RNA–Protein interactions for RNA: ENST00000546603.5

CPNE8-204, Transcript of copine 8, humanhuman

TSL 3

Gene CPNE8, Length 1,036 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-204ENST00000546603 ILKQ13418 452 aa2.93□□□□□ -1.94
CPNE8-204ENST00000546603 HTR4Q13639 388 aa2.93□□□□□ -1.94
CPNE8-204ENST00000546603 USF2Q15853 346 aaPredicted RBP2.93□□□□□ -1.94
CPNE8-204ENST00000546603 SSX1Q16384 188 aa2.93□□□□□ -1.94
CPNE8-204ENST00000546603 MAPK14Q16539 360 aa2.93□□□□□ -1.94
CPNE8-204ENST00000546603 ALKBH6Q3KRA9 238 aa2.93□□□□□ -1.94
CPNE8-204ENST00000546603 XKR4Q5GH76 650 aa2.93□□□□□ -1.94
CPNE8-204ENST00000546603 RAET1LQ5VY80 246 aa2.93□□□□□ -1.94
CPNE8-204ENST00000546603 ALKAL2Q6UX46 152 aa2.93□□□□□ -1.94
CPNE8-204ENST00000546603 VTCN1Q7Z7D3 282 aa2.93□□□□□ -1.94
CPNE8-204ENST00000546603 TGIF2LXQ8IUE1 241 aa2.93□□□□□ -1.94
CPNE8-204ENST00000546603 TMEM86AQ8N2M4 240 aa2.93□□□□□ -1.94
CPNE8-204ENST00000546603 OR11H7Q8NGC8 314 aa2.93□□□□□ -1.94
CPNE8-204ENST00000546603 TERB2Q8NHR7 220 aa2.93□□□□□ -1.94
CPNE8-204ENST00000546603 MITD1Q8WV92 249 aa2.93□□□□□ -1.94
CPNE8-204ENST00000546603 CPNE4Q96A23 557 aaPredicted RBP2.93□□□□□ -1.94
CPNE8-204ENST00000546603 SMARCD1Q96GM5 515 aa2.93□□□□□ -1.94
CPNE8-204ENST00000546603 TSSK3Q96PN8 268 aa2.93□□□□□ -1.94
CPNE8-204ENST00000546603 S100A13Q99584 98 aa2.93□□□□□ -1.94
CPNE8-204ENST00000546603 ULBP1Q9BZM6 244 aa2.93□□□□□ -1.94
CPNE8-204ENST00000546603 C11orf49Q9H6J7 331 aa2.93□□□□□ -1.94
CPNE8-204ENST00000546603 ZNF430Q9H8G1 570 aaPredicted RBP2.93□□□□□ -1.94
CPNE8-204ENST00000546603 TPT1P8Q9HAU6 139 aa2.93□□□□□ -1.94
CPNE8-204ENST00000546603 C14orf105Q9NVL8 296 aa2.93□□□□□ -1.94
CPNE8-204ENST00000546603 NLE1Q9NVX2 485 aaPredicted RBP2.93□□□□□ -1.94
CPNE8-204ENST00000546603 MRPL22Q9NWU5 206 aaKnown RBP2.93□□□□□ -1.94
CPNE8-204ENST00000546603 COA4Q9NYJ1 87 aa2.93□□□□□ -1.94
CPNE8-204ENST00000546603 TVP23BQ9NYZ1 205 aa2.93□□□□□ -1.94
CPNE8-204ENST00000546603 DNAJC27Q9NZQ0 273 aa2.93□□□□□ -1.94
CPNE8-204ENST00000546603 ABRACLQ9P1F3 81 aa2.93□□□□□ -1.94
CPNE8-204ENST00000546603 ZNF629Q9UEG4 869 aaPredicted RBP2.93□□□□□ -1.94
CPNE8-204ENST00000546603 SCML1Q9UN30 329 aa2.93□□□□□ -1.94
CPNE8-204ENST00000546603 SNX10Q9Y5X0 201 aa2.93□□□□□ -1.94
CPNE8-204ENST00000546603 ENPP4Q9Y6X5 453 aa2.93□□□□□ -1.94
CPNE8-204ENST00000546603 A0A0G2JMZ2 1700 aa2.93□□□□□ -1.94
CPNE8-204ENST00000546603 LRRC37A2A6NM11 1700 aa2.93□□□□□ -1.94
CPNE8-204ENST00000546603 LRRC37AA6NMS7 1700 aa2.93□□□□□ -1.94
CPNE8-204ENST00000546603 COL5A3P25940 1745 aaPredicted RBP2.93□□□□□ -1.94
CPNE8-204ENST00000546603 TET2Q6N021 2002 aaPredicted RBP2.92□□□□□ -1.94
CPNE8-204ENST00000546603 DAPL1A0PJW8 107 aa2.92□□□□□ -1.94
CPNE8-204ENST00000546603 PLAC8L1A1L4L8 177 aa2.92□□□□□ -1.94
CPNE8-204ENST00000546603 OR6C74A6NCV1 312 aa2.92□□□□□ -1.94
CPNE8-204ENST00000546603 ZNF729A6NN14 1252 aaPredicted RBP2.92□□□□□ -1.94
CPNE8-204ENST00000546603 LINC00587B1AMM8 73 aa2.92□□□□□ -1.94
CPNE8-204ENST00000546603 DNASE2O00115 360 aaPredicted RBP2.92□□□□□ -1.94
CPNE8-204ENST00000546603 GSTZ1O43708 216 aaPredicted RBP2.92□□□□□ -1.94
CPNE8-204ENST00000546603 EIF1BO60739 113 aaKnown RBP2.92□□□□□ -1.94
CPNE8-204ENST00000546603 EIF3GO75821 320 aaKnown RBP eCLIP2.92□□□□□ -1.94
CPNE8-204ENST00000546603 MPC2O95563 127 aa2.92□□□□□ -1.94
CPNE8-204ENST00000546603 MT-ND4P03905 459 aa2.92□□□□□ -1.94
CPNE8-204ENST00000546603 GLAP06280 429 aa2.92□□□□□ -1.94
CPNE8-204ENST00000546603 C8GP07360 202 aa2.92□□□□□ -1.94
CPNE8-204ENST00000546603 NMBP08949 121 aa2.92□□□□□ -1.94
CPNE8-204ENST00000546603 FBP1P09467 338 aa2.92□□□□□ -1.94
CPNE8-204ENST00000546603 GABRA1P14867 456 aa2.92□□□□□ -1.94
CPNE8-204ENST00000546603 ZNF43P17038 809 aa2.92□□□□□ -1.94
CPNE8-204ENST00000546603 CELP19835 753 aa2.92□□□□□ -1.94
CPNE8-204ENST00000546603 EIF1P41567 113 aaKnown RBP2.92□□□□□ -1.94
CPNE8-204ENST00000546603 FBXW4P57775 412 aa2.92□□□□□ -1.94
CPNE8-204ENST00000546603 DAOAP59103 153 aa2.92□□□□□ -1.94
CPNE8-204ENST00000546603 RPS25P62851 125 aaKnown RBP2.92□□□□□ -1.94
CPNE8-204ENST00000546603 RPS21P63220 83 aaKnown RBP2.92□□□□□ -1.94
CPNE8-204ENST00000546603 CDK6Q00534 326 aa2.92□□□□□ -1.94
CPNE8-204ENST00000546603 HMGCS1Q01581 520 aa2.92□□□□□ -1.94
CPNE8-204ENST00000546603 GINS1Q14691 196 aa2.92□□□□□ -1.94
CPNE8-204ENST00000546603 RHEBQ15382 184 aa2.92□□□□□ -1.94
CPNE8-204ENST00000546603 RGNQ15493 299 aa2.92□□□□□ -1.94
CPNE8-204ENST00000546603 UBE2NLQ5JXB2 153 aa2.92□□□□□ -1.94
CPNE8-204ENST00000546603 FKBP1CQ5VVH2 108 aa2.92□□□□□ -1.94
CPNE8-204ENST00000546603 SYPL2Q5VXT5 272 aa2.92□□□□□ -1.94
CPNE8-204ENST00000546603 KRTAP5-7Q6L8G8 165 aa2.92□□□□□ -1.94
CPNE8-204ENST00000546603 REEP3Q6NUK4 255 aa2.92□□□□□ -1.94
CPNE8-204ENST00000546603 NOXRED1Q6NXP6 359 aa2.92□□□□□ -1.94
CPNE8-204ENST00000546603 H3F3CQ6NXT2 135 aa2.92□□□□□ -1.94
CPNE8-204ENST00000546603 LPCAT3Q6P1A2 487 aa2.92□□□□□ -1.94
CPNE8-204ENST00000546603 CYHR1Q6ZMK1 362 aa2.92□□□□□ -1.94
CPNE8-204ENST00000546603 OAFQ86UD1 273 aa2.92□□□□□ -1.94
CPNE8-204ENST00000546603 NAA40Q86UY6 237 aa2.92□□□□□ -1.94
CPNE8-204ENST00000546603 GID4Q8IVV7 300 aa2.92□□□□□ -1.94
CPNE8-204ENST00000546603 GTPBP8Q8N3Z3 284 aaPredicted RBP2.92□□□□□ -1.94
CPNE8-204ENST00000546603 KRTCAP2Q8N6L1 136 aa2.92□□□□□ -1.94
CPNE8-204ENST00000546603 NPWQ8N729 165 aa2.92□□□□□ -1.94
CPNE8-204ENST00000546603 ZFP41Q8N8Y5 198 aa2.92□□□□□ -1.94
CPNE8-204ENST00000546603 OR4C5Q8NGB2 326 aa2.92□□□□□ -1.94
CPNE8-204ENST00000546603 OR8J2Q8NGG1 315 aa2.92□□□□□ -1.94
CPNE8-204ENST00000546603 OR52L1Q8NGH7 329 aa2.92□□□□□ -1.94
CPNE8-204ENST00000546603 GNPDA2Q8TDQ7 276 aa2.92□□□□□ -1.94
CPNE8-204ENST00000546603 GLYATL2Q8WU03 294 aa2.92□□□□□ -1.94
CPNE8-204ENST00000546603 DNAJB3Q8WWF6 145 aa2.92□□□□□ -1.94
CPNE8-204ENST00000546603 MAFIPQ8WZ33 124 aa2.92□□□□□ -1.94
CPNE8-204ENST00000546603 TMEM54Q969K7 222 aa2.92□□□□□ -1.94
CPNE8-204ENST00000546603 RAD51AP1Q96B01 352 aa2.92□□□□□ -1.94
CPNE8-204ENST00000546603 PPCDCQ96CD2 204 aa2.92□□□□□ -1.94
CPNE8-204ENST00000546603 BMFQ96LC9 184 aa2.92□□□□□ -1.94
CPNE8-204ENST00000546603 PRRC1Q96M27 445 aa2.92□□□□□ -1.94
CPNE8-204ENST00000546603 TM6SF2Q9BZW4 377 aa2.92□□□□□ -1.94
CPNE8-204ENST00000546603 TOLLIPQ9H0E2 274 aa2.92□□□□□ -1.94
CPNE8-204ENST00000546603 MIXL1Q9H2W2 232 aa2.92□□□□□ -1.94
CPNE8-204ENST00000546603 RGCCQ9H4X1 137 aa2.92□□□□□ -1.94
CPNE8-204ENST00000546603 NMNAT1Q9HAN9 279 aaPredicted RBP2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms