RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 SPEF1Q9Y4P9 236 aa10□□□□□ -0.81
CCDC38-202ENST00000546386 NHLH2Q02577 135 aa9.99□□□□□ -0.81
CCDC38-202ENST00000546386 NHLRC3Q5JS37 347 aa9.99□□□□□ -0.81
CCDC38-202ENST00000546386 SLC38A6Q8IZM9 456 aa9.99□□□□□ -0.81
CCDC38-202ENST00000546386 VKORC1L1Q8N0U8 176 aa9.99□□□□□ -0.81
CCDC38-202ENST00000546386 LILRB1Q8NHL6 650 aaPredicted RBP9.99□□□□□ -0.81
CCDC38-202ENST00000546386 CA5BP1Q8WTZ4 195 aa9.99□□□□□ -0.81
CCDC38-202ENST00000546386 TMED6Q8WW62 240 aa9.99□□□□□ -0.81
CCDC38-202ENST00000546386 PSG11Q9UQ72 335 aa9.99□□□□□ -0.81
CCDC38-202ENST00000546386 ZNF835Q9Y2P0 537 aa9.99□□□□□ -0.81
CCDC38-202ENST00000546386 NSG2Q9Y328 171 aa9.99□□□□□ -0.81
CCDC38-202ENST00000546386 KIR2DS1A0A191URI9 304 aa9.99□□□□□ -0.81
CCDC38-202ENST00000546386 ANKRD34BA5PLL1 514 aa9.99□□□□□ -0.81
CCDC38-202ENST00000546386 SIAH2O43255 324 aa9.99□□□□□ -0.81
CCDC38-202ENST00000546386 CA11O75493 328 aa9.99□□□□□ -0.81
CCDC38-202ENST00000546386 KIR2DS4P43632 304 aa9.99□□□□□ -0.81
CCDC38-202ENST00000546386 TLE1Q04724 770 aa9.99□□□□□ -0.81
CCDC38-202ENST00000546386 KIR2DS1Q14954 304 aa9.99□□□□□ -0.81
CCDC38-202ENST00000546386 SMIM21Q3B7S5 101 aa9.99□□□□□ -0.81
CCDC38-202ENST00000546386 RNASE11Q8TAA1 199 aaKnown RBP9.99□□□□□ -0.81
CCDC38-202ENST00000546386 ERGIC1Q969X5 290 aa9.99□□□□□ -0.81
CCDC38-202ENST00000546386 C2orf50Q96LR7 162 aa9.99□□□□□ -0.81
CCDC38-202ENST00000546386 SPACA1Q9HBV2 294 aa9.99□□□□□ -0.81
CCDC38-202ENST00000546386 RAB18Q9NP72 206 aa9.99□□□□□ -0.81
CCDC38-202ENST00000546386 TRBV6-7A0A0A0MS04 114 aa9.98□□□□□ -0.81
CCDC38-202ENST00000546386 KANTRA0A1W2PQU2 76 aa9.98□□□□□ -0.81
CCDC38-202ENST00000546386 ZG16O60844 167 aa9.98□□□□□ -0.81
CCDC38-202ENST00000546386 EIF3GO75821 320 aaKnown RBP eCLIP9.98□□□□□ -0.81
CCDC38-202ENST00000546386 MMP23AO75900 390 aa9.98□□□□□ -0.81
CCDC38-202ENST00000546386 SELENOVP59797 346 aa9.98□□□□□ -0.81
CCDC38-202ENST00000546386 RBPJQ06330 500 aa9.98□□□□□ -0.81
CCDC38-202ENST00000546386 LIAT1Q6ZQX7 453 aa9.98□□□□□ -0.81
CCDC38-202ENST00000546386 Q6ZRM9 215 aa9.98□□□□□ -0.81
CCDC38-202ENST00000546386 SSX9Q7RTT3 188 aa9.98□□□□□ -0.81
CCDC38-202ENST00000546386 C5orf30Q96GV9 206 aa9.98□□□□□ -0.81
CCDC38-202ENST00000546386 RSRP1Q9BUV0 290 aa9.98□□□□□ -0.81
CCDC38-202ENST00000546386 E7EQL1 145 aa9.98□□□□□ -0.81
CCDC38-202ENST00000546386 SSSCA1O60232 199 aa9.98□□□□□ -0.81
CCDC38-202ENST00000546386 KRASP01116 189 aa9.98□□□□□ -0.81
CCDC38-202ENST00000546386 IFNA21P01568 189 aa9.98□□□□□ -0.81
CCDC38-202ENST00000546386 PRB1P04280 392 aa9.98□□□□□ -0.81
CCDC38-202ENST00000546386 GNG10P50151 68 aa9.98□□□□□ -0.81
CCDC38-202ENST00000546386 RPL30P62888 115 aaKnown RBP9.98□□□□□ -0.81
CCDC38-202ENST00000546386 ADORA2A-AS1P86434 159 aa9.98□□□□□ -0.81
CCDC38-202ENST00000546386 KLRB1Q12918 225 aa9.98□□□□□ -0.81
CCDC38-202ENST00000546386 IL13RA2Q14627 380 aa9.98□□□□□ -0.81
CCDC38-202ENST00000546386 IGFBPL1Q8WX77 278 aa9.98□□□□□ -0.81
CCDC38-202ENST00000546386 GALMQ96C23 342 aa9.98□□□□□ -0.81
CCDC38-202ENST00000546386 HES4Q9HCC6 221 aa9.98□□□□□ -0.81
CCDC38-202ENST00000546386 RAI1Q7Z5J4 1906 aaPredicted RBP9.98□□□□□ -0.81
CCDC38-202ENST00000546386 RPS10-NUDT3A0A1W2PQS6 291 aa9.97□□□□□ -0.81
CCDC38-202ENST00000546386 TMEM210A6NLX4 147 aa9.97□□□□□ -0.81
CCDC38-202ENST00000546386 KIAA1324LA8MWY0 1029 aaPredicted RBP9.97□□□□□ -0.81
CCDC38-202ENST00000546386 LEUTXA8MZ59 168 aa9.97□□□□□ -0.81
CCDC38-202ENST00000546386 GPR31O00270 319 aa9.97□□□□□ -0.81
CCDC38-202ENST00000546386 CST7O76096 145 aa9.97□□□□□ -0.81
CCDC38-202ENST00000546386 OR2F2O95006 317 aa9.97□□□□□ -0.81
CCDC38-202ENST00000546386 IFNA7P01567 189 aa9.97□□□□□ -0.81
CCDC38-202ENST00000546386 NDUFB7P17568 137 aa9.97□□□□□ -0.81
CCDC38-202ENST00000546386 KCNJ3P48549 501 aa9.97□□□□□ -0.81
CCDC38-202ENST00000546386 CAV2P51636 162 aa9.97□□□□□ -0.81
CCDC38-202ENST00000546386 ZNF134P52741 427 aa9.97□□□□□ -0.81
CCDC38-202ENST00000546386 CLINT1Q14677 625 aa9.97□□□□□ -0.81
CCDC38-202ENST00000546386 RPL7L1Q6DKI1 246 aaKnown RBP9.97□□□□□ -0.81
CCDC38-202ENST00000546386 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.97□□□□□ -0.81
CCDC38-202ENST00000546386 ST8SIA2Q92186 375 aa9.97□□□□□ -0.81
CCDC38-202ENST00000546386 DECR2Q9NUI1 292 aa9.97□□□□□ -0.81
CCDC38-202ENST00000546386 PTPN13Q12923 2485 aa9.97□□□□□ -0.81
CCDC38-202ENST00000546386 FAM90A10PA6NDY2 464 aa9.97□□□□□ -0.81
CCDC38-202ENST00000546386 FAM90A18PA6NE21 464 aa9.97□□□□□ -0.81
CCDC38-202ENST00000546386 FAM90A16PA6NEW6 464 aa9.97□□□□□ -0.81
CCDC38-202ENST00000546386 FAM90A20PA6NIJ5 464 aa9.97□□□□□ -0.81
CCDC38-202ENST00000546386 FAM90A8PA6NJQ4 464 aa9.97□□□□□ -0.81
CCDC38-202ENST00000546386 FAM90A7PA6NKC0 464 aa9.97□□□□□ -0.81
CCDC38-202ENST00000546386 HMSDA8MTL9 139 aa9.97□□□□□ -0.81
CCDC38-202ENST00000546386 FAM90A22PA8MWA6 464 aa9.97□□□□□ -0.81
CCDC38-202ENST00000546386 FAM90A12PA8MX19 464 aa9.97□□□□□ -0.81
CCDC38-202ENST00000546386 FAM90A5PA8MXJ8 464 aa9.97□□□□□ -0.81
CCDC38-202ENST00000546386 FAM90A23PA8MXZ1 464 aa9.97□□□□□ -0.81
CCDC38-202ENST00000546386 SLC31A2O15432 143 aa9.97□□□□□ -0.81
CCDC38-202ENST00000546386 HEXAP06865 529 aa9.97□□□□□ -0.81
CCDC38-202ENST00000546386 FAM90A15PP0C7V4 464 aa9.97□□□□□ -0.81
CCDC38-202ENST00000546386 FAM90A13PP0C7W8 464 aa9.97□□□□□ -0.81
CCDC38-202ENST00000546386 FAM90A14PP0C7W9 464 aa9.97□□□□□ -0.81
CCDC38-202ENST00000546386 FAM90A24PP0C7X0 464 aa9.97□□□□□ -0.81
CCDC38-202ENST00000546386 RPL39P5Q59GN2 51 aa9.97□□□□□ -0.81
CCDC38-202ENST00000546386 LYPD2Q6UXB3 125 aa9.97□□□□□ -0.81
CCDC38-202ENST00000546386 C1orf229Q6ZS94 237 aaPredicted RBP9.97□□□□□ -0.81
CCDC38-202ENST00000546386 ACOT7LQ6ZUV0 252 aa9.97□□□□□ -0.81
CCDC38-202ENST00000546386 COMMD7Q86VX2 200 aa9.97□□□□□ -0.81
CCDC38-202ENST00000546386 Q8IYB0 196 aa9.97□□□□□ -0.81
CCDC38-202ENST00000546386 CMTM1Q8IZ96 169 aa9.97□□□□□ -0.81
CCDC38-202ENST00000546386 H1FOOQ8IZA3 346 aaPredicted RBP9.97□□□□□ -0.81
CCDC38-202ENST00000546386 DRAM1Q8N682 238 aa9.97□□□□□ -0.81
CCDC38-202ENST00000546386 SPERTQ8NA61 448 aa9.97□□□□□ -0.81
CCDC38-202ENST00000546386 KCNIP1Q9NZI2 227 aa9.97□□□□□ -0.81
CCDC38-202ENST00000546386 GNG12Q9UBI6 72 aa9.97□□□□□ -0.81
CCDC38-202ENST00000546386 FBN2P35556 2912 aa9.96□□□□□ -0.81
CCDC38-202ENST00000546386 TMEM30CPA0ZSE6 113 aa9.96□□□□□ -0.81
CCDC38-202ENST00000546386 FAM24AA6NFZ4 105 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms