RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 SERPINE3A8MV23 424 aa13.61□□□□□ -0.23
LTBR-215ENST00000546296 MFNGO00587 321 aa13.61□□□□□ -0.23
LTBR-215ENST00000546296 NOL3O60936 208 aaKnown RBP13.61□□□□□ -0.23
LTBR-215ENST00000546296 CRYBA1P05813 215 aa13.61□□□□□ -0.23
LTBR-215ENST00000546296 RORCP51449 518 aa13.61□□□□□ -0.23
LTBR-215ENST00000546296 LOXL3P58215 753 aa13.61□□□□□ -0.23
LTBR-215ENST00000546296 HMGN3Q15651 99 aa13.61□□□□□ -0.23
LTBR-215ENST00000546296 AANATQ16613 207 aa13.61□□□□□ -0.23
LTBR-215ENST00000546296 FAM53AQ6NSI3 398 aaPredicted RBP13.61□□□□□ -0.23
LTBR-215ENST00000546296 ZNF880Q6PDB4 577 aa13.61□□□□□ -0.23
LTBR-215ENST00000546296 OR52L2PQ8NGH6 319 aa13.61□□□□□ -0.23
LTBR-215ENST00000546296 DCSTAMPQ9H295 470 aa13.61□□□□□ -0.23
LTBR-215ENST00000546296 DIABLOQ9NR28 239 aa13.61□□□□□ -0.23
LTBR-215ENST00000546296 RAB13P51153 203 aa13.6□□□□□ -0.23
LTBR-215ENST00000546296 ARHGDIBP52566 201 aa13.6□□□□□ -0.23
LTBR-215ENST00000546296 HTD2P86397 168 aa13.6□□□□□ -0.23
LTBR-215ENST00000546296 MADCAM1Q13477 382 aa13.6□□□□□ -0.23
LTBR-215ENST00000546296 LY6EQ16553 131 aa13.6□□□□□ -0.23
LTBR-215ENST00000546296 TPTE2P1Q5T6R2 138 aa13.6□□□□□ -0.23
LTBR-215ENST00000546296 GCDHQ92947 438 aaPredicted RBP13.6□□□□□ -0.23
LTBR-215ENST00000546296 RPEQ96AT9 228 aa13.6□□□□□ -0.23
LTBR-215ENST00000546296 KCTD12Q96CX2 325 aaKnown RBP13.6□□□□□ -0.23
LTBR-215ENST00000546296 SLC25A38Q96DW6 304 aa13.6□□□□□ -0.23
LTBR-215ENST00000546296 Q9N2K0 584 aa13.6□□□□□ -0.23
LTBR-215ENST00000546296 VPREB3Q9UKI3 123 aa13.6□□□□□ -0.23
LTBR-215ENST00000546296 TRAV18A0A075B6X5 111 aa13.59□□□□□ -0.23
LTBR-215ENST00000546296 FAM181BA6NEQ2 426 aa13.59□□□□□ -0.23
LTBR-215ENST00000546296 TRDCB7Z8K6 153 aa13.59□□□□□ -0.23
LTBR-215ENST00000546296 RGS11O94810 467 aa13.59□□□□□ -0.23
LTBR-215ENST00000546296 GSTP1P09211 210 aaKnown RBP13.59□□□□□ -0.23
LTBR-215ENST00000546296 IL3RAP26951 378 aa13.59□□□□□ -0.23
LTBR-215ENST00000546296 HLA-DRB3P79483 266 aa13.59□□□□□ -0.23
LTBR-215ENST00000546296 UBE2NLQ5JXB2 153 aa13.59□□□□□ -0.23
LTBR-215ENST00000546296 CCDC144NLQ6NUI1 221 aa13.59□□□□□ -0.23
LTBR-215ENST00000546296 Q6ZPA2 131 aa13.59□□□□□ -0.23
LTBR-215ENST00000546296 SAMD12Q8N8I0 201 aa13.59□□□□□ -0.23
LTBR-215ENST00000546296 C8orf31Q8N9H6 132 aa13.59□□□□□ -0.23
LTBR-215ENST00000546296 RAB2BQ8WUD1 216 aa13.59□□□□□ -0.23
LTBR-215ENST00000546296 S100A16Q96FQ6 103 aaKnown RBP13.59□□□□□ -0.23
LTBR-215ENST00000546296 COMMD3Q9UBI1 195 aa13.59□□□□□ -0.23
LTBR-215ENST00000546296 JPT1Q9UK76 154 aa13.59□□□□□ -0.23
LTBR-215ENST00000546296 COL6A5A8TX70 2615 aa13.59□□□□□ -0.23
LTBR-215ENST00000546296 A0A0A6YYH2 397 aa13.58□□□□□ -0.24
LTBR-215ENST00000546296 A6NJ64 397 aa13.58□□□□□ -0.24
LTBR-215ENST00000546296 VGLL3A8MV65 326 aa13.58□□□□□ -0.24
LTBR-215ENST00000546296 LY6LH3BQJ8 138 aa13.58□□□□□ -0.24
LTBR-215ENST00000546296 GPR137BO60478 399 aa13.58□□□□□ -0.24
LTBR-215ENST00000546296 FCGR3AP08637 254 aa13.58□□□□□ -0.24
LTBR-215ENST00000546296 BRS3P32247 399 aa13.58□□□□□ -0.24
LTBR-215ENST00000546296 PPP1CCP36873 323 aaKnown RBP13.58□□□□□ -0.24
LTBR-215ENST00000546296 MNDAP41218 407 aa13.58□□□□□ -0.24
LTBR-215ENST00000546296 TMBIM6P55061 237 aa13.58□□□□□ -0.24
LTBR-215ENST00000546296 GNG2P59768 71 aa13.58□□□□□ -0.24
LTBR-215ENST00000546296 GNMTQ14749 295 aa13.58□□□□□ -0.24
LTBR-215ENST00000546296 Q3ZCU0 254 aa13.58□□□□□ -0.24
LTBR-215ENST00000546296 MORN2Q502X0 79 aa13.58□□□□□ -0.24
LTBR-215ENST00000546296 HACD4Q5VWC8 232 aa13.58□□□□□ -0.24
LTBR-215ENST00000546296 STEAP3Q658P3 488 aa13.58□□□□□ -0.24
LTBR-215ENST00000546296 IZUMO1Q8IYV9 350 aa13.58□□□□□ -0.24
LTBR-215ENST00000546296 LINC00311Q8N616 119 aa13.58□□□□□ -0.24
LTBR-215ENST00000546296 ACOT12Q8WYK0 555 aa13.58□□□□□ -0.24
LTBR-215ENST00000546296 TOMM40LQ969M1 308 aa13.58□□□□□ -0.24
LTBR-215ENST00000546296 OCSTAMPQ9BR26 566 aa13.58□□□□□ -0.24
LTBR-215ENST00000546296 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.58□□□□□ -0.24
LTBR-215ENST00000546296 ELF5Q9UKW6 265 aaPredicted RBP13.58□□□□□ -0.24
LTBR-215ENST00000546296 TMEM235A6NFC5 223 aa13.57□□□□□ -0.24
LTBR-215ENST00000546296 OOSP1A8MZH6 123 aa13.57□□□□□ -0.24
LTBR-215ENST00000546296 HSPA12AO43301 675 aa13.57□□□□□ -0.24
LTBR-215ENST00000546296 SCTP09683 121 aa13.57□□□□□ -0.24
LTBR-215ENST00000546296 PITPNAQ00169 270 aa13.57□□□□□ -0.24
LTBR-215ENST00000546296 PNLIPRP3Q17RR3 467 aa13.57□□□□□ -0.24
LTBR-215ENST00000546296 ZNF260Q3ZCT1 412 aa13.57□□□□□ -0.24
LTBR-215ENST00000546296 CT45A1Q5HYN5 189 aa13.57□□□□□ -0.24
LTBR-215ENST00000546296 MZT2AQ6P582 158 aa13.57□□□□□ -0.24
LTBR-215ENST00000546296 CT45A3Q8NHU0 189 aa13.57□□□□□ -0.24
LTBR-215ENST00000546296 AP3S1Q92572 193 aa13.57□□□□□ -0.24
LTBR-215ENST00000546296 BCL7BQ9BQE9 202 aa13.57□□□□□ -0.24
LTBR-215ENST00000546296 ABCG5Q9H222 651 aa13.57□□□□□ -0.24
LTBR-215ENST00000546296 ZNF230Q9UIE0 474 aaPredicted RBP13.57□□□□□ -0.24
LTBR-215ENST00000546296 SLC31A2O15432 143 aa13.56□□□□□ -0.24
LTBR-215ENST00000546296 YPEL1O60688 119 aa13.56□□□□□ -0.24
LTBR-215ENST00000546296 GAPDHP04406 335 aaKnown RBP13.56□□□□□ -0.24
LTBR-215ENST00000546296 ZNF182P17025 639 aaPredicted RBP13.56□□□□□ -0.24
LTBR-215ENST00000546296 ZBTB25P24278 435 aa13.56□□□□□ -0.24
LTBR-215ENST00000546296 SOX6P35712 828 aa13.56□□□□□ -0.24
LTBR-215ENST00000546296 KIR2DS4P43632 304 aa13.56□□□□□ -0.24
LTBR-215ENST00000546296 RAB7AP51149 207 aa13.56□□□□□ -0.24
LTBR-215ENST00000546296 DYNLT3P51808 116 aa13.56□□□□□ -0.24
LTBR-215ENST00000546296 ZNF134P52741 427 aa13.56□□□□□ -0.24
LTBR-215ENST00000546296 KIR2DS1Q14954 304 aa13.56□□□□□ -0.24
LTBR-215ENST00000546296 SPCS2Q15005 226 aa13.56□□□□□ -0.24
LTBR-215ENST00000546296 DHRS7BQ6IAN0 325 aaPredicted RBP13.56□□□□□ -0.24
LTBR-215ENST00000546296 SLC25A48Q6ZT89 311 aaKnown RBP13.56□□□□□ -0.24
LTBR-215ENST00000546296 DTX3Q8N9I9 347 aa13.56□□□□□ -0.24
LTBR-215ENST00000546296 OR2AK2Q8NG84 335 aa13.56□□□□□ -0.24
LTBR-215ENST00000546296 PIFOQ8TCI5 191 aa13.56□□□□□ -0.24
LTBR-215ENST00000546296 NUDCD2Q8WVJ2 157 aa13.56□□□□□ -0.24
LTBR-215ENST00000546296 MAFIPQ8WZ33 124 aa13.56□□□□□ -0.24
LTBR-215ENST00000546296 YPEL2Q96QA6 119 aa13.56□□□□□ -0.24
LTBR-215ENST00000546296 ST6GALNAC5Q9BVH7 336 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms