RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 ZNF554Q86TJ5 538 aa13.24□□□□□ -0.29
LIMS2-217ENST00000545738 ABHD12Q8N2K0 398 aa13.24□□□□□ -0.29
LIMS2-217ENST00000545738 ZNF439Q8NDP4 499 aa13.24□□□□□ -0.29
LIMS2-217ENST00000545738 OR11H6Q8NGC7 330 aa13.24□□□□□ -0.29
LIMS2-217ENST00000545738 OR52I2Q8NH67 350 aa13.24□□□□□ -0.29
LIMS2-217ENST00000545738 KLK11Q9UBX7 282 aa13.24□□□□□ -0.29
LIMS2-217ENST00000545738 SPINT2O43291 252 aa13.23□□□□□ -0.29
LIMS2-217ENST00000545738 CD34P28906 385 aa13.23□□□□□ -0.29
LIMS2-217ENST00000545738 PRSS3P35030 304 aa13.23□□□□□ -0.29
LIMS2-217ENST00000545738 GNG10P50151 68 aa13.23□□□□□ -0.29
LIMS2-217ENST00000545738 UBE2E1P51965 193 aa13.23□□□□□ -0.29
LIMS2-217ENST00000545738 IL18Q14116 193 aa13.23□□□□□ -0.29
LIMS2-217ENST00000545738 GPR157Q5UAW9 335 aa13.23□□□□□ -0.29
LIMS2-217ENST00000545738 ZNF626Q68DY1 528 aa13.23□□□□□ -0.29
LIMS2-217ENST00000545738 TRAT1Q6PIZ9 186 aa13.23□□□□□ -0.29
LIMS2-217ENST00000545738 HOGA1Q86XE5 327 aa13.23□□□□□ -0.29
LIMS2-217ENST00000545738 LURAP1LQ8IV03 231 aa13.23□□□□□ -0.29
LIMS2-217ENST00000545738 DYNAPQ8N1N2 210 aa13.23□□□□□ -0.29
LIMS2-217ENST00000545738 OR4P4Q8NGL7 312 aa13.23□□□□□ -0.29
LIMS2-217ENST00000545738 OR2S2Q9NQN1 319 aa13.23□□□□□ -0.29
LIMS2-217ENST00000545738 KCNIP1Q9NZI2 227 aa13.23□□□□□ -0.29
LIMS2-217ENST00000545738 NUP50Q9UKX7 468 aa13.23□□□□□ -0.29
LIMS2-217ENST00000545738 JMJD1CQ15652 2540 aa13.23□□□□□ -0.29
LIMS2-217ENST00000545738 hCG_1809904A0A1W2PP81 198 aa13.22□□□□□ -0.29
LIMS2-217ENST00000545738 A0A1W2PPE2 198 aa13.22□□□□□ -0.29
LIMS2-217ENST00000545738 A0A1W2PR64 198 aa13.22□□□□□ -0.29
LIMS2-217ENST00000545738 A0A1W2PRV1 198 aa13.22□□□□□ -0.29
LIMS2-217ENST00000545738 LANCL1O43813 399 aa13.22□□□□□ -0.29
LIMS2-217ENST00000545738 LPLP06858 475 aa13.22□□□□□ -0.29
LIMS2-217ENST00000545738 SAA4P35542 130 aa13.22□□□□□ -0.29
LIMS2-217ENST00000545738 SRSF7Q16629 238 aaKnown RBP eCLIP13.22□□□□□ -0.29
LIMS2-217ENST00000545738 TUSC1Q2TAM9 212 aa13.22□□□□□ -0.29
LIMS2-217ENST00000545738 NCR3LG1Q68D85 454 aa13.22□□□□□ -0.29
LIMS2-217ENST00000545738 LDLRAD3Q86YD5 345 aa13.22□□□□□ -0.29
LIMS2-217ENST00000545738 LYSMD2Q8IV50 215 aa13.22□□□□□ -0.29
LIMS2-217ENST00000545738 BEST4Q8NFU0 473 aa13.22□□□□□ -0.29
LIMS2-217ENST00000545738 OR10A7Q8NGE5 316 aa13.22□□□□□ -0.29
LIMS2-217ENST00000545738 GALMQ96C23 342 aa13.22□□□□□ -0.29
LIMS2-217ENST00000545738 ZNF48Q96MX3 618 aaPredicted RBP13.22□□□□□ -0.29
LIMS2-217ENST00000545738 CABLES2Q9BTV7 478 aa13.22□□□□□ -0.29
LIMS2-217ENST00000545738 CLEC7AQ9BXN2 247 aa13.22□□□□□ -0.29
LIMS2-217ENST00000545738 BEX2Q9BXY8 128 aa13.22□□□□□ -0.29
LIMS2-217ENST00000545738 SLC23A1Q9UHI7 598 aa13.22□□□□□ -0.29
LIMS2-217ENST00000545738 A0A0U1RQK1 487 aa13.22□□□□□ -0.29
LIMS2-217ENST00000545738 FABP12A6NFH5 140 aa13.22□□□□□ -0.29
LIMS2-217ENST00000545738 POM121CA8CG34 1229 aa13.22□□□□□ -0.29
LIMS2-217ENST00000545738 NPFFO15130 113 aa13.22□□□□□ -0.29
LIMS2-217ENST00000545738 CRLF1O75462 422 aa13.22□□□□□ -0.29
LIMS2-217ENST00000545738 HTD2P86397 168 aa13.22□□□□□ -0.29
LIMS2-217ENST00000545738 DIAPH2-AS1Q14236 149 aa13.22□□□□□ -0.29
LIMS2-217ENST00000545738 MORN2Q502X0 79 aa13.22□□□□□ -0.29
LIMS2-217ENST00000545738 OR52M1Q8NGK5 317 aa13.22□□□□□ -0.29
LIMS2-217ENST00000545738 HEXA-AS1Q9H8Q6 139 aa13.22□□□□□ -0.29
LIMS2-217ENST00000545738 PTTG2Q9NZH5 202 aa13.22□□□□□ -0.29
LIMS2-217ENST00000545738 ANXA10Q9UJ72 324 aa13.22□□□□□ -0.29
LIMS2-217ENST00000545738 CDC42EP3Q9UKI2 254 aa13.22□□□□□ -0.29
LIMS2-217ENST00000545738 BET1O15155 118 aa13.21□□□□□ -0.3
LIMS2-217ENST00000545738 ARG1P05089 322 aa13.21□□□□□ -0.3
LIMS2-217ENST00000545738 EPHA1P21709 976 aa13.21□□□□□ -0.3
LIMS2-217ENST00000545738 S100A5P33763 92 aa13.21□□□□□ -0.3
LIMS2-217ENST00000545738 ETV6P41212 452 aa13.21□□□□□ -0.3
LIMS2-217ENST00000545738 CT45A1Q5HYN5 189 aa13.21□□□□□ -0.3
LIMS2-217ENST00000545738 PYHIN1Q6K0P9 492 aa13.21□□□□□ -0.3
LIMS2-217ENST00000545738 FAM131AQ6UXB0 335 aa13.21□□□□□ -0.3
LIMS2-217ENST00000545738 OR4A4PQ8NGN8 299 aa13.21□□□□□ -0.3
LIMS2-217ENST00000545738 OR13D1Q8NGV5 346 aa13.21□□□□□ -0.3
LIMS2-217ENST00000545738 CT45A3Q8NHU0 189 aa13.21□□□□□ -0.3
LIMS2-217ENST00000545738 RBMXL1Q96E39 390 aaKnown RBP13.21□□□□□ -0.3
LIMS2-217ENST00000545738 SDHCQ99643 169 aaPredicted RBP13.21□□□□□ -0.3
LIMS2-217ENST00000545738 GNG12Q9UBI6 72 aa13.21□□□□□ -0.3
LIMS2-217ENST00000545738 JPT1Q9UK76 154 aa13.21□□□□□ -0.3
LIMS2-217ENST00000545738 TRBV6-7A0A0A0MS04 114 aa13.2□□□□□ -0.3
LIMS2-217ENST00000545738 J3QR06 171 aa13.2□□□□□ -0.3
LIMS2-217ENST00000545738 ATP6V1G1O75348 118 aa13.2□□□□□ -0.3
LIMS2-217ENST00000545738 NAT1P18440 290 aa13.2□□□□□ -0.3
LIMS2-217ENST00000545738 SRP14P37108 136 aaKnown RBP13.2□□□□□ -0.3
LIMS2-217ENST00000545738 KIR2DS4P43632 304 aa13.2□□□□□ -0.3
LIMS2-217ENST00000545738 KIR2DS1Q14954 304 aa13.2□□□□□ -0.3
LIMS2-217ENST00000545738 HLA-DRB5Q30154 266 aa13.2□□□□□ -0.3
LIMS2-217ENST00000545738 CHRFAM7AQ494W8 412 aa13.2□□□□□ -0.3
LIMS2-217ENST00000545738 MFSD4AQ8N468 514 aa13.2□□□□□ -0.3
LIMS2-217ENST00000545738 SMIM4Q8WVI0 70 aa13.2□□□□□ -0.3
LIMS2-217ENST00000545738 SCPEP1Q9HB40 452 aa13.2□□□□□ -0.3
LIMS2-217ENST00000545738 MGAT4AQ9UM21 535 aa13.2□□□□□ -0.3
LIMS2-217ENST00000545738 TPPPO94811 219 aa13.19□□□□□ -0.3
LIMS2-217ENST00000545738 SRD5A1P18405 259 aa13.19□□□□□ -0.3
LIMS2-217ENST00000545738 C9orf139Q6ZV77 190 aa13.19□□□□□ -0.3
LIMS2-217ENST00000545738 OR9G1Q8NH87 305 aa13.19□□□□□ -0.3
LIMS2-217ENST00000545738 ZNF596Q8TC21 504 aa13.19□□□□□ -0.3
LIMS2-217ENST00000545738 SLC6A7Q99884 636 aa13.19□□□□□ -0.3
LIMS2-217ENST00000545738 PAIP2BQ9ULR5 123 aaKnown RBP13.19□□□□□ -0.3
LIMS2-217ENST00000545738 GABARAPH6UMI1 98 aa13.19□□□□□ -0.3
LIMS2-217ENST00000545738 CTDSPLO15194 276 aa13.19□□□□□ -0.3
LIMS2-217ENST00000545738 YPEL1O60688 119 aa13.19□□□□□ -0.3
LIMS2-217ENST00000545738 HNF1AP20823 631 aa13.19□□□□□ -0.3
LIMS2-217ENST00000545738 HLA-DMAP28067 261 aa13.19□□□□□ -0.3
LIMS2-217ENST00000545738 CEACAM6P40199 344 aa13.19□□□□□ -0.3
LIMS2-217ENST00000545738 DEFB112Q30KQ8 113 aa13.19□□□□□ -0.3
LIMS2-217ENST00000545738 SLC25A48Q6ZT89 311 aaKnown RBP13.19□□□□□ -0.3
LIMS2-217ENST00000545738 ODF3L1Q8IXM7 274 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms