RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 TRAPPC2LQ9UL33 140 aa9.32□□□□□ -0.92
GABPB1-206ENST00000543881 PEX16Q9Y5Y5 336 aa9.32□□□□□ -0.92
GABPB1-206ENST00000543881 NCBP2LA6PVI3 153 aaKnown RBP9.31□□□□□ -0.92
GABPB1-206ENST00000543881 RAMP3O60896 148 aa9.31□□□□□ -0.92
GABPB1-206ENST00000543881 SC5DO75845 299 aa9.31□□□□□ -0.92
GABPB1-206ENST00000543881 CD1AP06126 327 aa9.31□□□□□ -0.92
GABPB1-206ENST00000543881 MGMTP16455 207 aa9.31□□□□□ -0.92
GABPB1-206ENST00000543881 CD1BP29016 333 aa9.31□□□□□ -0.92
GABPB1-206ENST00000543881 GPR12P47775 334 aa9.31□□□□□ -0.92
GABPB1-206ENST00000543881 ZNF137PP52743 207 aa9.31□□□□□ -0.92
GABPB1-206ENST00000543881 WNT4P56705 351 aa9.31□□□□□ -0.92
GABPB1-206ENST00000543881 TAS2R43P59537 309 aa9.31□□□□□ -0.92
GABPB1-206ENST00000543881 Q3ZCU0 254 aa9.31□□□□□ -0.92
GABPB1-206ENST00000543881 OGFRL1Q5TC84 451 aaPredicted RBP9.31□□□□□ -0.92
GABPB1-206ENST00000543881 CDH26Q8IXH8 852 aa9.31□□□□□ -0.92
GABPB1-206ENST00000543881 C8orf59Q8N0T1 100 aaPredicted RBP9.31□□□□□ -0.92
GABPB1-206ENST00000543881 PRR18Q8N4B5 295 aa9.31□□□□□ -0.92
GABPB1-206ENST00000543881 NANOGP1Q8N7R0 232 aa9.31□□□□□ -0.92
GABPB1-206ENST00000543881 BPIFB6Q8NFQ5 453 aa9.31□□□□□ -0.92
GABPB1-206ENST00000543881 OR2T10Q8NGZ9 312 aa9.31□□□□□ -0.92
GABPB1-206ENST00000543881 Q96M66 194 aa9.31□□□□□ -0.92
GABPB1-206ENST00000543881 DUX3Q96PT4 197 aa9.31□□□□□ -0.92
GABPB1-206ENST00000543881 GAR1Q9NY12 217 aaKnown RBP9.31□□□□□ -0.92
GABPB1-206ENST00000543881 DYNC2H1Q8NCM8 4307 aaKnown RBP9.31□□□□□ -0.92
GABPB1-206ENST00000543881 UBE2QL1A1L167 161 aa9.3□□□□□ -0.92
GABPB1-206ENST00000543881 MYL12BO14950 172 aa9.3□□□□□ -0.92
GABPB1-206ENST00000543881 SPINT2O43291 252 aa9.3□□□□□ -0.92
GABPB1-206ENST00000543881 CRTAPO75718 401 aaPredicted RBP9.3□□□□□ -0.92
GABPB1-206ENST00000543881 MOSP00540 346 aa9.3□□□□□ -0.92
GABPB1-206ENST00000543881 FUT3P21217 361 aa9.3□□□□□ -0.92
GABPB1-206ENST00000543881 IL3RAP26951 378 aa9.3□□□□□ -0.92
GABPB1-206ENST00000543881 MYCNOSP40205 109 aa9.3□□□□□ -0.92
GABPB1-206ENST00000543881 F2RL1P55085 397 aa9.3□□□□□ -0.92
GABPB1-206ENST00000543881 GNMTQ14749 295 aa9.3□□□□□ -0.92
GABPB1-206ENST00000543881 FAM27D1Q5T7N8 215 aa9.3□□□□□ -0.92
GABPB1-206ENST00000543881 LCNL1Q6ZST4 164 aa9.3□□□□□ -0.92
GABPB1-206ENST00000543881 FOXRED2Q8IWF2 684 aa9.3□□□□□ -0.92
GABPB1-206ENST00000543881 KLHL30-AS1Q8NEE0 82 aa9.3□□□□□ -0.92
GABPB1-206ENST00000543881 FAM46BQ96A09 425 aa9.3□□□□□ -0.92
GABPB1-206ENST00000543881 S1PR3Q99500 378 aa9.3□□□□□ -0.92
GABPB1-206ENST00000543881 P2RX4Q99571 388 aa9.3□□□□□ -0.92
GABPB1-206ENST00000543881 HSPB9Q9BQS6 159 aa9.3□□□□□ -0.92
GABPB1-206ENST00000543881 ZFP57Q9NU63 452 aa9.3□□□□□ -0.92
GABPB1-206ENST00000543881 MBNL3Q9NUK0 354 aaKnown RBP9.3□□□□□ -0.92
GABPB1-206ENST00000543881 LIN7CQ9NUP9 197 aaKnown RBP9.3□□□□□ -0.92
GABPB1-206ENST00000543881 GNG12Q9UBI6 72 aa9.3□□□□□ -0.92
GABPB1-206ENST00000543881 STAB2Q8WWQ8 2551 aa9.3□□□□□ -0.92
GABPB1-206ENST00000543881 FAM90A10PA6NDY2 464 aa9.29□□□□□ -0.92
GABPB1-206ENST00000543881 FAM90A7PA6NKC0 464 aa9.29□□□□□ -0.92
GABPB1-206ENST00000543881 NUDT19A8MXV4 375 aa9.29□□□□□ -0.92
GABPB1-206ENST00000543881 FAM90A23PA8MXZ1 464 aa9.29□□□□□ -0.92
GABPB1-206ENST00000543881 AP4M1O00189 453 aa9.29□□□□□ -0.92
GABPB1-206ENST00000543881 CASQ2O14958 399 aaPredicted RBP9.29□□□□□ -0.92
GABPB1-206ENST00000543881 RPLP1P05386 114 aaKnown RBP9.29□□□□□ -0.92
GABPB1-206ENST00000543881 SLC35B1P78383 322 aa9.29□□□□□ -0.92
GABPB1-206ENST00000543881 C6orf183Q5T699 404 aa9.29□□□□□ -0.92
GABPB1-206ENST00000543881 FAM71E2Q8N5Q1 922 aa9.29□□□□□ -0.92
GABPB1-206ENST00000543881 OR52L2PQ8NGH6 319 aa9.29□□□□□ -0.92
GABPB1-206ENST00000543881 MRPL30Q8TCC3 161 aaKnown RBP9.29□□□□□ -0.92
GABPB1-206ENST00000543881 PRR25Q96S07 402 aa9.29□□□□□ -0.92
GABPB1-206ENST00000543881 TAF9BQ9HBM6 251 aa9.29□□□□□ -0.92
GABPB1-206ENST00000543881 PDCD6O75340 191 aa9.28□□□□□ -0.92
GABPB1-206ENST00000543881 CA11O75493 328 aa9.28□□□□□ -0.92
GABPB1-206ENST00000543881 GLAP06280 429 aa9.28□□□□□ -0.92
GABPB1-206ENST00000543881 SLC6A1P30531 599 aa9.28□□□□□ -0.92
GABPB1-206ENST00000543881 CFHR3Q02985 330 aa9.28□□□□□ -0.92
GABPB1-206ENST00000543881 TMEM30BQ3MIR4 351 aa9.28□□□□□ -0.92
GABPB1-206ENST00000543881 MORN2Q502X0 79 aa9.28□□□□□ -0.92
GABPB1-206ENST00000543881 C6orf141Q5SZD1 244 aa9.28□□□□□ -0.92
GABPB1-206ENST00000543881 OR10K2Q6IF99 312 aa9.28□□□□□ -0.92
GABPB1-206ENST00000543881 TEX38Q6PEX7 206 aa9.28□□□□□ -0.92
GABPB1-206ENST00000543881 LRRTM1Q86UE6 522 aa9.28□□□□□ -0.92
GABPB1-206ENST00000543881 ZNF695Q8IW36 515 aa9.28□□□□□ -0.92
GABPB1-206ENST00000543881 ODF3L1Q8IXM7 274 aa9.28□□□□□ -0.92
GABPB1-206ENST00000543881 COMMD1Q8N668 190 aa9.28□□□□□ -0.92
GABPB1-206ENST00000543881 NKAIN3Q8N8D7 197 aa9.28□□□□□ -0.92
GABPB1-206ENST00000543881 RAX2Q96IS3 184 aa9.28□□□□□ -0.92
GABPB1-206ENST00000543881 UQCC2Q9BRT2 126 aa9.28□□□□□ -0.92
GABPB1-206ENST00000543881 OR2S2Q9NQN1 319 aa9.28□□□□□ -0.92
GABPB1-206ENST00000543881 LCE6AA0A183 80 aa9.28□□□□□ -0.92
GABPB1-206ENST00000543881 ANKRD65E5RJM6 399 aa9.28□□□□□ -0.92
GABPB1-206ENST00000543881 TXNL1O43396 289 aa9.28□□□□□ -0.92
GABPB1-206ENST00000543881 LANCL1O43813 399 aa9.28□□□□□ -0.92
GABPB1-206ENST00000543881 CDK1P06493 297 aa9.28□□□□□ -0.92
GABPB1-206ENST00000543881 LUMP51884 338 aaPredicted RBP9.28□□□□□ -0.92
GABPB1-206ENST00000543881 LSAMPQ13449 338 aa9.28□□□□□ -0.92
GABPB1-206ENST00000543881 GPR50Q13585 617 aa9.28□□□□□ -0.92
GABPB1-206ENST00000543881 PNLIPRP3Q17RR3 467 aa9.28□□□□□ -0.92
GABPB1-206ENST00000543881 ACSM3Q53FZ2 586 aa9.28□□□□□ -0.92
GABPB1-206ENST00000543881 STEAP3Q658P3 488 aa9.28□□□□□ -0.92
GABPB1-206ENST00000543881 TRAT1Q6PIZ9 186 aa9.28□□□□□ -0.92
GABPB1-206ENST00000543881 RITA1Q96K30 269 aa9.28□□□□□ -0.92
GABPB1-206ENST00000543881 RASL11BQ9BPW5 248 aa9.28□□□□□ -0.92
GABPB1-206ENST00000543881 SULT4A1Q9BR01 284 aa9.28□□□□□ -0.92
GABPB1-206ENST00000543881 KCNK15Q9H427 330 aa9.28□□□□□ -0.92
GABPB1-206ENST00000543881 DCLRE1BQ9H816 532 aa9.28□□□□□ -0.92
GABPB1-206ENST00000543881 RAB9BQ9NP90 201 aa9.28□□□□□ -0.92
GABPB1-206ENST00000543881 GHRLQ9UBU3 117 aa9.28□□□□□ -0.92
GABPB1-206ENST00000543881 ERGIC3Q9Y282 383 aa9.28□□□□□ -0.92
GABPB1-206ENST00000543881 LSM2Q9Y333 95 aaKnown RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms