEF3-218ENST00000548919 PRO1933Q9H354 126 aa11.99□□□□□ -0.49
RAPGEF3-218ENST00000548919 OPA3Q9H6K4 179 aa11.99□□□□□ -0.49
RAPGEF3-218ENST00000548919 DOCK11Q5JSL3 2073 aa11.99□□□□□ -0.49
RAPGEF3-218ENST00000548919 UBE2L5PA0A1B0GUS4 154 aa11.99□□□□□ -0.49
RAPGEF3-218ENST00000548919 HIST1H1BP16401 226 aaKnown RBP11.99□□□□□ -0.49
RAPGEF3-218ENST00000548919 CLN3Q13286 438 aa11.99□□□□□ -0.49
RAPGEF3-218ENST00000548919 ZNF585BQ52M93 769 aa11.99□□□□□ -0.49
RAPGEF3-218ENST00000548919 PMS2CLQ68D20 193 aa11.99□□□□□ -0.49
RAPGEF3-218ENST00000548919 TCEAL6Q6IPX3 200 aa11.99□□□□□ -0.49
RAPGEF3-218ENST00000548919 OR13D1Q8NGV5 346 aa11.99□□□□□ -0.49
RAPGEF3-218ENST00000548919 MAFAQ8NHW3 353 aaPredicted RBP11.99□□□□□ -0.49
RAPGEF3-218ENST00000548919 GFOD1Q9NXC2 390 aa11.99□□□□□ -0.49
RAPGEF3-218ENST00000548919 A0A1W2PR80 420 aa11.98□□□□□ -0.49
RAPGEF3-218ENST00000548919 MAP1LC3B2A6NCE7 125 aa11.98□□□□□ -0.49
RAPGEF3-218ENST00000548919 FAM166BA8MTA8 275 aa11.98□□□□□ -0.49
RAPGEF3-218ENST00000548919 SIRPB1O00241 398 aa11.98□□□□□ -0.49
RAPGEF3-218ENST00000548919 PHOX2AO14813 284 aa11.98□□□□□ -0.49
RAPGEF3-218ENST00000548919 PTBP3O95758 552 aaKnown RBP11.98□□□□□ -0.49
RAPGEF3-218ENST00000548919 RND2P52198 227 aa11.98□□□□□ -0.49
RAPGEF3-218ENST00000548919 C3AR1Q16581 482 aa11.98□□□□□ -0.49
RAPGEF3-218ENST00000548919 OR8G2PQ6IF36 304 aa11.98□□□□□ -0.49
RAPGEF3-218ENST00000548919 MBD3L1Q8WWY6 194 aa11.98□□□□□ -0.49
RAPGEF3-218ENST00000548919 MAP1LC3BQ9GZQ8 125 aa11.98□□□□□ -0.49
RAPGEF3-218ENST00000548919 IGKV1D-33P01593 117 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms