RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 PLA1AQ53H76 456 aa12.2□□□□□ -0.46
CD9-210ENST00000543916 HACD4Q5VWC8 232 aa12.2□□□□□ -0.46
CD9-210ENST00000543916 DTX3Q8N9I9 347 aa12.2□□□□□ -0.46
CD9-210ENST00000543916 ZNF439Q8NDP4 499 aa12.2□□□□□ -0.46
CD9-210ENST00000543916 DYNC2LI1Q8TCX1 351 aa12.2□□□□□ -0.46
CD9-210ENST00000543916 NUDCD2Q8WVJ2 157 aa12.2□□□□□ -0.46
CD9-210ENST00000543916 SSMEM1Q8WWF3 244 aa12.2□□□□□ -0.46
CD9-210ENST00000543916 ACOT12Q8WYK0 555 aa12.2□□□□□ -0.46
CD9-210ENST00000543916 MAFIPQ8WZ33 124 aa12.2□□□□□ -0.46
CD9-210ENST00000543916 PHF21AQ96BD5 680 aa12.2□□□□□ -0.46
CD9-210ENST00000543916 MALSU1Q96EH3 234 aa12.2□□□□□ -0.46
CD9-210ENST00000543916 RBM38Q9H0Z9 239 aaKnown RBP12.2□□□□□ -0.46
CD9-210ENST00000543916 DPM3Q9P2X0 92 aa12.2□□□□□ -0.46
CD9-210ENST00000543916 GNG12Q9UBI6 72 aa12.2□□□□□ -0.46
CD9-210ENST00000543916 ZNF230Q9UIE0 474 aaPredicted RBP12.2□□□□□ -0.46
CD9-210ENST00000543916 LY6LH3BQJ8 138 aa12.19□□□□□ -0.46
CD9-210ENST00000543916 CLDN34H7C241 214 aa12.19□□□□□ -0.46
CD9-210ENST00000543916 TRIM77I1YAP6 450 aa12.19□□□□□ -0.46
CD9-210ENST00000543916 SLC31A2O15432 143 aa12.19□□□□□ -0.46
CD9-210ENST00000543916 SSX5O60225 188 aa12.19□□□□□ -0.46
CD9-210ENST00000543916 HPGDSO60760 199 aa12.19□□□□□ -0.46
CD9-210ENST00000543916 RNASE1P07998 156 aaKnown RBP12.19□□□□□ -0.46
CD9-210ENST00000543916 SCTP09683 121 aa12.19□□□□□ -0.46
CD9-210ENST00000543916 ZNF182P17025 639 aaPredicted RBP12.19□□□□□ -0.46
CD9-210ENST00000543916 PPP1CCP36873 323 aaKnown RBP12.19□□□□□ -0.46
CD9-210ENST00000543916 MORN2Q502X0 79 aa12.19□□□□□ -0.46
CD9-210ENST00000543916 IL1F10Q8WWZ1 152 aa12.19□□□□□ -0.46
CD9-210ENST00000543916 GALMQ96C23 342 aa12.19□□□□□ -0.46
CD9-210ENST00000543916 SSX3Q99909 188 aa12.19□□□□□ -0.46
CD9-210ENST00000543916 CHIAQ9BZP6 476 aa12.19□□□□□ -0.46
CD9-210ENST00000543916 OR2S2Q9NQN1 319 aa12.19□□□□□ -0.46
CD9-210ENST00000543916 DIABLOQ9NR28 239 aa12.19□□□□□ -0.46
CD9-210ENST00000543916 JPT1Q9UK76 154 aa12.19□□□□□ -0.46
CD9-210ENST00000543916 MGAT4AQ9UM21 535 aa12.19□□□□□ -0.46
CD9-210ENST00000543916 POMT1Q9Y6A1 747 aa12.19□□□□□ -0.46
CD9-210ENST00000543916 IGKV1-6A0A0C4DH72 117 aa12.18□□□□□ -0.46
CD9-210ENST00000543916 LEUTXA8MZ59 168 aa12.18□□□□□ -0.46
CD9-210ENST00000543916 TRDCB7Z8K6 153 aa12.18□□□□□ -0.46
CD9-210ENST00000543916 H3BUX3 64 aa12.18□□□□□ -0.46
CD9-210ENST00000543916 XRCC3O43542 346 aa12.18□□□□□ -0.46
CD9-210ENST00000543916 PTHLHP12272 177 aa12.18□□□□□ -0.46
CD9-210ENST00000543916 TALDO1P37837 337 aa12.18□□□□□ -0.46
CD9-210ENST00000543916 ZNF134P52741 427 aa12.18□□□□□ -0.46
CD9-210ENST00000543916 PNLIPRP3Q17RR3 467 aa12.18□□□□□ -0.46
CD9-210ENST00000543916 LRRC75BQ2VPJ9 315 aa12.18□□□□□ -0.46
CD9-210ENST00000543916 Q3ZCU0 254 aa12.18□□□□□ -0.46
CD9-210ENST00000543916 CT45A1Q5HYN5 189 aa12.18□□□□□ -0.46
CD9-210ENST00000543916 TPTE2P1Q5T6R2 138 aa12.18□□□□□ -0.46
CD9-210ENST00000543916 SLC25A48Q6ZT89 311 aaKnown RBP12.18□□□□□ -0.46
CD9-210ENST00000543916 LINC00311Q8N616 119 aa12.18□□□□□ -0.46
CD9-210ENST00000543916 TMEM86BQ8N661 226 aa12.18□□□□□ -0.46
CD9-210ENST00000543916 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.18□□□□□ -0.46
CD9-210ENST00000543916 C8orf31Q8N9H6 132 aa12.18□□□□□ -0.46
CD9-210ENST00000543916 CT45A3Q8NHU0 189 aa12.18□□□□□ -0.46
CD9-210ENST00000543916 PIFOQ8TCI5 191 aa12.18□□□□□ -0.46
CD9-210ENST00000543916 ZFAND2BQ8WV99 257 aa12.18□□□□□ -0.46
CD9-210ENST00000543916 AP3S1Q92572 193 aa12.18□□□□□ -0.46
CD9-210ENST00000543916 S100A16Q96FQ6 103 aaKnown RBP12.18□□□□□ -0.46
CD9-210ENST00000543916 DPAGT1Q9H3H5 408 aa12.18□□□□□ -0.46
CD9-210ENST00000543916 AUNIPQ9H7T9 357 aa12.18□□□□□ -0.46
CD9-210ENST00000543916 OR1A1Q9P1Q5 309 aa12.18□□□□□ -0.46
CD9-210ENST00000543916 AMMECR1Q9Y4X0 333 aaPredicted RBP12.18□□□□□ -0.46
CD9-210ENST00000543916 IGKV1D-8A0A087WSZ0 117 aa12.17□□□□□ -0.46
CD9-210ENST00000543916 CCDC160A6NGH7 325 aa12.17□□□□□ -0.46
CD9-210ENST00000543916 VGLL3A8MV65 326 aa12.17□□□□□ -0.46
CD9-210ENST00000543916 YPEL1O60688 119 aa12.17□□□□□ -0.46
CD9-210ENST00000543916 APOA1P02647 267 aa12.17□□□□□ -0.46
CD9-210ENST00000543916 ELK1P19419 428 aa12.17□□□□□ -0.46
CD9-210ENST00000543916 DTYMKP23919 212 aa12.17□□□□□ -0.46
CD9-210ENST00000543916 SOX6P35712 828 aa12.17□□□□□ -0.46
CD9-210ENST00000543916 CEACAM3P40198 252 aa12.17□□□□□ -0.46
CD9-210ENST00000543916 RAB13P51153 203 aa12.17□□□□□ -0.46
CD9-210ENST00000543916 TAS2R20P59543 309 aa12.17□□□□□ -0.46
CD9-210ENST00000543916 GNG2P59768 71 aa12.17□□□□□ -0.46
CD9-210ENST00000543916 DIAPH2-AS1Q14236 149 aa12.17□□□□□ -0.46
CD9-210ENST00000543916 HERPUD1Q15011 391 aa12.17□□□□□ -0.46
CD9-210ENST00000543916 AANATQ16613 207 aa12.17□□□□□ -0.46
CD9-210ENST00000543916 MZT2AQ6P582 158 aa12.17□□□□□ -0.46
CD9-210ENST00000543916 OR10X1Q8NGY0 326 aa12.17□□□□□ -0.46
CD9-210ENST00000543916 FAM216AQ8WUB2 273 aa12.17□□□□□ -0.46
CD9-210ENST00000543916 CMTM3Q96MX0 182 aa12.17□□□□□ -0.46
CD9-210ENST00000543916 YPEL2Q96QA6 119 aa12.17□□□□□ -0.46
CD9-210ENST00000543916 MDFIQ99750 246 aa12.17□□□□□ -0.46
CD9-210ENST00000543916 OCSTAMPQ9BR26 566 aa12.17□□□□□ -0.46
CD9-210ENST00000543916 PARP12Q9H0J9 701 aaKnown RBP12.17□□□□□ -0.46
CD9-210ENST00000543916 CCDC59Q9P031 241 aaKnown RBP12.17□□□□□ -0.46
CD9-210ENST00000543916 SLC23A1Q9UHI7 598 aa12.17□□□□□ -0.46
CD9-210ENST00000543916 RNF212BA8MTL3 300 aa12.16□□□□□ -0.46
CD9-210ENST00000543916 FABP7O15540 132 aa12.16□□□□□ -0.46
CD9-210ENST00000543916 GSTT2P0CG29 244 aa12.16□□□□□ -0.46
CD9-210ENST00000543916 GSTT2BP0CG30 244 aa12.16□□□□□ -0.46
CD9-210ENST00000543916 KIR2DS4P43632 304 aa12.16□□□□□ -0.46
CD9-210ENST00000543916 PITPNAQ00169 270 aa12.16□□□□□ -0.46
CD9-210ENST00000543916 MADCAM1Q13477 382 aa12.16□□□□□ -0.46
CD9-210ENST00000543916 KIR2DS1Q14954 304 aa12.16□□□□□ -0.46
CD9-210ENST00000543916 SRSF7Q16629 238 aaKnown RBP eCLIP12.16□□□□□ -0.46
CD9-210ENST00000543916 IGSF11Q5DX21 431 aa12.16□□□□□ -0.46
CD9-210ENST00000543916 STEAP3Q658P3 488 aa12.16□□□□□ -0.46
CD9-210ENST00000543916 Q6ZS49 121 aa12.16□□□□□ -0.46
CD9-210ENST00000543916 OR4A4PQ8NGN8 299 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms