RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 SIRT7Q9NRC8 400 aa9.77□□□□□ -0.85
DDB1-223ENST00000543658 MCUBQ9NWR8 336 aa9.77□□□□□ -0.85
DDB1-223ENST00000543658 GFOD1Q9NXC2 390 aa9.77□□□□□ -0.85
DDB1-223ENST00000543658 AUP1Q9Y679 476 aa9.77□□□□□ -0.85
DDB1-223ENST00000543658 IGKV1D-8A0A087WSZ0 117 aa9.76□□□□□ -0.85
DDB1-223ENST00000543658 LINC00854A0A1B0GVQ3 168 aa9.76□□□□□ -0.85
DDB1-223ENST00000543658 FAM172BPA6NC97 362 aa9.76□□□□□ -0.85
DDB1-223ENST00000543658 M0QYG6 137 aa9.76□□□□□ -0.85
DDB1-223ENST00000543658 TOR1AO14656 332 aa9.76□□□□□ -0.85
DDB1-223ENST00000543658 LANCL1O43813 399 aa9.76□□□□□ -0.85
DDB1-223ENST00000543658 UPK1BO75841 260 aa9.76□□□□□ -0.85
DDB1-223ENST00000543658 AMY2AP04746 511 aa9.76□□□□□ -0.85
DDB1-223ENST00000543658 OR5H8P0DN80 308 aa9.76□□□□□ -0.85
DDB1-223ENST00000543658 CGB3P0DN86 165 aa9.76□□□□□ -0.85
DDB1-223ENST00000543658 CGB7P0DN87 165 aa9.76□□□□□ -0.85
DDB1-223ENST00000543658 GNG10P50151 68 aa9.76□□□□□ -0.85
DDB1-223ENST00000543658 DLX6P56179 175 aa9.76□□□□□ -0.85
DDB1-223ENST00000543658 DEFA1P59665 94 aa9.76□□□□□ -0.85
DDB1-223ENST00000543658 DEFA3P59666 94 aa9.76□□□□□ -0.85
DDB1-223ENST00000543658 HERV-K104P61576 105 aa9.76□□□□□ -0.85
DDB1-223ENST00000543658 PAX2Q02962 417 aa9.76□□□□□ -0.85
DDB1-223ENST00000543658 SPNS3Q6ZMD2 512 aa9.76□□□□□ -0.85
DDB1-223ENST00000543658 OR52L2PQ8NGH6 319 aa9.76□□□□□ -0.85
DDB1-223ENST00000543658 SDHCQ99643 169 aaPredicted RBP9.76□□□□□ -0.85
DDB1-223ENST00000543658 C7orf50Q9BRJ6 194 aaKnown RBP9.76□□□□□ -0.85
DDB1-223ENST00000543658 TMEM133Q9H2Q1 129 aa9.76□□□□□ -0.85
DDB1-223ENST00000543658 MED13LQ71F56 2210 aa9.75□□□□□ -0.85
DDB1-223ENST00000543658 TRBV6-7A0A0A0MS04 114 aa9.75□□□□□ -0.85
DDB1-223ENST00000543658 NAP1L6A6NFF2 107 aa9.75□□□□□ -0.85
DDB1-223ENST00000543658 YPEL1O60688 119 aa9.75□□□□□ -0.85
DDB1-223ENST00000543658 CD99P14209 185 aa9.75□□□□□ -0.85
DDB1-223ENST00000543658 PRTN3P24158 256 aa9.75□□□□□ -0.85
DDB1-223ENST00000543658 COX7A1P24310 79 aa9.75□□□□□ -0.85
DDB1-223ENST00000543658 PPP1CCP36873 323 aaKnown RBP9.75□□□□□ -0.85
DDB1-223ENST00000543658 CEACAM6P40199 344 aa9.75□□□□□ -0.85
DDB1-223ENST00000543658 RFX2P48378 723 aa9.75□□□□□ -0.85
DDB1-223ENST00000543658 RAB7AP51149 207 aa9.75□□□□□ -0.85
DDB1-223ENST00000543658 PRRX1P54821 245 aa9.75□□□□□ -0.85
DDB1-223ENST00000543658 PAX8Q06710 450 aa9.75□□□□□ -0.85
DDB1-223ENST00000543658 DYRK1AQ13627 763 aa9.75□□□□□ -0.85
DDB1-223ENST00000543658 SCGB2B2Q4G0G5 96 aa9.75□□□□□ -0.85
DDB1-223ENST00000543658 VAX1Q5SQQ9 334 aa9.75□□□□□ -0.85
DDB1-223ENST00000543658 ARRDC1Q8N5I2 433 aa9.75□□□□□ -0.85
DDB1-223ENST00000543658 TEX29Q8N6K0 151 aa9.75□□□□□ -0.85
DDB1-223ENST00000543658 OR2AK2Q8NG84 335 aa9.75□□□□□ -0.85
DDB1-223ENST00000543658 OR4C16Q8NGL9 310 aa9.75□□□□□ -0.85
DDB1-223ENST00000543658 OR6F1Q8NGZ6 308 aa9.75□□□□□ -0.85
DDB1-223ENST00000543658 DACT3Q96B18 629 aaPredicted RBP9.75□□□□□ -0.85
DDB1-223ENST00000543658 YPEL2Q96QA6 119 aa9.75□□□□□ -0.85
DDB1-223ENST00000543658 CLEC7AQ9BXN2 247 aa9.75□□□□□ -0.85
DDB1-223ENST00000543658 SIRPDQ9H106 197 aa9.75□□□□□ -0.85
DDB1-223ENST00000543658 LINC00574Q9H8X3 128 aa9.75□□□□□ -0.85
DDB1-223ENST00000543658 OR1A1Q9P1Q5 309 aa9.75□□□□□ -0.85
DDB1-223ENST00000543658 SCP2D1Q9UJQ7 156 aa9.75□□□□□ -0.85
DDB1-223ENST00000543658 MYO9AB2RTY4 2548 aa9.75□□□□□ -0.85
DDB1-223ENST00000543658 IGHV2-26A0A0B4J1V2 119 aa9.74□□□□□ -0.85
DDB1-223ENST00000543658 CD5LO43866 347 aa9.74□□□□□ -0.85
DDB1-223ENST00000543658 MMP23AO75900 390 aa9.74□□□□□ -0.85
DDB1-223ENST00000543658 CD74P04233 296 aa9.74□□□□□ -0.85
DDB1-223ENST00000543658 NFYAP23511 347 aaPredicted RBP9.74□□□□□ -0.85
DDB1-223ENST00000543658 IL3RAP26951 378 aa9.74□□□□□ -0.85
DDB1-223ENST00000543658 FCGR2CP31995 323 aa9.74□□□□□ -0.85
DDB1-223ENST00000543658 LGALS4P56470 323 aa9.74□□□□□ -0.85
DDB1-223ENST00000543658 KLF9Q13886 244 aaPredicted RBP9.74□□□□□ -0.85
DDB1-223ENST00000543658 GNMTQ14749 295 aa9.74□□□□□ -0.85
DDB1-223ENST00000543658 HERPUD1Q15011 391 aa9.74□□□□□ -0.85
DDB1-223ENST00000543658 Q3ZCU0 254 aa9.74□□□□□ -0.85
DDB1-223ENST00000543658 MORN2Q502X0 79 aa9.74□□□□□ -0.85
DDB1-223ENST00000543658 GPR157Q5UAW9 335 aa9.74□□□□□ -0.85
DDB1-223ENST00000543658 MZT2BQ6NZ67 158 aa9.74□□□□□ -0.85
DDB1-223ENST00000543658 OVCH2Q7RTZ1 564 aa9.74□□□□□ -0.85
DDB1-223ENST00000543658 C5orf24Q7Z6I8 188 aa9.74□□□□□ -0.85
DDB1-223ENST00000543658 LYSMD2Q8IV50 215 aa9.74□□□□□ -0.85
DDB1-223ENST00000543658 ABHD12Q8N2K0 398 aa9.74□□□□□ -0.85
DDB1-223ENST00000543658 PNKDQ8N490 385 aa9.74□□□□□ -0.85
DDB1-223ENST00000543658 Q8N7P7 452 aa9.74□□□□□ -0.85
DDB1-223ENST00000543658 OR9G1Q8NH87 305 aa9.74□□□□□ -0.85
DDB1-223ENST00000543658 ZNF596Q8TC21 504 aa9.74□□□□□ -0.85
DDB1-223ENST00000543658 LHX4Q969G2 390 aa9.74□□□□□ -0.85
DDB1-223ENST00000543658 PRRT1Q99946 306 aa9.74□□□□□ -0.85
DDB1-223ENST00000543658 ZNF2Q9BSG1 426 aaPredicted RBP9.74□□□□□ -0.85
DDB1-223ENST00000543658 ABHD14AQ9BUJ0 271 aa9.74□□□□□ -0.85
DDB1-223ENST00000543658 TINAGL1Q9GZM7 467 aaPredicted RBP9.74□□□□□ -0.85
DDB1-223ENST00000543658 RDH8Q9NYR8 311 aa9.74□□□□□ -0.85
DDB1-223ENST00000543658 AMMECR1Q9Y4X0 333 aaPredicted RBP9.74□□□□□ -0.85
DDB1-223ENST00000543658 ITPR3Q14573 2671 aa9.74□□□□□ -0.85
DDB1-223ENST00000543658 CREBBPQ92793 2442 aa9.74□□□□□ -0.85
DDB1-223ENST00000543658 ABCA1O95477 2261 aa9.73□□□□□ -0.85
DDB1-223ENST00000543658 TRAV40A0A0B4J280 105 aa9.73□□□□□ -0.85
DDB1-223ENST00000543658 IGKV1-6A0A0C4DH72 117 aa9.73□□□□□ -0.85
DDB1-223ENST00000543658 CYSRT1A8MQ03 144 aa9.73□□□□□ -0.85
DDB1-223ENST00000543658 LYRM1O43325 122 aa9.73□□□□□ -0.85
DDB1-223ENST00000543658 IGHV3-7P01780 117 aa9.73□□□□□ -0.85
DDB1-223ENST00000543658 ARG1P05089 322 aa9.73□□□□□ -0.85
DDB1-223ENST00000543658 MMP9P14780 707 aa9.73□□□□□ -0.85
DDB1-223ENST00000543658 HOXB4P17483 251 aaPredicted RBP9.73□□□□□ -0.85
DDB1-223ENST00000543658 HNF1AP20823 631 aa9.73□□□□□ -0.85
DDB1-223ENST00000543658 LUMP51884 338 aaPredicted RBP9.73□□□□□ -0.85
DDB1-223ENST00000543658 LOXL3P58215 753 aa9.73□□□□□ -0.85
DDB1-223ENST00000543658 FXYD4P59646 89 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms