RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 FRRS1LQ9P0K9 344 aa11.71□□□□□ -0.53
CLSTN3-216ENST00000545663 ENPP5Q9UJA9 477 aa11.71□□□□□ -0.53
CLSTN3-216ENST00000545663 A0A087WXM4 84 aa11.7□□□□□ -0.54
CLSTN3-216ENST00000545663 A0A1W2PPE3 182 aa11.7□□□□□ -0.54
CLSTN3-216ENST00000545663 OR4C45A6NMZ5 311 aa11.7□□□□□ -0.54
CLSTN3-216ENST00000545663 SIRPB1O00241 398 aa11.7□□□□□ -0.54
CLSTN3-216ENST00000545663 MT-ND2P03891 347 aa11.7□□□□□ -0.54
CLSTN3-216ENST00000545663 CD2P06729 351 aa11.7□□□□□ -0.54
CLSTN3-216ENST00000545663 SOX6P35712 828 aa11.7□□□□□ -0.54
CLSTN3-216ENST00000545663 PTGFRP43088 359 aa11.7□□□□□ -0.54
CLSTN3-216ENST00000545663 RAB7AP51149 207 aa11.7□□□□□ -0.54
CLSTN3-216ENST00000545663 F2RL1P55085 397 aa11.7□□□□□ -0.54
CLSTN3-216ENST00000545663 MED22Q15528 200 aa11.7□□□□□ -0.54
CLSTN3-216ENST00000545663 TRAM1Q15629 374 aa11.7□□□□□ -0.54
CLSTN3-216ENST00000545663 ZNF367Q7RTV3 350 aa11.7□□□□□ -0.54
CLSTN3-216ENST00000545663 GTSCR1Q86UQ5 136 aa11.7□□□□□ -0.54
CLSTN3-216ENST00000545663 PRSS35Q8N3Z0 413 aa11.7□□□□□ -0.54
CLSTN3-216ENST00000545663 MS4A15Q8N5U1 240 aa11.7□□□□□ -0.54
CLSTN3-216ENST00000545663 ZNF485Q8NCK3 441 aa11.7□□□□□ -0.54
CLSTN3-216ENST00000545663 GPR148Q8TDV2 347 aa11.7□□□□□ -0.54
CLSTN3-216ENST00000545663 KIRREL1Q96J84 757 aa11.7□□□□□ -0.54
CLSTN3-216ENST00000545663 CHCHD6Q9BRQ6 235 aa11.7□□□□□ -0.54
CLSTN3-216ENST00000545663 ELOVL1Q9BW60 279 aa11.7□□□□□ -0.54
CLSTN3-216ENST00000545663 PKIBQ9C010 78 aa11.7□□□□□ -0.54
CLSTN3-216ENST00000545663 SIGLEC8Q9NYZ4 499 aa11.7□□□□□ -0.54
CLSTN3-216ENST00000545663 PSG11Q9UQ72 335 aa11.7□□□□□ -0.54
CLSTN3-216ENST00000545663 AMMECR1Q9Y4X0 333 aaPredicted RBP11.7□□□□□ -0.54
CLSTN3-216ENST00000545663 FAM230AA0A1W2PPH8 454 aa11.69□□□□□ -0.54
CLSTN3-216ENST00000545663 IZUMO1RA6ND01 250 aa11.69□□□□□ -0.54
CLSTN3-216ENST00000545663 ZNF736B4DX44 427 aaPredicted RBP11.69□□□□□ -0.54
CLSTN3-216ENST00000545663 GATBO75879 557 aaKnown RBP11.69□□□□□ -0.54
CLSTN3-216ENST00000545663 PSMA1P25786 263 aaKnown RBP11.69□□□□□ -0.54
CLSTN3-216ENST00000545663 GNG10P50151 68 aa11.69□□□□□ -0.54
CLSTN3-216ENST00000545663 MLLT11Q13015 90 aaPredicted RBP11.69□□□□□ -0.54
CLSTN3-216ENST00000545663 YIF1BQ5BJH7 314 aa11.69□□□□□ -0.54
CLSTN3-216ENST00000545663 CLVS2Q5SYC1 327 aa11.69□□□□□ -0.54
CLSTN3-216ENST00000545663 TMEM42Q69YG0 159 aa11.69□□□□□ -0.54
CLSTN3-216ENST00000545663 DMKNQ6E0U4 476 aaPredicted RBP11.69□□□□□ -0.54
CLSTN3-216ENST00000545663 OR2T10Q8NGZ9 312 aa11.69□□□□□ -0.54
CLSTN3-216ENST00000545663 PP6455Q8WZ26 134 aa11.69□□□□□ -0.54
CLSTN3-216ENST00000545663 UFD1Q92890 307 aa11.69□□□□□ -0.54
CLSTN3-216ENST00000545663 EMG1Q92979 244 aaKnown RBP11.69□□□□□ -0.54
CLSTN3-216ENST00000545663 V9GYS6 101 aa11.69□□□□□ -0.54
CLSTN3-216ENST00000545663 IGKV1-27A0A075B6S5 117 aa11.68□□□□□ -0.54
CLSTN3-216ENST00000545663 IGHV1-3A0A0C4DH29 117 aa11.68□□□□□ -0.54
CLSTN3-216ENST00000545663 LOC107986453A0A1B0GWG9 222 aa11.68□□□□□ -0.54
CLSTN3-216ENST00000545663 FAM90A10PA6NDY2 464 aa11.68□□□□□ -0.54
CLSTN3-216ENST00000545663 RGS11O94810 467 aa11.68□□□□□ -0.54
CLSTN3-216ENST00000545663 IGHV3-11P01762 117 aa11.68□□□□□ -0.54
CLSTN3-216ENST00000545663 LGALS1P09382 135 aaKnown RBP11.68□□□□□ -0.54
CLSTN3-216ENST00000545663 OR5H8P0DN80 308 aa11.68□□□□□ -0.54
CLSTN3-216ENST00000545663 MAPK3P27361 379 aaPredicted RBP11.68□□□□□ -0.54
CLSTN3-216ENST00000545663 NPBWR2P48146 333 aa11.68□□□□□ -0.54
CLSTN3-216ENST00000545663 NANOS3P60323 173 aaKnown RBP11.68□□□□□ -0.54
CLSTN3-216ENST00000545663 ACOT13Q9NPJ3 140 aa11.68□□□□□ -0.54
CLSTN3-216ENST00000545663 RBFOX1Q9NWB1 397 aaKnown RBP11.68□□□□□ -0.54
CLSTN3-216ENST00000545663 LSM2Q9Y333 95 aaKnown RBP11.68□□□□□ -0.54
CLSTN3-216ENST00000545663 KLK5Q9Y337 293 aaPredicted RBP11.68□□□□□ -0.54
CLSTN3-216ENST00000545663 A0A1B0GTI1 187 aa11.67□□□□□ -0.54
CLSTN3-216ENST00000545663 SHISA3A0PJX4 238 aa11.67□□□□□ -0.54
CLSTN3-216ENST00000545663 ODAMA1E959 279 aa11.67□□□□□ -0.54
CLSTN3-216ENST00000545663 CNIH1O95406 144 aa11.67□□□□□ -0.54
CLSTN3-216ENST00000545663 SLC2A2P11168 524 aaPredicted RBP11.67□□□□□ -0.54
CLSTN3-216ENST00000545663 ZNF20P17024 532 aa11.67□□□□□ -0.54
CLSTN3-216ENST00000545663 CELP19835 753 aa11.67□□□□□ -0.54
CLSTN3-216ENST00000545663 TPBGQ13641 420 aa11.67□□□□□ -0.54
CLSTN3-216ENST00000545663 LTC4SQ16873 150 aa11.67□□□□□ -0.54
CLSTN3-216ENST00000545663 SLC25A26Q70HW3 274 aa11.67□□□□□ -0.54
CLSTN3-216ENST00000545663 IZUMO1Q8IYV9 350 aa11.67□□□□□ -0.54
CLSTN3-216ENST00000545663 SPARTQ8N0X7 666 aa11.67□□□□□ -0.54
CLSTN3-216ENST00000545663 DEFB125Q8N687 156 aa11.67□□□□□ -0.54
CLSTN3-216ENST00000545663 TSPAN14Q8NG11 270 aa11.67□□□□□ -0.54
CLSTN3-216ENST00000545663 OR14K1Q8NGZ2 314 aa11.67□□□□□ -0.54
CLSTN3-216ENST00000545663 GHSRQ92847 366 aa11.67□□□□□ -0.54
CLSTN3-216ENST00000545663 CPNE2Q96FN4 548 aaPredicted RBP11.67□□□□□ -0.54
CLSTN3-216ENST00000545663 MGLLQ99685 303 aa11.67□□□□□ -0.54
CLSTN3-216ENST00000545663 WFDC10AQ9H1F0 79 aa11.67□□□□□ -0.54
CLSTN3-216ENST00000545663 GLS2Q9UI32 602 aa11.67□□□□□ -0.54
CLSTN3-216ENST00000545663 ZNF107Q9UII5 783 aaPredicted RBP11.67□□□□□ -0.54
CLSTN3-216ENST00000545663 ZNF580Q9UK33 172 aa11.67□□□□□ -0.54
CLSTN3-216ENST00000545663 DHDHQ9UQ10 334 aa11.67□□□□□ -0.54
CLSTN3-216ENST00000545663 A0A0J9YWU9 116 aa11.66□□□□□ -0.54
CLSTN3-216ENST00000545663 E9PI62 339 aa11.66□□□□□ -0.54
CLSTN3-216ENST00000545663 HSD17B6O14756 317 aa11.66□□□□□ -0.54
CLSTN3-216ENST00000545663 HSMCR30P0CW71 290 aa11.66□□□□□ -0.54
CLSTN3-216ENST00000545663 GTF2A1P52655 376 aaPredicted RBP11.66□□□□□ -0.54
CLSTN3-216ENST00000545663 UBE2UQ5VVX9 321 aa11.66□□□□□ -0.54
CLSTN3-216ENST00000545663 IL34Q6ZMJ4 242 aa11.66□□□□□ -0.54
CLSTN3-216ENST00000545663 UTS2BQ765I0 119 aa11.66□□□□□ -0.54
CLSTN3-216ENST00000545663 SERPINA12Q8IW75 414 aa11.66□□□□□ -0.54
CLSTN3-216ENST00000545663 OR5D14Q8NGL3 314 aa11.66□□□□□ -0.54
CLSTN3-216ENST00000545663 OR13C3Q8NGS6 347 aa11.66□□□□□ -0.54
CLSTN3-216ENST00000545663 TSEN15Q8WW01 171 aaKnown RBP11.66□□□□□ -0.54
CLSTN3-216ENST00000545663 PHYHIPQ92561 330 aa11.66□□□□□ -0.54
CLSTN3-216ENST00000545663 COQ2Q96H96 371 aa11.66□□□□□ -0.54
CLSTN3-216ENST00000545663 OVOL2Q9BRP0 275 aa11.66□□□□□ -0.54
CLSTN3-216ENST00000545663 PPIL3Q9H2H8 161 aaKnown RBP11.66□□□□□ -0.54
CLSTN3-216ENST00000545663 SEBOXQ9HB31 216 aaPredicted RBP11.66□□□□□ -0.54
CLSTN3-216ENST00000545663 OR6C3Q9NZP0 311 aa11.66□□□□□ -0.54
CLSTN3-216ENST00000545663 CKLFQ9UBR5 152 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms