RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 PRSS22Q9GZN4 317 aa6.14□□□□□ -1.43
SNHG1-223ENST00000545440 VCX3BQ9H321 246 aa6.14□□□□□ -1.43
SNHG1-223ENST00000545440 SERTAD4Q9NUC0 356 aa6.14□□□□□ -1.43
SNHG1-223ENST00000545440 IDI2-AS1Q9NZ38 188 aa6.14□□□□□ -1.43
SNHG1-223ENST00000545440 ZNF581Q9P0T4 197 aa6.14□□□□□ -1.43
SNHG1-223ENST00000545440 RCC2Q9P258 522 aaKnown RBP6.14□□□□□ -1.43
SNHG1-223ENST00000545440 NKX1-2Q9UD57 310 aaPredicted RBP6.14□□□□□ -1.43
SNHG1-223ENST00000545440 ING4Q9UNL4 249 aa6.14□□□□□ -1.43
SNHG1-223ENST00000545440 MRPS28Q9Y2Q9 187 aaKnown RBP6.14□□□□□ -1.43
SNHG1-223ENST00000545440 LSM2Q9Y333 95 aaKnown RBP6.14□□□□□ -1.43
SNHG1-223ENST00000545440 A0A1W2PP11 408 aa6.13□□□□□ -1.43
SNHG1-223ENST00000545440 C15orf65H3BRN8 121 aa6.13□□□□□ -1.43
SNHG1-223ENST00000545440 J3QR06 171 aa6.13□□□□□ -1.43
SNHG1-223ENST00000545440 M0QZK8 103 aa6.13□□□□□ -1.43
SNHG1-223ENST00000545440 PIN1P1O15428 100 aa6.13□□□□□ -1.43
SNHG1-223ENST00000545440 OR2F2O95006 317 aa6.13□□□□□ -1.43
SNHG1-223ENST00000545440 MAS1P04201 325 aa6.13□□□□□ -1.43
SNHG1-223ENST00000545440 MYF6P23409 242 aa6.13□□□□□ -1.43
SNHG1-223ENST00000545440 SLC35A2P78381 396 aa6.13□□□□□ -1.43
SNHG1-223ENST00000545440 GABPB1Q06547 395 aaPredicted RBP6.13□□□□□ -1.43
SNHG1-223ENST00000545440 MADCAM1Q13477 382 aa6.13□□□□□ -1.43
SNHG1-223ENST00000545440 GPR50Q13585 617 aa6.13□□□□□ -1.43
SNHG1-223ENST00000545440 DYRK1AQ13627 763 aa6.13□□□□□ -1.43
SNHG1-223ENST00000545440 RBM39Q14498 530 aaKnown RBP6.13□□□□□ -1.43
SNHG1-223ENST00000545440 SPHARQ15513 63 aa6.13□□□□□ -1.43
SNHG1-223ENST00000545440 TMEM30BQ3MIR4 351 aa6.13□□□□□ -1.43
SNHG1-223ENST00000545440 C6orf141Q5SZD1 244 aa6.13□□□□□ -1.43
SNHG1-223ENST00000545440 UTF1Q5T230 341 aa6.13□□□□□ -1.43
SNHG1-223ENST00000545440 ATAD3CQ5T2N8 411 aa6.13□□□□□ -1.43
SNHG1-223ENST00000545440 MZT2AQ6P582 158 aa6.13□□□□□ -1.43
SNHG1-223ENST00000545440 GLIPR1L1Q6UWM5 242 aa6.13□□□□□ -1.43
SNHG1-223ENST00000545440 ZNF497Q6ZNH5 498 aa6.13□□□□□ -1.43
SNHG1-223ENST00000545440 GAPTQ8N292 157 aa6.13□□□□□ -1.43
SNHG1-223ENST00000545440 MS4A15Q8N5U1 240 aa6.13□□□□□ -1.43
SNHG1-223ENST00000545440 NEK7Q8TDX7 302 aa6.13□□□□□ -1.43
SNHG1-223ENST00000545440 PHYHIPQ92561 330 aa6.13□□□□□ -1.43
SNHG1-223ENST00000545440 TOMM40LQ969M1 308 aa6.13□□□□□ -1.43
SNHG1-223ENST00000545440 RPEQ96AT9 228 aa6.13□□□□□ -1.43
SNHG1-223ENST00000545440 WWC2-AS2Q96NR7 200 aa6.13□□□□□ -1.43
SNHG1-223ENST00000545440 SLC25A33Q9BSK2 321 aa6.13□□□□□ -1.43
SNHG1-223ENST00000545440 ANKRD60Q9BZ19 345 aa6.13□□□□□ -1.43
SNHG1-223ENST00000545440 RAB9BQ9NP90 201 aa6.13□□□□□ -1.43
SNHG1-223ENST00000545440 HEYLQ9NQ87 328 aaPredicted RBP6.13□□□□□ -1.43
SNHG1-223ENST00000545440 SCN3BQ9NY72 215 aa6.13□□□□□ -1.43
SNHG1-223ENST00000545440 GHRLQ9UBU3 117 aa6.13□□□□□ -1.43
SNHG1-223ENST00000545440 CMYA5Q8N3K9 4069 aa6.13□□□□□ -1.43
SNHG1-223ENST00000545440 MEGF8Q7Z7M0 2845 aa6.12□□□□□ -1.43
SNHG1-223ENST00000545440 A0A1W2PPI3 338 aa6.12□□□□□ -1.43
SNHG1-223ENST00000545440 A0A1W2PPK0 400 aa6.12□□□□□ -1.43
SNHG1-223ENST00000545440 MCRIP1C9JLW8 97 aa6.12□□□□□ -1.43
SNHG1-223ENST00000545440 AIPO00170 330 aa6.12□□□□□ -1.43
SNHG1-223ENST00000545440 RAB27BO00194 218 aa6.12□□□□□ -1.43
SNHG1-223ENST00000545440 ORC5O43913 435 aa6.12□□□□□ -1.43
SNHG1-223ENST00000545440 CA11O75493 328 aa6.12□□□□□ -1.43
SNHG1-223ENST00000545440 SC5DO75845 299 aa6.12□□□□□ -1.43
SNHG1-223ENST00000545440 UBBP0CG47 229 aa6.12□□□□□ -1.43
SNHG1-223ENST00000545440 MGMTP16455 207 aa6.12□□□□□ -1.43
SNHG1-223ENST00000545440 GZMHP20718 246 aa6.12□□□□□ -1.43
SNHG1-223ENST00000545440 VDAC2P45880 294 aaPredicted RBP6.12□□□□□ -1.43
SNHG1-223ENST00000545440 HSPA13P48723 471 aa6.12□□□□□ -1.43
SNHG1-223ENST00000545440 RAB7AP51149 207 aa6.12□□□□□ -1.43
SNHG1-223ENST00000545440 BLCAPP62952 87 aa6.12□□□□□ -1.43
SNHG1-223ENST00000545440 IRF3Q14653 427 aa6.12□□□□□ -1.43
SNHG1-223ENST00000545440 MED22Q15528 200 aa6.12□□□□□ -1.43
SNHG1-223ENST00000545440 Q3ZCU0 254 aa6.12□□□□□ -1.43
SNHG1-223ENST00000545440 RAB12Q6IQ22 244 aa6.12□□□□□ -1.43
SNHG1-223ENST00000545440 TRAT1Q6PIZ9 186 aa6.12□□□□□ -1.43
SNHG1-223ENST00000545440 OR8H3Q8N146 312 aa6.12□□□□□ -1.43
SNHG1-223ENST00000545440 C8orf31Q8N9H6 132 aa6.12□□□□□ -1.43
SNHG1-223ENST00000545440 OR52M1Q8NGK5 317 aa6.12□□□□□ -1.43
SNHG1-223ENST00000545440 OR10X1Q8NGY0 326 aa6.12□□□□□ -1.43
SNHG1-223ENST00000545440 CAPSLQ8WWF8 208 aa6.12□□□□□ -1.43
SNHG1-223ENST00000545440 UFD1Q92890 307 aa6.12□□□□□ -1.43
SNHG1-223ENST00000545440 RBM14Q96PK6 669 aaKnown RBP6.12□□□□□ -1.43
SNHG1-223ENST00000545440 OR5M11Q96RB7 305 aa6.12□□□□□ -1.43
SNHG1-223ENST00000545440 CST11Q9H112 138 aa6.12□□□□□ -1.43
SNHG1-223ENST00000545440 DUSP21Q9H596 190 aa6.12□□□□□ -1.43
SNHG1-223ENST00000545440 ETAA1Q9NY74 926 aa6.12□□□□□ -1.43
SNHG1-223ENST00000545440 NOTCH3Q9UM47 2321 aa6.12□□□□□ -1.43
SNHG1-223ENST00000545440 PSG11Q9UQ72 335 aa6.12□□□□□ -1.43
SNHG1-223ENST00000545440 MOB4Q9Y3A3 225 aa6.12□□□□□ -1.43
SNHG1-223ENST00000545440 TPRKBQ9Y3C4 175 aa6.12□□□□□ -1.43
SNHG1-223ENST00000545440 FAM90A9PA6NNJ1 464 aa6.11□□□□□ -1.43
SNHG1-223ENST00000545440 PTGES3LE9PB15 166 aa6.11□□□□□ -1.43
SNHG1-223ENST00000545440 H0YHG0 523 aa6.11□□□□□ -1.43
SNHG1-223ENST00000545440 SDCBPO00560 298 aaPredicted RBP6.11□□□□□ -1.43
SNHG1-223ENST00000545440 HSD17B6O14756 317 aa6.11□□□□□ -1.43
SNHG1-223ENST00000545440 CRTAPO75718 401 aaPredicted RBP6.11□□□□□ -1.43
SNHG1-223ENST00000545440 MT-ND4P03905 459 aa6.11□□□□□ -1.43
SNHG1-223ENST00000545440 OPN1MWP04001 364 aa6.11□□□□□ -1.43
SNHG1-223ENST00000545440 GLAP06280 429 aa6.11□□□□□ -1.43
SNHG1-223ENST00000545440 FAM106CPP0CH98 169 aa6.11□□□□□ -1.43
SNHG1-223ENST00000545440 OPN1MW2P0DN77 364 aa6.11□□□□□ -1.43
SNHG1-223ENST00000545440 OPN1MW3P0DN78 364 aa6.11□□□□□ -1.43
SNHG1-223ENST00000545440 CD24P25063 80 aa6.11□□□□□ -1.43
SNHG1-223ENST00000545440 PSMA1P25786 263 aaKnown RBP6.11□□□□□ -1.43
SNHG1-223ENST00000545440 GNG10P50151 68 aa6.11□□□□□ -1.43
SNHG1-223ENST00000545440 PTTG1IPP53801 180 aa6.11□□□□□ -1.43
SNHG1-223ENST00000545440 ZNF816Q0VGE8 651 aaPredicted RBP6.11□□□□□ -1.43
SNHG1-223ENST00000545440 INSL4Q14641 139 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms