RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 PSMB9P28065 219 aa12.7□□□□□ -0.38
DDX54-204ENST00000546898 VDAC2P45880 294 aaPredicted RBP12.7□□□□□ -0.38
DDX54-204ENST00000546898 ZNF137PP52743 207 aa12.7□□□□□ -0.38
DDX54-204ENST00000546898 HTD2P86397 168 aa12.7□□□□□ -0.38
DDX54-204ENST00000546898 DIAPH2-AS1Q14236 149 aa12.7□□□□□ -0.38
DDX54-204ENST00000546898 STEAP3Q658P3 488 aa12.7□□□□□ -0.38
DDX54-204ENST00000546898 ZNF773Q6PK81 442 aa12.7□□□□□ -0.38
DDX54-204ENST00000546898 MOB1BQ7L9L4 216 aa12.7□□□□□ -0.38
DDX54-204ENST00000546898 DRAM1Q8N682 238 aa12.7□□□□□ -0.38
DDX54-204ENST00000546898 ZNF439Q8NDP4 499 aa12.7□□□□□ -0.38
DDX54-204ENST00000546898 OR51D1Q8NGF3 324 aa12.7□□□□□ -0.38
DDX54-204ENST00000546898 FAM3DQ96BQ1 224 aa12.7□□□□□ -0.38
DDX54-204ENST00000546898 FAAP24Q9BTP7 215 aa12.7□□□□□ -0.38
DDX54-204ENST00000546898 MMP27Q9H306 513 aa12.7□□□□□ -0.38
DDX54-204ENST00000546898 RIMS4Q9H426 269 aaPredicted RBP12.7□□□□□ -0.38
DDX54-204ENST00000546898 HSF4Q9ULV5 492 aa12.7□□□□□ -0.38
DDX54-204ENST00000546898 MOB4Q9Y3A3 225 aa12.7□□□□□ -0.38
DDX54-204ENST00000546898 VWFP04275 2813 aa12.69□□□□□ -0.38
DDX54-204ENST00000546898 FOXI3A8MTJ6 420 aaPredicted RBP12.69□□□□□ -0.38
DDX54-204ENST00000546898 NAPSAO96009 420 aa12.69□□□□□ -0.38
DDX54-204ENST00000546898 CLDN12P56749 244 aa12.69□□□□□ -0.38
DDX54-204ENST00000546898 HMGN3Q15651 99 aa12.69□□□□□ -0.38
DDX54-204ENST00000546898 FBLN7Q53RD9 439 aa12.69□□□□□ -0.38
DDX54-204ENST00000546898 LY6G6FQ5SQ64 297 aa12.69□□□□□ -0.38
DDX54-204ENST00000546898 IZUMO1Q8IYV9 350 aa12.69□□□□□ -0.38
DDX54-204ENST00000546898 OR56B1Q8NGI3 324 aa12.69□□□□□ -0.38
DDX54-204ENST00000546898 ST6GALNAC6Q969X2 333 aa12.69□□□□□ -0.38
DDX54-204ENST00000546898 CYYR1Q96J86 154 aa12.69□□□□□ -0.38
DDX54-204ENST00000546898 WNT10AQ9GZT5 417 aa12.69□□□□□ -0.38
DDX54-204ENST00000546898 OR2S2Q9NQN1 319 aa12.69□□□□□ -0.38
DDX54-204ENST00000546898 ABRACLQ9P1F3 81 aa12.69□□□□□ -0.38
DDX54-204ENST00000546898 TRBV6-6A0A0A6YYG2 114 aa12.68□□□□□ -0.38
DDX54-204ENST00000546898 IGHV1-3A0A0C4DH29 117 aa12.68□□□□□ -0.38
DDX54-204ENST00000546898 SHISA3A0PJX4 238 aa12.68□□□□□ -0.38
DDX54-204ENST00000546898 LDLRAD4O15165 306 aa12.68□□□□□ -0.38
DDX54-204ENST00000546898 SOCS1O15524 211 aa12.68□□□□□ -0.38
DDX54-204ENST00000546898 RGS11O94810 467 aa12.68□□□□□ -0.38
DDX54-204ENST00000546898 TMEM11P17152 192 aa12.68□□□□□ -0.38
DDX54-204ENST00000546898 RAB3BP20337 219 aa12.68□□□□□ -0.38
DDX54-204ENST00000546898 FGF9P31371 208 aaPredicted RBP12.68□□□□□ -0.38
DDX54-204ENST00000546898 HES1Q14469 280 aa12.68□□□□□ -0.38
DDX54-204ENST00000546898 C2orf76Q3KRA6 126 aa12.68□□□□□ -0.38
DDX54-204ENST00000546898 KCTD21Q4G0X4 260 aa12.68□□□□□ -0.38
DDX54-204ENST00000546898 MORN2Q502X0 79 aa12.68□□□□□ -0.38
DDX54-204ENST00000546898 HES5Q5TA89 166 aa12.68□□□□□ -0.38
DDX54-204ENST00000546898 C22orf42Q6IC83 251 aa12.68□□□□□ -0.38
DDX54-204ENST00000546898 ZNF880Q6PDB4 577 aa12.68□□□□□ -0.38
DDX54-204ENST00000546898 Q6ZS46 218 aa12.68□□□□□ -0.38
DDX54-204ENST00000546898 OR10V1Q8NGI7 309 aa12.68□□□□□ -0.38
DDX54-204ENST00000546898 WIPF2Q8TF74 440 aaPredicted RBP12.68□□□□□ -0.38
DDX54-204ENST00000546898 RTN4IP1Q8WWV3 396 aaPredicted RBP12.68□□□□□ -0.38
DDX54-204ENST00000546898 GALMQ96C23 342 aa12.68□□□□□ -0.38
DDX54-204ENST00000546898 CHMP1AQ9HD42 196 aaPredicted RBP12.68□□□□□ -0.38
DDX54-204ENST00000546898 MGAT4AQ9UM21 535 aa12.68□□□□□ -0.38
DDX54-204ENST00000546898 STUB1Q9UNE7 303 aa12.68□□□□□ -0.38
DDX54-204ENST00000546898 TMEM272A0A1B0GTI8 110 aa12.67□□□□□ -0.38
DDX54-204ENST00000546898 IFITM5A6NNB3 132 aa12.67□□□□□ -0.38
DDX54-204ENST00000546898 SLC31A2O15432 143 aa12.67□□□□□ -0.38
DDX54-204ENST00000546898 FGF16O43320 207 aa12.67□□□□□ -0.38
DDX54-204ENST00000546898 YPEL1O60688 119 aa12.67□□□□□ -0.38
DDX54-204ENST00000546898 FBXO24O75426 580 aa12.67□□□□□ -0.38
DDX54-204ENST00000546898 IGKV1D-33P01593 117 aa12.67□□□□□ -0.38
DDX54-204ENST00000546898 IGKV1-33P01594 117 aa12.67□□□□□ -0.38
DDX54-204ENST00000546898 VEGFCP49767 419 aa12.67□□□□□ -0.38
DDX54-204ENST00000546898 EBI3Q14213 229 aa12.67□□□□□ -0.38
DDX54-204ENST00000546898 ABCA11PQ4W5N1 156 aa12.67□□□□□ -0.38
DDX54-204ENST00000546898 CT45A1Q5HYN5 189 aa12.67□□□□□ -0.38
DDX54-204ENST00000546898 FAM53AQ6NSI3 398 aaPredicted RBP12.67□□□□□ -0.38
DDX54-204ENST00000546898 MOB3BQ86TA1 216 aa12.67□□□□□ -0.38
DDX54-204ENST00000546898 TGIF2LXQ8IUE1 241 aa12.67□□□□□ -0.38
DDX54-204ENST00000546898 CT45A3Q8NHU0 189 aa12.67□□□□□ -0.38
DDX54-204ENST00000546898 YPEL2Q96QA6 119 aa12.67□□□□□ -0.38
DDX54-204ENST00000546898 ABHD14AQ9BUJ0 271 aa12.67□□□□□ -0.38
DDX54-204ENST00000546898 AK3Q9UIJ7 227 aa12.67□□□□□ -0.38
DDX54-204ENST00000546898 RAB22AQ9UL26 194 aa12.67□□□□□ -0.38
DDX54-204ENST00000546898 CMYA5Q8N3K9 4069 aa12.66□□□□□ -0.38
DDX54-204ENST00000546898 AMY1AP04745 511 aa12.66□□□□□ -0.38
DDX54-204ENST00000546898 AMY2AP04746 511 aa12.66□□□□□ -0.38
DDX54-204ENST00000546898 CSF1P09603 554 aa12.66□□□□□ -0.38
DDX54-204ENST00000546898 CD1BP29016 333 aa12.66□□□□□ -0.38
DDX54-204ENST00000546898 REG1BP48304 166 aa12.66□□□□□ -0.38
DDX54-204ENST00000546898 ZNF134P52741 427 aa12.66□□□□□ -0.38
DDX54-204ENST00000546898 TMEM50BP56557 158 aa12.66□□□□□ -0.38
DDX54-204ENST00000546898 OR10A3P58181 314 aa12.66□□□□□ -0.38
DDX54-204ENST00000546898 GNMTQ14749 295 aa12.66□□□□□ -0.38
DDX54-204ENST00000546898 TMEM95Q3KNT9 176 aa12.66□□□□□ -0.38
DDX54-204ENST00000546898 OR52L2PQ8NGH6 319 aa12.66□□□□□ -0.38
DDX54-204ENST00000546898 ARHGAP5-AS1Q96IT6 56 aa12.66□□□□□ -0.38
DDX54-204ENST00000546898 PECRQ9BY49 303 aa12.66□□□□□ -0.38
DDX54-204ENST00000546898 C12orf4Q9NQ89 552 aa12.66□□□□□ -0.38
DDX54-204ENST00000546898 TXNL4BQ9NX01 149 aaKnown RBP12.66□□□□□ -0.38
DDX54-204ENST00000546898 LANCL1O43813 399 aa12.65□□□□□ -0.38
DDX54-204ENST00000546898 TSPAN15O95858 294 aa12.65□□□□□ -0.38
DDX54-204ENST00000546898 RAB6AP20340 208 aa12.65□□□□□ -0.38
DDX54-204ENST00000546898 PPP1CCP36873 323 aaKnown RBP12.65□□□□□ -0.38
DDX54-204ENST00000546898 HLA-DRB3P79483 266 aa12.65□□□□□ -0.38
DDX54-204ENST00000546898 Q6ZPA2 131 aa12.65□□□□□ -0.38
DDX54-204ENST00000546898 TPRA1Q86W33 373 aa12.65□□□□□ -0.38
DDX54-204ENST00000546898 LYG1Q8N1E2 194 aa12.65□□□□□ -0.38
DDX54-204ENST00000546898 C5orf56Q8N8D9 126 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms