RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 SEC16AO15027 2179 aa6.78□□□□□ -1.32
UBR1-202ENST00000546274 LRRC3CA6NJW4 275 aa6.78□□□□□ -1.32
UBR1-202ENST00000546274 TMEM14DPA8MWL7 114 aa6.78□□□□□ -1.32
UBR1-202ENST00000546274 SERF1AO75920 110 aa6.78□□□□□ -1.32
UBR1-202ENST00000546274 ZNF205O95201 554 aa6.78□□□□□ -1.32
UBR1-202ENST00000546274 SYNGR4O95473 234 aa6.78□□□□□ -1.32
UBR1-202ENST00000546274 ONECUT2O95948 504 aa6.78□□□□□ -1.32
UBR1-202ENST00000546274 HRASP01112 189 aa6.78□□□□□ -1.32
UBR1-202ENST00000546274 HLA-HP01893 362 aa6.78□□□□□ -1.32
UBR1-202ENST00000546274 ZNF823P16415 610 aa6.78□□□□□ -1.32
UBR1-202ENST00000546274 TSPOP30536 169 aa6.78□□□□□ -1.32
UBR1-202ENST00000546274 ZNF93P35789 620 aaPredicted RBP6.78□□□□□ -1.32
UBR1-202ENST00000546274 CSNK2A1P68400 391 aaPredicted RBP6.78□□□□□ -1.32
UBR1-202ENST00000546274 EWSR1Q01844 656 aaKnown RBP eCLIP6.78□□□□□ -1.32
UBR1-202ENST00000546274 FAM78BQ5VT40 261 aa6.78□□□□□ -1.32
UBR1-202ENST00000546274 HLA-DQA1Q5Y7H0 255 aa6.78□□□□□ -1.32
UBR1-202ENST00000546274 ABHD12BQ7Z5M8 362 aaPredicted RBP6.78□□□□□ -1.32
UBR1-202ENST00000546274 BAGE3Q86Y29 109 aa6.78□□□□□ -1.32
UBR1-202ENST00000546274 BAGE2Q86Y30 109 aa6.78□□□□□ -1.32
UBR1-202ENST00000546274 DEFB119Q8N690 84 aa6.78□□□□□ -1.32
UBR1-202ENST00000546274 CSNK2A3Q8NEV1 391 aa6.78□□□□□ -1.32
UBR1-202ENST00000546274 OR10W1Q8NGF6 305 aa6.78□□□□□ -1.32
UBR1-202ENST00000546274 RBM24Q9BX46 236 aaKnown RBP6.78□□□□□ -1.32
UBR1-202ENST00000546274 ANAPC10Q9UM13 185 aa6.78□□□□□ -1.32
UBR1-202ENST00000546274 B3GALT1Q9Y5Z6 326 aa6.78□□□□□ -1.32
UBR1-202ENST00000546274 DOCK11Q5JSL3 2073 aa6.78□□□□□ -1.32
UBR1-202ENST00000546274 TRAV26-1A0A087WT03 109 aa6.78□□□□□ -1.32
UBR1-202ENST00000546274 A0A1B0GV72 72 aa6.78□□□□□ -1.32
UBR1-202ENST00000546274 NPIPB13A6NJU9 1138 aa6.78□□□□□ -1.32
UBR1-202ENST00000546274 FIGNL2A6NMB9 653 aa6.78□□□□□ -1.32
UBR1-202ENST00000546274 GJE1A6NN92 205 aa6.78□□□□□ -1.32
UBR1-202ENST00000546274 NPIPB4C9JG80 1138 aa6.78□□□□□ -1.32
UBR1-202ENST00000546274 EFNA2O43921 213 aa6.78□□□□□ -1.32
UBR1-202ENST00000546274 CSNK1A1P48729 337 aa6.78□□□□□ -1.32
UBR1-202ENST00000546274 EMP2P54851 167 aa6.78□□□□□ -1.32
UBR1-202ENST00000546274 POU3F1Q03052 451 aaPredicted RBP6.78□□□□□ -1.32
UBR1-202ENST00000546274 RBPJQ06330 500 aa6.78□□□□□ -1.32
UBR1-202ENST00000546274 KIAA2026Q5HYC2 2103 aa6.78□□□□□ -1.32
UBR1-202ENST00000546274 TSPO2Q5TGU0 170 aa6.78□□□□□ -1.32
UBR1-202ENST00000546274 LYZL2Q7Z4W2 148 aa6.78□□□□□ -1.32
UBR1-202ENST00000546274 OR52M1Q8NGK5 317 aa6.78□□□□□ -1.32
UBR1-202ENST00000546274 DAZLQ92904 295 aaKnown RBP6.78□□□□□ -1.32
UBR1-202ENST00000546274 SLAMF6Q96DU3 332 aa6.78□□□□□ -1.32
UBR1-202ENST00000546274 PBOV1Q9GZY1 135 aa6.78□□□□□ -1.32
UBR1-202ENST00000546274 GPR84Q9NQS5 396 aa6.78□□□□□ -1.32
UBR1-202ENST00000546274 FBLN5Q9UBX5 448 aa6.78□□□□□ -1.32
UBR1-202ENST00000546274 BRWD1Q9NSI6 2320 aa6.77□□□□□ -1.33
UBR1-202ENST00000546274 ASXL3Q9C0F0 2248 aa6.77□□□□□ -1.33
UBR1-202ENST00000546274 IGHV1OR15-9A0A0B4J2B8 117 aa6.77□□□□□ -1.33
UBR1-202ENST00000546274 HPNP05981 417 aa6.77□□□□□ -1.33
UBR1-202ENST00000546274 SRFP11831 508 aa6.77□□□□□ -1.33
UBR1-202ENST00000546274 FBLP22087 321 aaKnown RBP6.77□□□□□ -1.33
UBR1-202ENST00000546274 SLAQ13239 276 aa6.77□□□□□ -1.33
UBR1-202ENST00000546274 MSMO1Q15800 293 aa6.77□□□□□ -1.33
UBR1-202ENST00000546274 MORN2Q502X0 79 aa6.77□□□□□ -1.33
UBR1-202ENST00000546274 PLAC9Q5JTB6 97 aa6.77□□□□□ -1.33
UBR1-202ENST00000546274 H1FNTQ75WM6 255 aaPredicted RBP6.77□□□□□ -1.33
UBR1-202ENST00000546274 LGI3Q8N145 548 aa6.77□□□□□ -1.33
UBR1-202ENST00000546274 SLC22A24Q8N4F4 322 aa6.77□□□□□ -1.33
UBR1-202ENST00000546274 CISD2Q8N5K1 135 aaKnown RBP6.77□□□□□ -1.33
UBR1-202ENST00000546274 C11orf40Q8WZ69 217 aa6.77□□□□□ -1.33
UBR1-202ENST00000546274 IMMP2LQ96T52 175 aa6.77□□□□□ -1.33
UBR1-202ENST00000546274 NUDT16L1Q9BRJ7 211 aaKnown RBP6.77□□□□□ -1.33
UBR1-202ENST00000546274 MRPL13Q9BYD1 178 aaKnown RBP6.77□□□□□ -1.33
UBR1-202ENST00000546274 GTSF1LQ9H1H1 148 aa6.77□□□□□ -1.33
UBR1-202ENST00000546274 COPS7AQ9UBW8 275 aa6.77□□□□□ -1.33
UBR1-202ENST00000546274 FBXL7Q9UJT9 491 aa6.77□□□□□ -1.33
UBR1-202ENST00000546274 IGHV3-20A0A0C4DH32 117 aa6.77□□□□□ -1.33
UBR1-202ENST00000546274 SHISA8B8ZZ34 492 aa6.77□□□□□ -1.33
UBR1-202ENST00000546274 NPIPA5E9PKD4 350 aa6.77□□□□□ -1.33
UBR1-202ENST00000546274 NXPH3O95157 252 aa6.77□□□□□ -1.33
UBR1-202ENST00000546274 HBE1P02100 147 aa6.77□□□□□ -1.33
UBR1-202ENST00000546274 BCL2P10415 239 aa6.77□□□□□ -1.33
UBR1-202ENST00000546274 ZNF17P17021 662 aa6.77□□□□□ -1.33
UBR1-202ENST00000546274 S100GP29377 79 aa6.77□□□□□ -1.33
UBR1-202ENST00000546274 DAP3P51398 398 aaKnown RBP6.77□□□□□ -1.33
UBR1-202ENST00000546274 CRYBA4P53673 196 aa6.77□□□□□ -1.33
UBR1-202ENST00000546274 FBXW4P57775 412 aa6.77□□□□□ -1.33
UBR1-202ENST00000546274 OR1D5P58170 312 aa6.77□□□□□ -1.33
UBR1-202ENST00000546274 ZNF266Q14584 549 aa6.77□□□□□ -1.33
UBR1-202ENST00000546274 CNN3Q15417 329 aaKnown RBP6.77□□□□□ -1.33
UBR1-202ENST00000546274 TESK1Q15569 626 aa6.77□□□□□ -1.33
UBR1-202ENST00000546274 SHISA6Q6ZSJ9 500 aa6.77□□□□□ -1.33
UBR1-202ENST00000546274 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.77□□□□□ -1.33
UBR1-202ENST00000546274 SULF2Q8IWU5 870 aa6.77□□□□□ -1.33
UBR1-202ENST00000546274 C1orf174Q8IYL3 243 aa6.77□□□□□ -1.33
UBR1-202ENST00000546274 DTWD2Q8NBA8 298 aa6.77□□□□□ -1.33
UBR1-202ENST00000546274 EMC6Q9BV81 110 aa6.77□□□□□ -1.33
UBR1-202ENST00000546274 BANF2Q9H503 90 aa6.77□□□□□ -1.33
UBR1-202ENST00000546274 CENPMQ9NSP4 180 aa6.77□□□□□ -1.33
UBR1-202ENST00000546274 WNT16Q9UBV4 365 aa6.77□□□□□ -1.33
UBR1-202ENST00000546274 TUBD1Q9UJT1 453 aa6.77□□□□□ -1.33
UBR1-202ENST00000546274 NPIPA1Q9UND3 350 aa6.77□□□□□ -1.33
UBR1-202ENST00000546274 VDAC3Q9Y277 283 aa6.77□□□□□ -1.33
UBR1-202ENST00000546274 PRR33A8MZF0 331 aa6.76□□□□□ -1.33
UBR1-202ENST00000546274 RAD51DO75771 328 aa6.76□□□□□ -1.33
UBR1-202ENST00000546274 TOX4O94842 621 aa6.76□□□□□ -1.33
UBR1-202ENST00000546274 MPIG6BO95866 241 aa6.76□□□□□ -1.33
UBR1-202ENST00000546274 IL3RAP26951 378 aa6.76□□□□□ -1.33
UBR1-202ENST00000546274 GNMTQ14749 295 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms