RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 OR2S2Q9NQN1 319 aa11.08□□□□□ -0.64
SP140-213ENST00000543928 GNG12Q9UBI6 72 aa11.08□□□□□ -0.64
SP140-213ENST00000543928 EXTL2Q9UBQ6 330 aa11.08□□□□□ -0.64
SP140-213ENST00000543928 ADAM30Q9UKF2 790 aa11.08□□□□□ -0.64
SP140-213ENST00000543928 PSG11Q9UQ72 335 aa11.08□□□□□ -0.64
SP140-213ENST00000543928 JMJD1CQ15652 2540 aa11.07□□□□□ -0.64
SP140-213ENST00000543928 IGKV1D-8A0A087WSZ0 117 aa11.07□□□□□ -0.64
SP140-213ENST00000543928 MDFIC2A0A1B0GVS7 189 aa11.07□□□□□ -0.64
SP140-213ENST00000543928 FABP7O15540 132 aa11.07□□□□□ -0.64
SP140-213ENST00000543928 HLA-DQB1P01920 261 aa11.07□□□□□ -0.64
SP140-213ENST00000543928 KIR2DS4P43632 304 aa11.07□□□□□ -0.64
SP140-213ENST00000543928 GNG10P50151 68 aa11.07□□□□□ -0.64
SP140-213ENST00000543928 HTD2P86397 168 aa11.07□□□□□ -0.64
SP140-213ENST00000543928 GNMTQ14749 295 aa11.07□□□□□ -0.64
SP140-213ENST00000543928 KIR2DS1Q14954 304 aa11.07□□□□□ -0.64
SP140-213ENST00000543928 DEFB112Q30KQ8 113 aa11.07□□□□□ -0.64
SP140-213ENST00000543928 CNIH2Q6PI25 160 aa11.07□□□□□ -0.64
SP140-213ENST00000543928 LHFPL4Q7Z7J7 247 aa11.07□□□□□ -0.64
SP140-213ENST00000543928 OR4P4Q8NGL7 312 aa11.07□□□□□ -0.64
SP140-213ENST00000543928 ZNF596Q8TC21 504 aa11.07□□□□□ -0.64
SP140-213ENST00000543928 C17orf50Q8WW18 174 aa11.07□□□□□ -0.64
SP140-213ENST00000543928 GCDHQ92947 438 aaPredicted RBP11.07□□□□□ -0.64
SP140-213ENST00000543928 ZNF48Q96MX3 618 aaPredicted RBP11.07□□□□□ -0.64
SP140-213ENST00000543928 ZNRD1Q9P1U0 126 aa11.07□□□□□ -0.64
SP140-213ENST00000543928 JPT1Q9UK76 154 aa11.07□□□□□ -0.64
SP140-213ENST00000543928 FAM96BQ9Y3D0 163 aa11.07□□□□□ -0.64
SP140-213ENST00000543928 A0A1W2PPE3 182 aa11.06□□□□□ -0.64
SP140-213ENST00000543928 MEIS3P1A6NDR6 274 aa11.06□□□□□ -0.64
SP140-213ENST00000543928 J3QR06 171 aa11.06□□□□□ -0.64
SP140-213ENST00000543928 IGLV1-47P01700 117 aa11.06□□□□□ -0.64
SP140-213ENST00000543928 GSTT2P0CG29 244 aa11.06□□□□□ -0.64
SP140-213ENST00000543928 GSTT2BP0CG30 244 aa11.06□□□□□ -0.64
SP140-213ENST00000543928 PRSS3P35030 304 aa11.06□□□□□ -0.64
SP140-213ENST00000543928 PRRX1P54821 245 aa11.06□□□□□ -0.64
SP140-213ENST00000543928 SRSF7Q16629 238 aaKnown RBP eCLIP11.06□□□□□ -0.64
SP140-213ENST00000543928 TUSC1Q2TAM9 212 aa11.06□□□□□ -0.64
SP140-213ENST00000543928 HLA-DRB5Q30154 266 aa11.06□□□□□ -0.64
SP140-213ENST00000543928 STEAP3Q658P3 488 aa11.06□□□□□ -0.64
SP140-213ENST00000543928 Q6ZS49 121 aa11.06□□□□□ -0.64
SP140-213ENST00000543928 SNX29P2Q8IUI4 249 aa11.06□□□□□ -0.64
SP140-213ENST00000543928 SIGLECL1Q8N7X8 197 aa11.06□□□□□ -0.64
SP140-213ENST00000543928 BEND2Q8NDZ0 799 aa11.06□□□□□ -0.64
SP140-213ENST00000543928 OR4A4PQ8NGN8 299 aa11.06□□□□□ -0.64
SP140-213ENST00000543928 DIRAS2Q96HU8 199 aa11.06□□□□□ -0.64
SP140-213ENST00000543928 AJUBAQ96IF1 538 aa11.06□□□□□ -0.64
SP140-213ENST00000543928 MMP28Q9H239 520 aa11.06□□□□□ -0.64
SP140-213ENST00000543928 MMP27Q9H306 513 aa11.06□□□□□ -0.64
SP140-213ENST00000543928 TBL2Q9Y4P3 447 aaKnown RBP11.06□□□□□ -0.64
SP140-213ENST00000543928 A3GALT2U3KPV4 340 aa11.06□□□□□ -0.64
SP140-213ENST00000543928 NF1P21359 2839 aa11.05□□□□□ -0.64
SP140-213ENST00000543928 IGKV1-6A0A0C4DH72 117 aa11.05□□□□□ -0.64
SP140-213ENST00000543928 FBP1P09467 338 aa11.05□□□□□ -0.64
SP140-213ENST00000543928 HTR1DP28221 377 aa11.05□□□□□ -0.64
SP140-213ENST00000543928 PPP1CCP36873 323 aaKnown RBP11.05□□□□□ -0.64
SP140-213ENST00000543928 CBX5P45973 191 aa11.05□□□□□ -0.64
SP140-213ENST00000543928 HERPUD1Q15011 391 aa11.05□□□□□ -0.64
SP140-213ENST00000543928 Q3ZCU0 254 aa11.05□□□□□ -0.64
SP140-213ENST00000543928 MORN2Q502X0 79 aa11.05□□□□□ -0.64
SP140-213ENST00000543928 IGSF11Q5DX21 431 aa11.05□□□□□ -0.64
SP140-213ENST00000543928 LDLRAD2Q5SZI1 272 aa11.05□□□□□ -0.64
SP140-213ENST00000543928 MINOS1Q5TGZ0 78 aa11.05□□□□□ -0.64
SP140-213ENST00000543928 RBMS3Q6XE24 437 aaKnown RBP11.05□□□□□ -0.64
SP140-213ENST00000543928 GVQW1Q8N7I0 195 aa11.05□□□□□ -0.64
SP140-213ENST00000543928 ZNF439Q8NDP4 499 aa11.05□□□□□ -0.64
SP140-213ENST00000543928 ZNF418Q8TF45 676 aaPredicted RBP11.05□□□□□ -0.64
SP140-213ENST00000543928 OCSTAMPQ9BR26 566 aa11.05□□□□□ -0.64
SP140-213ENST00000543928 OR1A1Q9P1Q5 309 aa11.05□□□□□ -0.64
SP140-213ENST00000543928 SLC23A1Q9UHI7 598 aa11.05□□□□□ -0.64
SP140-213ENST00000543928 MINOS1-NBL1R4GNA1 71 aa11.05□□□□□ -0.64
SP140-213ENST00000543928 BUB1B-PAK6H3BSN5 160 aa11.04□□□□□ -0.64
SP140-213ENST00000543928 BET1O15155 118 aa11.04□□□□□ -0.64
SP140-213ENST00000543928 SLC31A2O15432 143 aa11.04□□□□□ -0.64
SP140-213ENST00000543928 HSPA12AO43301 675 aa11.04□□□□□ -0.64
SP140-213ENST00000543928 YPEL1O60688 119 aa11.04□□□□□ -0.64
SP140-213ENST00000543928 RGS11O94810 467 aa11.04□□□□□ -0.64
SP140-213ENST00000543928 TPPPO94811 219 aa11.04□□□□□ -0.64
SP140-213ENST00000543928 FCER2P06734 321 aa11.04□□□□□ -0.64
SP140-213ENST00000543928 ZBTB25P24278 435 aa11.04□□□□□ -0.64
SP140-213ENST00000543928 PAX6P26367 422 aa11.04□□□□□ -0.64
SP140-213ENST00000543928 TNFSF8P32971 234 aa11.04□□□□□ -0.64
SP140-213ENST00000543928 ZNF134P52741 427 aa11.04□□□□□ -0.64
SP140-213ENST00000543928 HOGA1Q86XE5 327 aa11.04□□□□□ -0.64
SP140-213ENST00000543928 DYNAPQ8N1N2 210 aa11.04□□□□□ -0.64
SP140-213ENST00000543928 LINC00311Q8N616 119 aa11.04□□□□□ -0.64
SP140-213ENST00000543928 C8orf31Q8N9H6 132 aa11.04□□□□□ -0.64
SP140-213ENST00000543928 BEST4Q8NFU0 473 aa11.04□□□□□ -0.64
SP140-213ENST00000543928 OR10X1Q8NGY0 326 aa11.04□□□□□ -0.64
SP140-213ENST00000543928 YPEL2Q96QA6 119 aa11.04□□□□□ -0.64
SP140-213ENST00000543928 ABHD1Q96SE0 405 aa11.04□□□□□ -0.64
SP140-213ENST00000543928 CABLES2Q9BTV7 478 aa11.04□□□□□ -0.64
SP140-213ENST00000543928 PRDM13Q9H4Q3 707 aa11.04□□□□□ -0.64
SP140-213ENST00000543928 IFT46Q9NQC8 304 aa11.04□□□□□ -0.64
SP140-213ENST00000543928 BATF3Q9NR55 127 aa11.04□□□□□ -0.64
SP140-213ENST00000543928 DPM3Q9P2X0 92 aa11.04□□□□□ -0.64
SP140-213ENST00000543928 AMMECR1Q9Y4X0 333 aaPredicted RBP11.04□□□□□ -0.64
SP140-213ENST00000543928 CUBNO60494 3623 aa11.03□□□□□ -0.64
SP140-213ENST00000543928 LEUTXA8MZ59 168 aa11.03□□□□□ -0.64
SP140-213ENST00000543928 IFNA2P01563 188 aa11.03□□□□□ -0.64
SP140-213ENST00000543928 LPLP06858 475 aa11.03□□□□□ -0.64
SP140-213ENST00000543928 S100A5P33763 92 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms