RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 IFNA5P01569 189 aa13.41□□□□□ -0.26
LDLR-204ENST00000545707 IGKV1-5P01602 117 aa13.41□□□□□ -0.26
LDLR-204ENST00000545707 MAS1LP35410 378 aa13.41□□□□□ -0.26
LDLR-204ENST00000545707 RAB11AP62491 216 aa13.41□□□□□ -0.26
LDLR-204ENST00000545707 GNG3P63215 75 aa13.41□□□□□ -0.26
LDLR-204ENST00000545707 TVP23CQ96ET8 276 aa13.41□□□□□ -0.26
LDLR-204ENST00000545707 KCNS2Q9ULS6 477 aa13.41□□□□□ -0.26
LDLR-204ENST00000545707 KIAA2026Q5HYC2 2103 aa13.4□□□□□ -0.26
LDLR-204ENST00000545707 TRBV23-1A0A0A0MS06 115 aa13.4□□□□□ -0.26
LDLR-204ENST00000545707 IFITM10A6NMD0 228 aa13.4□□□□□ -0.26
LDLR-204ENST00000545707 MT-CO3P00414 261 aa13.4□□□□□ -0.26
LDLR-204ENST00000545707 HSPB1P04792 205 aaKnown RBP13.4□□□□□ -0.26
LDLR-204ENST00000545707 CEACAM1P13688 526 aa13.4□□□□□ -0.26
LDLR-204ENST00000545707 MMP9P14780 707 aa13.4□□□□□ -0.26
LDLR-204ENST00000545707 APLNRP35414 380 aa13.4□□□□□ -0.26
LDLR-204ENST00000545707 TESK1Q15569 626 aa13.4□□□□□ -0.26
LDLR-204ENST00000545707 FAM53AQ6NSI3 398 aaPredicted RBP13.4□□□□□ -0.26
LDLR-204ENST00000545707 ZNF573Q86YE8 665 aa13.4□□□□□ -0.26
LDLR-204ENST00000545707 OR8G5Q8NG78 346 aa13.4□□□□□ -0.26
LDLR-204ENST00000545707 IL22RA2Q969J5 263 aa13.4□□□□□ -0.26
LDLR-204ENST00000545707 UNKLQ9H9P5 680 aaKnown RBP13.4□□□□□ -0.26
LDLR-204ENST00000545707 B4GALT7Q9UBV7 327 aa13.4□□□□□ -0.26
LDLR-204ENST00000545707 MED12LQ86YW9 2145 aa13.4□□□□□ -0.26
LDLR-204ENST00000545707 A0A1B0GU03 582 aa13.4□□□□□ -0.26
LDLR-204ENST00000545707 A0A1W2PNU3 283 aaPredicted RBP13.4□□□□□ -0.26
LDLR-204ENST00000545707 COX5BP10606 129 aa13.4□□□□□ -0.26
LDLR-204ENST00000545707 ARR3P36575 388 aa13.4□□□□□ -0.26
LDLR-204ENST00000545707 ZNF726P1Q15940 193 aa13.4□□□□□ -0.26
LDLR-204ENST00000545707 PEAR1Q5VY43 1037 aaPredicted RBP13.4□□□□□ -0.26
LDLR-204ENST00000545707 HAPLN4Q86UW8 402 aa13.4□□□□□ -0.26
LDLR-204ENST00000545707 UBALD2Q8IYN6 164 aa13.4□□□□□ -0.26
LDLR-204ENST00000545707 CDX2Q99626 313 aaPredicted RBP13.4□□□□□ -0.26
LDLR-204ENST00000545707 RIMS4Q9H426 269 aaPredicted RBP13.4□□□□□ -0.26
LDLR-204ENST00000545707 CYB5BO43169 146 aa13.39□□□□□ -0.27
LDLR-204ENST00000545707 S100GP29377 79 aa13.39□□□□□ -0.27
LDLR-204ENST00000545707 Q6P435 159 aa13.39□□□□□ -0.27
LDLR-204ENST00000545707 WDR86Q86TI4 376 aa13.39□□□□□ -0.27
LDLR-204ENST00000545707 MCEMP1Q8IX19 187 aa13.39□□□□□ -0.27
LDLR-204ENST00000545707 EDARADDQ8WWZ3 215 aa13.39□□□□□ -0.27
LDLR-204ENST00000545707 OR51I2Q9H344 312 aa13.39□□□□□ -0.27
LDLR-204ENST00000545707 PSENENQ9NZ42 101 aa13.39□□□□□ -0.27
LDLR-204ENST00000545707 TRAPPC2LQ9UL33 140 aa13.39□□□□□ -0.27
LDLR-204ENST00000545707 SYNGR2O43760 224 aa13.39□□□□□ -0.27
LDLR-204ENST00000545707 IL18BPO95998 194 aa13.39□□□□□ -0.27
LDLR-204ENST00000545707 CELA3BP08861 270 aa13.39□□□□□ -0.27
LDLR-204ENST00000545707 ERVS71-1P61550 626 aa13.39□□□□□ -0.27
LDLR-204ENST00000545707 CLN3Q13286 438 aa13.39□□□□□ -0.27
LDLR-204ENST00000545707 ALKBH6Q3KRA9 238 aa13.39□□□□□ -0.27
LDLR-204ENST00000545707 ZNF585BQ52M93 769 aa13.39□□□□□ -0.27
LDLR-204ENST00000545707 ZNF880Q6PDB4 577 aa13.39□□□□□ -0.27
LDLR-204ENST00000545707 SPNS3Q6ZMD2 512 aa13.39□□□□□ -0.27
LDLR-204ENST00000545707 MDP1Q86V88 176 aa13.39□□□□□ -0.27
LDLR-204ENST00000545707 C1QL4Q86Z23 238 aa13.39□□□□□ -0.27
LDLR-204ENST00000545707 SNIP1Q8TAD8 396 aaKnown RBP13.39□□□□□ -0.27
LDLR-204ENST00000545707 RBMXL1Q96E39 390 aaKnown RBP13.39□□□□□ -0.27
LDLR-204ENST00000545707 PLK3Q9H4B4 646 aa13.39□□□□□ -0.27
LDLR-204ENST00000545707 DOK5Q9P104 306 aa13.39□□□□□ -0.27
LDLR-204ENST00000545707 LOC102723971A0A1B0GUV8 181 aa13.38□□□□□ -0.27
LDLR-204ENST00000545707 DFFBO76075 338 aa13.38□□□□□ -0.27
LDLR-204ENST00000545707 CEBPDP49716 269 aaPredicted RBP13.38□□□□□ -0.27
LDLR-204ENST00000545707 RNPS1Q15287 305 aaKnown RBP13.38□□□□□ -0.27
LDLR-204ENST00000545707 PDZD11Q5EBL8 140 aa13.38□□□□□ -0.27
LDLR-204ENST00000545707 SPANXN5Q5MJ07 72 aa13.38□□□□□ -0.27
LDLR-204ENST00000545707 CDPF1Q6NVV7 123 aa13.38□□□□□ -0.27
LDLR-204ENST00000545707 SCGB1C1Q8TD33 95 aa13.38□□□□□ -0.27
LDLR-204ENST00000545707 DEFB127Q9H1M4 99 aa13.38□□□□□ -0.27
LDLR-204ENST00000545707 RNF150Q9ULK6 438 aa13.38□□□□□ -0.27
LDLR-204ENST00000545707 OR2H2O95918 312 aa13.38□□□□□ -0.27
LDLR-204ENST00000545707 TRGC2P03986 189 aa13.38□□□□□ -0.27
LDLR-204ENST00000545707 ACP1P24666 158 aa13.38□□□□□ -0.27
LDLR-204ENST00000545707 CD200P41217 278 aa13.38□□□□□ -0.27
LDLR-204ENST00000545707 ELLP55199 621 aaPredicted RBP13.38□□□□□ -0.27
LDLR-204ENST00000545707 KHDC3LQ587J8 217 aa13.38□□□□□ -0.27
LDLR-204ENST00000545707 OR2B11Q5JQS5 317 aa13.38□□□□□ -0.27
LDLR-204ENST00000545707 ZNF787Q6DD87 383 aa13.38□□□□□ -0.27
LDLR-204ENST00000545707 RAB40CQ96S21 281 aa13.38□□□□□ -0.27
LDLR-204ENST00000545707 TCEAL7Q9BRU2 100 aa13.38□□□□□ -0.27
LDLR-204ENST00000545707 CABLES2Q9BTV7 478 aa13.38□□□□□ -0.27
LDLR-204ENST00000545707 OR51M1Q9H341 326 aa13.38□□□□□ -0.27
LDLR-204ENST00000545707 PRO3102Q9H379 93 aa13.38□□□□□ -0.27
LDLR-204ENST00000545707 MPC1Q9Y5U8 109 aa13.38□□□□□ -0.27
LDLR-204ENST00000545707 TNRC6AQ8NDV7 1962 aaKnown RBP13.37□□□□□ -0.27
LDLR-204ENST00000545707 SPENQ96T58 3664 aaKnown RBP13.37□□□□□ -0.27
LDLR-204ENST00000545707 HBE1P02100 147 aa13.37□□□□□ -0.27
LDLR-204ENST00000545707 HOXA5P20719 270 aa13.37□□□□□ -0.27
LDLR-204ENST00000545707 RAB2AP61019 212 aa13.37□□□□□ -0.27
LDLR-204ENST00000545707 OR8G1Q15617 311 aa13.37□□□□□ -0.27
LDLR-204ENST00000545707 GFI1BQ5VTD9 330 aa13.37□□□□□ -0.27
LDLR-204ENST00000545707 FAM90A2PQ658T7 463 aa13.37□□□□□ -0.27
LDLR-204ENST00000545707 BEND4Q6ZU67 534 aa13.37□□□□□ -0.27
LDLR-204ENST00000545707 ZNF525Q8N782 197 aa13.37□□□□□ -0.27
LDLR-204ENST00000545707 GTF3AQ92664 365 aaKnown RBP13.37□□□□□ -0.27
LDLR-204ENST00000545707 GGACTQ9BVM4 153 aa13.37□□□□□ -0.27
LDLR-204ENST00000545707 SPRY4Q9C004 299 aa13.37□□□□□ -0.27
LDLR-204ENST00000545707 TMPRSS5Q9H3S3 457 aa13.37□□□□□ -0.27
LDLR-204ENST00000545707 OR14J1Q9UGF5 321 aa13.37□□□□□ -0.27
LDLR-204ENST00000545707 TRBV6-6A0A0A6YYG2 114 aa13.37□□□□□ -0.27
LDLR-204ENST00000545707 OR5B21A6NL26 309 aa13.37□□□□□ -0.27
LDLR-204ENST00000545707 CDIPTO14735 213 aa13.37□□□□□ -0.27
LDLR-204ENST00000545707 HMGB3O15347 200 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms