RNA–Protein interactions for RNA: ENST00000543545.5

CPSF7-221, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-221	ENST00000543545	C1orf229	Q6ZS94	237 aa	Predicted RBP	8.3	□□□□□ -1.08
CPSF7-221	ENST00000543545	OR52M1	Q8NGK5	317 aa		8.3	□□□□□ -1.08
CPSF7-221	ENST00000543545	OR5H2	Q8NGV7	314 aa		8.3	□□□□□ -1.08
CPSF7-221	ENST00000543545	OR10J5	Q8NHC4	309 aa		8.3	□□□□□ -1.08
CPSF7-221	ENST00000543545	TNFRSF14	Q92956	283 aa		8.3	□□□□□ -1.08
CPSF7-221	ENST00000543545	SOST	Q9BQB4	213 aa		8.3	□□□□□ -1.08
CPSF7-221	ENST00000543545	CLEC7A	Q9BXN2	247 aa		8.3	□□□□□ -1.08
CPSF7-221	ENST00000543545	MS4A7	Q9GZW8	240 aa	Predicted RBP	8.3	□□□□□ -1.08
CPSF7-221	ENST00000543545	UNKL	Q9H9P5	680 aa	Known RBP	8.3	□□□□□ -1.08
CPSF7-221	ENST00000543545	KLK11	Q9UBX7	282 aa		8.3	□□□□□ -1.08
CPSF7-221	ENST00000543545	ANXA10	Q9UJ72	324 aa		8.3	□□□□□ -1.08
CPSF7-221	ENST00000543545	JPT1	Q9UK76	154 aa		8.3	□□□□□ -1.08
CPSF7-221	ENST00000543545		V9GYH0	126 aa		8.3	□□□□□ -1.08
CPSF7-221	ENST00000543545	ARHGAP32	A7KAX9	2087 aa		8.3	□□□□□ -1.08
CPSF7-221	ENST00000543545	INAFM1	C9JVW0	142 aa		8.29	□□□□□ -1.08
CPSF7-221	ENST00000543545		J3QRK9	145 aa		8.29	□□□□□ -1.08
CPSF7-221	ENST00000543545	CTDSPL	O15194	276 aa		8.29	□□□□□ -1.08
CPSF7-221	ENST00000543545	PMP2	P02689	132 aa		8.29	□□□□□ -1.08
CPSF7-221	ENST00000543545	PTBP1	P26599	531 aa	Known RBP eCLIP	8.29	□□□□□ -1.08
CPSF7-221	ENST00000543545	ETV6	P41212	452 aa		8.29	□□□□□ -1.08
CPSF7-221	ENST00000543545	LOXL3	P58215	753 aa		8.29	□□□□□ -1.08
CPSF7-221	ENST00000543545	TAS2R46	P59540	309 aa		8.29	□□□□□ -1.08
CPSF7-221	ENST00000543545	ZNF45	Q02386	682 aa		8.29	□□□□□ -1.08
CPSF7-221	ENST00000543545	GNMT	Q14749	295 aa		8.29	□□□□□ -1.08
CPSF7-221	ENST00000543545	RUSC1-AS1	Q66K80	236 aa		8.29	□□□□□ -1.08
CPSF7-221	ENST00000543545	BRD3OS	Q6XYD6	125 aa		8.29	□□□□□ -1.08
CPSF7-221	ENST00000543545		Q6ZS49	121 aa		8.29	□□□□□ -1.08
CPSF7-221	ENST00000543545		Q8N402	240 aa		8.29	□□□□□ -1.08
CPSF7-221	ENST00000543545	OR10X1	Q8NGY0	326 aa		8.29	□□□□□ -1.08
CPSF7-221	ENST00000543545	OR9G1	Q8NH87	305 aa		8.29	□□□□□ -1.08
CPSF7-221	ENST00000543545	ZNF596	Q8TC21	504 aa		8.29	□□□□□ -1.08
CPSF7-221	ENST00000543545	SMIM4	Q8WVI0	70 aa		8.29	□□□□□ -1.08
CPSF7-221	ENST00000543545	THAP7	Q9BT49	309 aa	Predicted RBP	8.29	□□□□□ -1.08
CPSF7-221	ENST00000543545	NECAP2	Q9NVZ3	263 aa		8.29	□□□□□ -1.08
CPSF7-221	ENST00000543545	TMEM160	Q9NX00	188 aa		8.29	□□□□□ -1.08
CPSF7-221	ENST00000543545	OR1A1	Q9P1Q5	309 aa		8.29	□□□□□ -1.08
CPSF7-221	ENST00000543545	ZNF69	Q9UC07	566 aa		8.29	□□□□□ -1.08
CPSF7-221	ENST00000543545	MTFP1	Q9UDX5	166 aa		8.29	□□□□□ -1.08
CPSF7-221	ENST00000543545	CDC42EP3	Q9UKI2	254 aa		8.29	□□□□□ -1.08
CPSF7-221	ENST00000543545	NUP50	Q9UKX7	468 aa		8.29	□□□□□ -1.08
CPSF7-221	ENST00000543545	PSG11	Q9UQ72	335 aa		8.29	□□□□□ -1.08
CPSF7-221	ENST00000543545	FAM96B	Q9Y3D0	163 aa		8.29	□□□□□ -1.08
CPSF7-221	ENST00000543545	RBM7	Q9Y580	266 aa	Known RBP	8.29	□□□□□ -1.08
CPSF7-221	ENST00000543545	IGKV1-6	A0A0C4DH72	117 aa		8.28	□□□□□ -1.08
CPSF7-221	ENST00000543545	ZNF736	B4DX44	427 aa	Predicted RBP	8.28	□□□□□ -1.08
CPSF7-221	ENST00000543545		J3QR06	171 aa		8.28	□□□□□ -1.08
CPSF7-221	ENST00000543545	HAX1	O00165	279 aa		8.28	□□□□□ -1.08
CPSF7-221	ENST00000543545	NPFF	O15130	113 aa		8.28	□□□□□ -1.08
CPSF7-221	ENST00000543545	GSTZ1	O43708	216 aa	Predicted RBP	8.28	□□□□□ -1.08
CPSF7-221	ENST00000543545	YPEL1	O60688	119 aa		8.28	□□□□□ -1.08
CPSF7-221	ENST00000543545	IFNA6	P05013	189 aa		8.28	□□□□□ -1.08
CPSF7-221	ENST00000543545	CDK10	Q15131	360 aa		8.28	□□□□□ -1.08
CPSF7-221	ENST00000543545	MORN2	Q502X0	79 aa		8.28	□□□□□ -1.08
CPSF7-221	ENST00000543545	KLF17	Q5JT82	389 aa	Predicted RBP	8.28	□□□□□ -1.08
CPSF7-221	ENST00000543545	UTF1	Q5T230	341 aa		8.28	□□□□□ -1.08
CPSF7-221	ENST00000543545	TRIQK	Q629K1	86 aa		8.28	□□□□□ -1.08
CPSF7-221	ENST00000543545	HCP5	Q6MZN7	132 aa		8.28	□□□□□ -1.08
CPSF7-221	ENST00000543545	LINC00299	Q6ZSB3	139 aa		8.28	□□□□□ -1.08
CPSF7-221	ENST00000543545	GDPD1	Q8N9F7	314 aa		8.28	□□□□□ -1.08
CPSF7-221	ENST00000543545	OR2AK2	Q8NG84	335 aa		8.28	□□□□□ -1.08
CPSF7-221	ENST00000543545	OR11H6	Q8NGC7	330 aa		8.28	□□□□□ -1.08
CPSF7-221	ENST00000543545	OR5AP2	Q8NGF4	316 aa		8.28	□□□□□ -1.08
CPSF7-221	ENST00000543545	S100Z	Q8WXG8	99 aa		8.28	□□□□□ -1.08
CPSF7-221	ENST00000543545	C22orf15	Q8WYQ4	148 aa		8.28	□□□□□ -1.08
CPSF7-221	ENST00000543545	SNAPC3	Q92966	411 aa		8.28	□□□□□ -1.08
CPSF7-221	ENST00000543545	YPEL2	Q96QA6	119 aa		8.28	□□□□□ -1.08
CPSF7-221	ENST00000543545	CABLES2	Q9BTV7	478 aa		8.28	□□□□□ -1.08
CPSF7-221	ENST00000543545	RDH8	Q9NYR8	311 aa		8.28	□□□□□ -1.08
CPSF7-221	ENST00000543545	EHF	Q9NZC4	300 aa		8.28	□□□□□ -1.08
CPSF7-221	ENST00000543545	F8	P00451	2351 aa		8.28	□□□□□ -1.08
CPSF7-221	ENST00000543545	WNK2	Q9Y3S1	2297 aa		8.28	□□□□□ -1.08
CPSF7-221	ENST00000543545	HIVEP2	P31629	2446 aa		8.28	□□□□□ -1.08
CPSF7-221	ENST00000543545	MAST4	O15021	2626 aa		8.27	□□□□□ -1.09
CPSF7-221	ENST00000543545		A0A087X0M5	115 aa		8.27	□□□□□ -1.09
CPSF7-221	ENST00000543545	TRBV6-7	A0A0A0MS04	114 aa		8.27	□□□□□ -1.09
CPSF7-221	ENST00000543545		A0A1B0GX30	115 aa		8.27	□□□□□ -1.09
CPSF7-221	ENST00000543545		M0QYG6	137 aa		8.27	□□□□□ -1.09
CPSF7-221	ENST00000543545	DIRAS3	O95661	229 aa		8.27	□□□□□ -1.09
CPSF7-221	ENST00000543545	CSF1	P09603	554 aa		8.27	□□□□□ -1.09
CPSF7-221	ENST00000543545	OR5H8	P0DN80	308 aa		8.27	□□□□□ -1.09
CPSF7-221	ENST00000543545	SRD5A1	P18405	259 aa		8.27	□□□□□ -1.09
CPSF7-221	ENST00000543545	NAT1	P18440	290 aa		8.27	□□□□□ -1.09
CPSF7-221	ENST00000543545	EPHA1	P21709	976 aa		8.27	□□□□□ -1.09
CPSF7-221	ENST00000543545	NFYA	P23511	347 aa	Predicted RBP	8.27	□□□□□ -1.09
CPSF7-221	ENST00000543545	IL3RA	P26951	378 aa		8.27	□□□□□ -1.09
CPSF7-221	ENST00000543545	HTR1D	P28221	377 aa		8.27	□□□□□ -1.09
CPSF7-221	ENST00000543545	CD34	P28906	385 aa		8.27	□□□□□ -1.09
CPSF7-221	ENST00000543545	FCGR2C	P31995	323 aa		8.27	□□□□□ -1.09
CPSF7-221	ENST00000543545	HRH1	P35367	487 aa		8.27	□□□□□ -1.09
CPSF7-221	ENST00000543545	RFX2	P48378	723 aa		8.27	□□□□□ -1.09
CPSF7-221	ENST00000543545	TAS2R19	P59542	299 aa		8.27	□□□□□ -1.09
CPSF7-221	ENST00000543545	BPIFB3	P59826	476 aa		8.27	□□□□□ -1.09
CPSF7-221	ENST00000543545	TSPAN5	P62079	268 aa		8.27	□□□□□ -1.09
CPSF7-221	ENST00000543545	SSBP1	Q04837	148 aa	Known RBP	8.27	□□□□□ -1.09
CPSF7-221	ENST00000543545	SCGB2A2	Q13296	93 aa		8.27	□□□□□ -1.09
CPSF7-221	ENST00000543545	HERPUD1	Q15011	391 aa		8.27	□□□□□ -1.09
CPSF7-221	ENST00000543545	ZNF79	Q15937	498 aa		8.27	□□□□□ -1.09
CPSF7-221	ENST00000543545	MIDN	Q504T8	468 aa		8.27	□□□□□ -1.09
CPSF7-221	ENST00000543545	ACTBL2	Q562R1	376 aa		8.27	□□□□□ -1.09
CPSF7-221	ENST00000543545	RNASE10	Q5GAN6	216 aa	Known RBP	8.27	□□□□□ -1.09

Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms