RNA–Protein interactions for RNA: ENST00000543525.3

PPME1-208, Transcript of protein phosphatase methylesterase 1, human

TSL 1 (best)

Gene PPME1, Length 1,928 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPME1-208	ENST00000543525	SLC33A1	O00400	549 aa	Predicted RBP	11.44	□□□□□ -0.58
PPME1-208	ENST00000543525	ZNF14	P17017	642 aa	Predicted RBP	11.44	□□□□□ -0.58
PPME1-208	ENST00000543525	SPINK2	P20155	84 aa		11.44	□□□□□ -0.58
PPME1-208	ENST00000543525	MEOX2	P50222	304 aa		11.44	□□□□□ -0.58
PPME1-208	ENST00000543525	EIF2S3L	Q2VIR3	472 aa	Known RBP	11.44	□□□□□ -0.58
PPME1-208	ENST00000543525	SLC25A24	Q6NUK1	477 aa		11.44	□□□□□ -0.58
PPME1-208	ENST00000543525	ZNF497	Q6ZNH5	498 aa		11.44	□□□□□ -0.58
PPME1-208	ENST00000543525	ISOC2	Q96AB3	205 aa		11.44	□□□□□ -0.58
PPME1-208	ENST00000543525	LOXL4	Q96JB6	756 aa		11.44	□□□□□ -0.58
PPME1-208	ENST00000543525	HIPK2	Q9H2X6	1198 aa		11.44	□□□□□ -0.58
PPME1-208	ENST00000543525	CDH20	Q9HBT6	801 aa		11.44	□□□□□ -0.58
PPME1-208	ENST00000543525	TRAPPC2L	Q9UL33	140 aa		11.44	□□□□□ -0.58
PPME1-208	ENST00000543525	SIRPB1	O00241	398 aa		11.43	□□□□□ -0.58
PPME1-208	ENST00000543525	SRP19	P09132	144 aa	Known RBP	11.43	□□□□□ -0.58
PPME1-208	ENST00000543525	CD200	P41217	278 aa		11.43	□□□□□ -0.58
PPME1-208	ENST00000543525	PPP1CB	P62140	327 aa		11.43	□□□□□ -0.58
PPME1-208	ENST00000543525	ZNF506	Q5JVG8	444 aa		11.43	□□□□□ -0.58
PPME1-208	ENST00000543525	SCCPDH	Q8NBX0	429 aa		11.43	□□□□□ -0.58
PPME1-208	ENST00000543525	SCGB1C1	Q8TD33	95 aa		11.43	□□□□□ -0.58
PPME1-208	ENST00000543525	MALSU1	Q96EH3	234 aa		11.43	□□□□□ -0.58
PPME1-208	ENST00000543525	LIN7C	Q9NUP9	197 aa	Known RBP	11.43	□□□□□ -0.58
PPME1-208	ENST00000543525	RBM7	Q9Y580	266 aa	Known RBP	11.43	□□□□□ -0.58
PPME1-208	ENST00000543525	WSB1	Q9Y6I7	421 aa		11.43	□□□□□ -0.58
PPME1-208	ENST00000543525	SPTBN2	O15020	2390 aa		11.43	□□□□□ -0.58
PPME1-208	ENST00000543525	FREM1	Q5H8C1	2179 aa		11.43	□□□□□ -0.58
PPME1-208	ENST00000543525		A0A1W2PPE2	198 aa		11.43	□□□□□ -0.58
PPME1-208	ENST00000543525	C5orf52	A6NGY3	159 aa		11.43	□□□□□ -0.58
PPME1-208	ENST00000543525	ARGFX	A6NJG6	315 aa		11.43	□□□□□ -0.58
PPME1-208	ENST00000543525	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	11.43	□□□□□ -0.58
PPME1-208	ENST00000543525	SH2D1B	O14796	132 aa		11.43	□□□□□ -0.58
PPME1-208	ENST00000543525	SCAF4	O95104	1147 aa	Known RBP	11.43	□□□□□ -0.58
PPME1-208	ENST00000543525	TNFSF15	O95150	251 aa		11.43	□□□□□ -0.58
PPME1-208	ENST00000543525	OR2C1	O95371	312 aa		11.43	□□□□□ -0.58
PPME1-208	ENST00000543525	OR2H2	O95918	312 aa		11.43	□□□□□ -0.58
PPME1-208	ENST00000543525	HSPB1	P04792	205 aa	Known RBP	11.43	□□□□□ -0.58
PPME1-208	ENST00000543525	MAS1L	P35410	378 aa		11.43	□□□□□ -0.58
PPME1-208	ENST00000543525	UBE2N	P61088	152 aa	Known RBP	11.43	□□□□□ -0.58
PPME1-208	ENST00000543525	RUNX1	Q01196	453 aa		11.43	□□□□□ -0.58
PPME1-208	ENST00000543525	TESK1	Q15569	626 aa		11.43	□□□□□ -0.58
PPME1-208	ENST00000543525	HAGH	Q16775	308 aa		11.43	□□□□□ -0.58
PPME1-208	ENST00000543525	SP5	Q6BEB4	398 aa	Predicted RBP	11.43	□□□□□ -0.58
PPME1-208	ENST00000543525	THNSL2	Q86YJ6	484 aa		11.43	□□□□□ -0.58
PPME1-208	ENST00000543525	SPRR3	Q9UBC9	169 aa		11.43	□□□□□ -0.58
PPME1-208	ENST00000543525	CACNG5	Q9UF02	275 aa		11.43	□□□□□ -0.58
PPME1-208	ENST00000543525	KCNS2	Q9ULS6	477 aa		11.43	□□□□□ -0.58
PPME1-208	ENST00000543525	PPP1R3C	Q9UQK1	317 aa		11.43	□□□□□ -0.58
PPME1-208	ENST00000543525	ATRX	P46100	2492 aa		11.42	□□□□□ -0.58
PPME1-208	ENST00000543525	RNF212B	A8MTL3	300 aa		11.42	□□□□□ -0.58
PPME1-208	ENST00000543525	SYNGR2	O43760	224 aa		11.42	□□□□□ -0.58
PPME1-208	ENST00000543525	ARG1	P05089	322 aa		11.42	□□□□□ -0.58
PPME1-208	ENST00000543525	S100A8	P05109	93 aa		11.42	□□□□□ -0.58
PPME1-208	ENST00000543525	SELE	P16581	610 aa		11.42	□□□□□ -0.58
PPME1-208	ENST00000543525	ERVK11-1	P61568	191 aa		11.42	□□□□□ -0.58
PPME1-208	ENST00000543525	TGFBR3	Q03167	851 aa		11.42	□□□□□ -0.58
PPME1-208	ENST00000543525	TMEM267	Q0VDI3	215 aa	Predicted RBP	11.42	□□□□□ -0.58
PPME1-208	ENST00000543525	ICAM4	Q14773	271 aa		11.42	□□□□□ -0.58
PPME1-208	ENST00000543525	GABRA6	Q16445	453 aa		11.42	□□□□□ -0.58
PPME1-208	ENST00000543525	ZNF766	Q5HY98	468 aa		11.42	□□□□□ -0.58
PPME1-208	ENST00000543525	P4HA3	Q7Z4N8	544 aa		11.42	□□□□□ -0.58
PPME1-208	ENST00000543525	FAM24B	Q8N5W8	94 aa		11.42	□□□□□ -0.58
PPME1-208	ENST00000543525	GMPPA	Q96IJ6	420 aa	Predicted RBP	11.42	□□□□□ -0.58
PPME1-208	ENST00000543525	PSENEN	Q9NZ42	101 aa		11.42	□□□□□ -0.58
PPME1-208	ENST00000543525	TRAV1-1	A0A0B4J248	108 aa		11.41	□□□□□ -0.58
PPME1-208	ENST00000543525	hCG_1809904	A0A1W2PP81	198 aa		11.41	□□□□□ -0.58
PPME1-208	ENST00000543525		A0A1W2PR64	198 aa		11.41	□□□□□ -0.58
PPME1-208	ENST00000543525		A0A1W2PRV1	198 aa		11.41	□□□□□ -0.58
PPME1-208	ENST00000543525		H3BQ15	152 aa		11.41	□□□□□ -0.58
PPME1-208	ENST00000543525	UBE2C	O00762	179 aa		11.41	□□□□□ -0.58
PPME1-208	ENST00000543525	SMPD2	O60906	423 aa		11.41	□□□□□ -0.58
PPME1-208	ENST00000543525	EIF3G	O75821	320 aa	Known RBP eCLIP	11.41	□□□□□ -0.58
PPME1-208	ENST00000543525	NXPH2	O95156	264 aa		11.41	□□□□□ -0.58
PPME1-208	ENST00000543525	IGKV1-39	P01597	117 aa		11.41	□□□□□ -0.58
PPME1-208	ENST00000543525	IGKV1D-39	P04432	117 aa		11.41	□□□□□ -0.58
PPME1-208	ENST00000543525	PGA5	P0DJD9	388 aa		11.41	□□□□□ -0.58
PPME1-208	ENST00000543525	ARG2	P78540	354 aa		11.41	□□□□□ -0.58
PPME1-208	ENST00000543525	S100A12	P80511	92 aa		11.41	□□□□□ -0.58
PPME1-208	ENST00000543525	KHDC3L	Q587J8	217 aa		11.41	□□□□□ -0.58
PPME1-208	ENST00000543525	FIP1L1	Q6UN15	594 aa	Known RBP	11.41	□□□□□ -0.58
PPME1-208	ENST00000543525	WDR86	Q86TI4	376 aa		11.41	□□□□□ -0.58
PPME1-208	ENST00000543525	TMEM178A	Q8NBL3	297 aa		11.41	□□□□□ -0.58
PPME1-208	ENST00000543525	WIPI2	Q9Y4P8	454 aa		11.41	□□□□□ -0.58
PPME1-208	ENST00000543525	SPEG	Q15772	3267 aa		11.41	□□□□□ -0.58
PPME1-208	ENST00000543525	ARHGAP21	Q5T5U3	1957 aa		11.41	□□□□□ -0.58
PPME1-208	ENST00000543525	TRAV39	A0A0B4J263	110 aa		11.41	□□□□□ -0.58
PPME1-208	ENST00000543525		A0A1W2PR80	420 aa		11.41	□□□□□ -0.58
PPME1-208	ENST00000543525	C3orf80	F5H4A9	247 aa		11.41	□□□□□ -0.58
PPME1-208	ENST00000543525		H3BP45	60 aa		11.41	□□□□□ -0.58
PPME1-208	ENST00000543525	IFNA17	P01571	189 aa		11.41	□□□□□ -0.58
PPME1-208	ENST00000543525	IGLV2-14	P01704	120 aa		11.41	□□□□□ -0.58
PPME1-208	ENST00000543525	RAC2	P15153	192 aa		11.41	□□□□□ -0.58
PPME1-208	ENST00000543525	ZNF16	P17020	682 aa	Predicted RBP	11.41	□□□□□ -0.58
PPME1-208	ENST00000543525	UBE2K	P61086	200 aa		11.41	□□□□□ -0.58
PPME1-208	ENST00000543525	RPS23	P62266	143 aa	Known RBP	11.41	□□□□□ -0.58
PPME1-208	ENST00000543525	TGIF1	Q15583	401 aa		11.41	□□□□□ -0.58
PPME1-208	ENST00000543525	IGFBP7	Q16270	282 aa		11.41	□□□□□ -0.58
PPME1-208	ENST00000543525	PLA2G2C	Q5R387	149 aa		11.41	□□□□□ -0.58
PPME1-208	ENST00000543525		Q6ZRM9	215 aa		11.41	□□□□□ -0.58
PPME1-208	ENST00000543525	ZNF429	Q86V71	674 aa		11.41	□□□□□ -0.58
PPME1-208	ENST00000543525	ZNF295-AS1	Q8N0V1	137 aa		11.41	□□□□□ -0.58
PPME1-208	ENST00000543525	PRR18	Q8N4B5	295 aa		11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms